Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0503.Seq
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 42 8e-05
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 41 1e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.002
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 35 0.007
SPAC664.08c |||traub transciption factor family protein |Schizos... 31 0.085
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 31 0.085
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 31 0.11
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 31 0.11
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.34
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 29 0.34
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 0.34
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.34
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 29 0.45
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.45
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 28 0.79
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 28 0.79
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 28 0.79
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 28 1.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 1.0
SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.0
SPBC12C2.12c |glo1|SPBC21D10.03c|glyoxalase I |Schizosaccharomyc... 28 1.0
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 27 1.4
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 27 1.4
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 27 1.4
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 27 1.4
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 1.4
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.4
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 27 1.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 27 1.8
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 27 1.8
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 27 1.8
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 1.8
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.8
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.8
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 1.8
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 27 1.8
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 2.4
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.4
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 27 2.4
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.4
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 27 2.4
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 3.2
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 26 3.2
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 26 3.2
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 3.2
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 3.2
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 26 3.2
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 3.2
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 3.2
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 26 4.2
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 26 4.2
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 4.2
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 26 4.2
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 26 4.2
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 26 4.2
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 25 5.6
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 25 5.6
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 5.6
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 25 5.6
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 5.6
SPAC4G8.10 |gos1||SNARE Gos1|Schizosaccharomyces pombe|chr 1|||M... 25 5.6
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 25 7.3
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 25 7.3
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.3
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.3
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.3
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 25 7.3
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 25 7.3
SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces pomb... 25 7.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 7.3
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 9.7
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 9.7
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 9.7
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 9.7
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 9.7
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 9.7
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 41.5 bits (93), Expect = 8e-05
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKS-ESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
+ ++ SE+ + D S S + E E S E N S + E+ESS+ + S +S SE
