Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0505.Seq
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93395-5|CAE18034.1|  519|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z83112-6|CAE17883.1|  519|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    27   8.3  
U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    27   8.3  

>Z93395-5|CAE18034.1|  519|Caenorhabditis elegans Hypothetical
           protein ZC101.3 protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 258 IRYISYMLSHTRIEFEQPTEEQAESVVAEPDFIFNKPYFFMTLNQY 121
           I YISY L H + E  +  +   +  +    F F +PY F  +  Y
Sbjct: 194 IHYISYCLEHLKGESRKEDDTILKRYLRMMFFAFYQPYLFSLIVLY 239


>Z83112-6|CAE17883.1|  519|Caenorhabditis elegans Hypothetical
           protein ZC101.3 protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 258 IRYISYMLSHTRIEFEQPTEEQAESVVAEPDFIFNKPYFFMTLNQY 121
           I YISY L H + E  +  +   +  +    F F +PY F  +  Y
Sbjct: 194 IHYISYCLEHLKGESRKEDDTILKRYLRMMFFAFYQPYLFSLIVLY 239


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 198 EQAESVVAEP-DFIFNKPYFFMTLNQYNTPGFVGL 97
           + A  V+ EP DF  + P+FF+ L++ N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFFV-LSKDNHPLFVGL 364


>U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical
           protein C30B5.1 protein.
          Length = 706

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 177 AEPDFIFNKPYFFMTLNQYNTP 112
           A P   F+ P+F +  NQ+N+P
Sbjct: 552 AHPPMFFSDPHFLINNNQFNSP 573


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 198 EQAESVVAEP-DFIFNKPYFFMTLNQYNTPGFVGL 97
           + A  V+ EP DF  + P+FF+ L++ N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFFV-LSKDNHPLFVGL 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,241,372
Number of Sequences: 27780
Number of extensions: 180158
Number of successful extensions: 394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)