Sbjct: 203 SSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE 262
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGDA 254
+SS KD + +SSN S ++ D+
Sbjct: 263 SESSSKDSD----SSSNSSDSEDDS 283
Score = 34.3 bits (75), Expect = 0.012
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVN 341
++ ++ S +GS S + +SES+ + S + E+ESS+ + S +
Sbjct: 145 DSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSS 204
Query: 340 SGSERKSSGKDEEYSEQNSSNKS 272
S SE +SS + + S +SS++S
Sbjct: 205 SDSESESSSEGSDSSSSSSSSES 227
Score = 28.3 bits (60), Expect = 0.79
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 326
T S+++ T +S + + S+ + KS + ++++ ESST +R+ + R
Sbjct: 325 TSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFTR 384
Query: 325 KSSGKDEEYSEQNSSNKSFNDGD 257
+++ + SFN D
Sbjct: 385 VGDPSQWDFASPALRDNSFNFED 407
Score = 25.4 bits (53), Expect = 5.6
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
++ + SSE S S + E SN + A+SST ++ SE
Sbjct: 289 DSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTN-------STSSE 341
Query: 328 RKSSGKDEEYSE--QNSSNKSFNDGDARLTTK 239
+S KDE+ S+ S + D ++ +TK
Sbjct: 342 ESTSVKDEDSSKIHDKSLKRKHEDDESSTSTK 373
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 41.1 bits (92), Expect = 1e-04
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREK----SESNKKSREFENKEAESSTYRDKNRSVN 341
E+ ++ SE+ + + +S V V ++K SE ++ E +E E+ + D S
Sbjct: 46 ESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDE 105
Query: 340 SGSERKSSGKDEEYSE-QNSSNKSFNDGDARLTTKPNLRRLK 218
S SE +S + EE SE + S++S G + KP K
Sbjct: 106 SESESESESESEEESESEEESDESERSGPSSFLKKPEKEEAK 147
Score = 31.9 bits (69), Expect = 0.064
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSR----EFENKEAESSTYRDKNRSVNSGSE 329
N+ + ++ K+D S S E+S S+ +S E E++E+E + K + + SE
Sbjct: 23 NRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSE 82
Query: 328 RKSSGKDEEYSEQNSSNKSFND 263
S +EE ++ + +D
Sbjct: 83 SDSESSEEEEETESEEDSEVSD 104
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKE-AESSTYRDKNRSVNSGS 332
E ++ SE + K+ + E + SES+++ E E++E +E S + S S
Sbjct: 58 EESESEESEVEVPKKKAVAASEDSESD-SESSEEEEETESEEDSEVSDESESESESESES 116
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDGDARLTTKP 236
E +S ++E + S SF + KP
Sbjct: 117 EEESESEEESDESERSGPSSFLKKPEKEEAKP 148
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 391 NKEAESSTYRDKNRSVNSGSERK-SSGKDEEYSEQNSSNKS 272
+ +AES ++NR +S +++ S +EE SE+ S++ S
Sbjct: 11 DSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSS 51
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER--KSSGK 311
+ K+ K++ S S E SES S E E+ +ES + ++ S S E K+ K
Sbjct: 74 QKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEK 133
Query: 310 DEEYSEQNSSNKSFNDGDA 254
E SE +SS++S + +A
Sbjct: 134 KESSSESSSSSESEEEEEA 152
Score = 36.7 bits (81), Expect = 0.002
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAES---STYRDKNRSVNSGSE 329
++ S + + + ++ V +E +K S+ S E + E+ES S+ ++ V +E
Sbjct: 136 SSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTE 195
Query: 328 RKSSGKDEEYSE-QNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERT 152
K G E S+ ++SS+ S GD+ ++ E KRK + ++E + T
Sbjct: 196 EKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSE--DEKKRKAEPASEERPAKIT 253
Query: 151 K 149
K
Sbjct: 254 K 254
Score = 34.3 bits (75), Expect = 0.012
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
+K E + + + S E SES S E E+ +ESS+ + + E+K S
Sbjct: 77 SKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKES 136
Query: 316 GKDEEYSEQNSSNK 275
+ S ++ +
Sbjct: 137 SSESSSSSESEEEE 150
Score = 29.9 bits (64), Expect = 0.26
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
++ SE+++ + S E SES S E + E+E S SE S
Sbjct: 83 SSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSS 142
Query: 319 S--GKDEEYSEQNSSNKSFNDGDA 254
S ++EE + K + D+
Sbjct: 143 SSESEEEEEAVVKIEEKKESSSDS 166
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 35.1 bits (77), Expect = 0.007
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
+F G NK+ T+TG V + S + ++ + ++ + DK + VNS
Sbjct: 791 LFTLGDNKTEGTETGSMFLGSERVLRKDNSSRNGNEAEDIPARDRKKHKIHDKGKKVNSS 850
Query: 334 S--ERKSSGKDEEYSEQNSSNKSFNDGDARL 248
E+ E+Y SN + + D+ L
Sbjct: 851 KVFEKMGIASMEKYKPPQESNVTKTNSDSTL 881
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 31.5 bits (68), Expect = 0.085
Identities = 24/108 (22%), Positives = 47/108 (43%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
K T +E S + + + E + D+N +V+ E SS + SE+N
Sbjct: 70 KGRKTSRQELLNSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENE--- 126
Query: 274 SFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKK 131
+D + + ++ RLK+I+ K+ ++ L + K L+ K+
Sbjct: 127 --DDDQSSAIPEKDMDRLKKIINGEKKLSDQIRTSALEDMKKGLALKE 172
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 31.5 bits (68), Expect = 0.085
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -2
Query: 433 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 254
+++ +S KK E + +E SST + S + + S+ KD+ SE+ D
Sbjct: 212 KDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQP-SEEEEKTSDIQDRKI 270
Query: 253 RLTTKPNL 230
+ KP+L
Sbjct: 271 KTPIKPSL 278
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
+++ S KK+EK + + KKE +K D +S K+ +KE+ +
Sbjct: 178 KKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKK 227
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K E+ +G ++ S T E E E +KS E + + + +R++ G++ SG
Sbjct: 22 KKVESASGNQETSNVTPTKENEGYEELEKSGEAGAERTKENPFREE-----PGADFDRSG 76
Query: 313 KDEEYSEQNSSNK 275
D++YS + +N+
Sbjct: 77 SDQQYSAEAEANQ 89
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.5 bits (63), Expect = 0.34
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K E + KR+ K +ER+K E +K +E E K + D+ + R+
Sbjct: 639 KKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEE 698
Query: 313 KD--EEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIK 197
K EE + +K + R + +R L E K
Sbjct: 699 KRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAK 739
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 29.5 bits (63), Expect = 0.34
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR--DKNRSVNSG 335
E + S +GK S G V+ KS S + +R+F + + +V+S
Sbjct: 597 EMNGHSLSTVISGKESISSFGAKVDDLKSTSKESARQFGKSALTERLQKLAGNSSNVSSS 656
Query: 334 SERKSSGKDEEYSEQNSSN---KSFNDGDARLTTKPN----LRRLKRILPEIKRKRKKLT 176
+ SS K ++++S K F A +TT N ++R +P IK +
Sbjct: 657 LQTSSSNKSSLLTKKSSFPALLKGFLALPATVTTSANPLGFKSTIQRPIP-IKNNEDSDS 715
Query: 175 QEILTERTKLLSAKKNNLLE*IKVRAATLGIPRSQTNL 62
+ ++ + + K L+ A IP+S TNL
Sbjct: 716 CKAFSQAPPIATKKPPTFLKPNSPEYAKTVIPKSSTNL 753
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 29.5 bits (63), Expect = 0.34
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -2
Query: 466 RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 287
R + + V RE+S +NK E + +DKN+ + E +S ++ S
Sbjct: 1484 RVSNNNSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGE-SNSRQNNAISRAG 1542
Query: 286 SSNKSFNDGDAR 251
SN S D+R
Sbjct: 1543 RSNGSNRGNDSR 1554
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 29.5 bits (63), Expect = 0.34
Identities = 31/150 (20%), Positives = 57/150 (38%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 326
T T S T+ G +D + E + K+ K A + Y + R
Sbjct: 285 TSTISGSITRAGAKDAALHSFRTETVNEVQDTKTDITSEKSALDAYY---------ATLR 335
Query: 325 KSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKL 146
++ E+ + + + +D +TT +L+ +KRK + L + + +
Sbjct: 336 AKQKEESEFMDSENVDDEEDDDFLDVTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRT 395
Query: 145 LSAKKNNLLE*IKVRAATLGIPRSQTNLAE 56
S ++NN L I +T GI T + E
Sbjct: 396 KSIEENNSLPPI---VSTNGITDGDTEMQE 422
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 29.1 bits (62), Expect = 0.45
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGV--TVEREKSESNKK---SREFENKEAESSTYRDKNRSVNSGS 332
+K S + +R S G V +S +K S+++E + SS + K + S
Sbjct: 109 SKKSSNNSSRRSSSSVGKLSNVSNMQSSPSKDPFVSQDYEKESISSSQFSKKYSEGSLKS 168
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLR 227
++ ++ + + +QN+ + S + + + P+L+
Sbjct: 169 QQSNTRSNSVHEKQNTDHASNASSSSSVVSSPSLK 203
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.45
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = -2
Query: 427 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARL 248
+SE NKK E + E + YRD+ E+ + D + NS ++ L
Sbjct: 1059 ESELNKKEAELVIFQKEITEYRDQLHKAFQNPEKTHNINDVKSGPLNSDENIYSTSSTTL 1118
Query: 247 TTKPNLRRLKRI 212
+ +++ LK +
Sbjct: 1119 SILKDVQELKSL 1130
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 28.3 bits (60), Expect = 0.79
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -2
Query: 304 EYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNN 125
+Y + K ND ARL + N R K+++ E RK++++ + ILT+R KK++
Sbjct: 38 KYELKACLTKDRND-KARLN-RENARMRKKVIEE-NRKKEEIEERILTDRILQQERKKSH 94
Query: 124 LLE 116
E
Sbjct: 95 ANE 97
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
+T S+K K +DKKEK+K ++ SE K+ +
Sbjct: 452 ETISEKPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 233 SKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
SKK +K+ KKEK K D + + + +K++ S
Sbjct: 459 SKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKKKKS 496
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESS 371
E N S +TG+ S + ER ++ES+ F E+ESS
Sbjct: 25 EVVQNSDSNIETGQISDSLTKAVEERAETESSSNLSNFTTSESESS 70
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 388 KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRR 224
K A+S+ D +S SE D+E SE + + +ND AR T+ ++
Sbjct: 210 KMAQSTPDLDSLSVPSSESEVSEEESDQEMSEPSPIEEDYNDTKARRITRKGTKK 264
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY---RDKNRSVNSGSERKSSG 314
E++ + + +GVT + SE+ E EN++ + D + S+N + +
Sbjct: 3950 ESEARELESDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNE 4009
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTK 239
+D +EQ S+ +S + ++ L +K
Sbjct: 4010 EDLLETEQKSNEQSAANNESDLVSK 4034
>SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 186 FLFLFISGRILFNLLRFGLVVSRASPSLKDLLLEF 290
F F I IL+N R L +S ASP++ + F
Sbjct: 130 FFFRIIPSHILYNSFRIVLFLSHASPAILHTIFTF 164
>SPBC12C2.12c |glo1|SPBC21D10.03c|glyoxalase I |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 302
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 56 FGQICLTPRNPESCCPYFDS 115
FG IC T N ES C Y +S
Sbjct: 101 FGHICFTVDNIESACAYLES 120
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 27.5 bits (58), Expect = 1.4
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -2
Query: 400 EFENKEAESSTYRDKNRSVNS-GSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRR 224
E ++ + + K+++V S G +RK K E+ S S NDG + P+
Sbjct: 3 ELQDGITQEDSIEKKSKNVASHGEKRKVKRKKEDLSMDGS-----NDG---VKDSPDSND 54
Query: 223 LKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE*IKV 104
+ + K+K KK Q + E L +NNL + +K+
Sbjct: 55 DSQSKKKKKKKLKKSQQPLNEENYPRLQTTENNLQKPLKI 94
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 307 EEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
EEY E +SS F D D +T +P L + + + KRK+ E
Sbjct: 4 EEYIEVSSSPDIFTDDDDMITIEPELNKNPK---DCNSKRKRSVTE 46
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -2
Query: 367 YRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKR 188
Y + N G E + + ++ +S S ++ A +TT P+LR + ++ ++
Sbjct: 177 YEKLDELQNKGEENRDASENSAVKASRNSTVSGSEDSASITT-PSLRMREDVVAYLRADN 235
Query: 187 KKLTQE 170
K L E
Sbjct: 236 KNLQYE 241
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGV-TVE-REKSESNKKSREFE-NKEAESSTYRDKNRSVNSGSERKS 320
S + G +K G +VE R+K +S+ + + ++ + S+Y S S
Sbjct: 67 SGDPYAGMTSDTKKGFNSVESRKKEQSDVRGGDTSYSRRHDDSSYSSNKYSTGGNDSYSS 126
Query: 319 SGKDEEYSEQNSS 281
G++E+YS S
Sbjct: 127 GGRNEDYSTSGGS 139
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTY-----RDKNRSVNSGSERKSSGKDE 305
KR S GV ++EK +S S E ESS++ +D + + S + S ++
Sbjct: 9 KRANSNVGVEKDKEKEKSKGVSNVPNEVETESSSHEPSFKKDVDEEIPSLTAELSEEEEG 68
Query: 304 EYSEQN 287
EYS ++
Sbjct: 69 EYSSES 74
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 436 EREKSESNKKSREFEN---KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 269
+R++ K RE+ + K+ + Y D S S +K S + + Y+E+ + ++S+
Sbjct: 317 KRDRDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDRSY 375
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K+S ++ KR+ SK + +K + KKS+ + ++ + + K R S KS
Sbjct: 132 KTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGL 191
Query: 313 K 311
K
Sbjct: 192 K 192
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -2
Query: 310 DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKK 131
+E +E+ S N+ D D T + +L +KRI + + Q L + L+ +
Sbjct: 11 EEAITEKTSENRRKRDSDVLQTEEVDLSNVKRIRASRNQDNRPERQSRLQRSSSLIEQVR 70
Query: 130 NN 125
N
Sbjct: 71 GN 72
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 293
ERE E+ ++ R ++ ++S RD+ R + +E + K++E E
Sbjct: 253 EREAREAARELRRQQDNAYQASLARDRERQAFARAEEERLAKEKEERE 300
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 27.1 bits (57), Expect = 1.8
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = -2
Query: 418 SNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKDEEYSEQNSSNKSFNDGDARLTT 242
SN ++ A S+Y + + N S SE +S ++EEY E +D D L
Sbjct: 82 SNGHQKDTLENPAIESSYEESEHARNVSDSESITSQEEEEYEE-----LEIDDADRDL-- 134
Query: 241 KPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKN 128
R LP + + LT+E T + L+ K N
Sbjct: 135 ------FDRFLPTVSGEEGDLTEEKTTSLSDLIMQKIN 166
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E + +E K KR+ ++ EK + + E E DKN + S +
Sbjct: 662 EENAKREAEEKA-KREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAP 720
Query: 328 RKSSGKDEEYSEQNSSNK 275
SS + + S+Q ++ +
Sbjct: 721 LASSEANVDTSKQTNATE 738
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -2
Query: 481 TKTGKRDGSKSGVTVEREKSESNK----KSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
T++ R +++ + E S S+ K R N + Y D + S +S E++S
Sbjct: 243 TRSRARSSNEASYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKEKQS-- 300
Query: 313 KDEEYSEQNSSNKSF 269
K E+Y + + S+K+F
Sbjct: 301 KIEKYMKSDKSSKNF 315
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 1.8
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Frame = -2
Query: 460 GSKSGVTVEREKSESNKKSREFENK-EAESSTYRDKNRSVNSGSERKSSGKDEEYS---- 296
GS S ESN + +K + E+ R K + SE +G E +
Sbjct: 165 GSLSSTYGNDSLGESNLEELPTSDKIKGENMGSRKKRKGFVIDSEDSDTGIPREENVTIT 224
Query: 295 --EQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLT 176
+ SSN ++D D + + + R IKRKRK L+
Sbjct: 225 RKTKLSSNILYSDSDTERQSDSGSKNVARQFSRIKRKRKVLS 266
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 1.8
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = -2
Query: 439 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 260
+E K+++ + +RE+ EA + + +N+ E+ + + + SSN S
Sbjct: 561 IETNKAQTEQVNREYSILEATLNALQKQNKQKGEVLEQVVAESEAAKNMVESSNASIQQL 620
Query: 259 DARLTTK-PNLRRLKRILPEIKRKRKKLTQE--ILTERTKLLSAKKNN 125
+ + K L +L L E+ ++ L +E +++R L K NN
Sbjct: 621 KSEVADKEQTLAQLHLQLDEMTQRLVSLDEESKAVSQRKLDLEYKINN 668
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN---SGSE 329
TNK + K K SKS R + ++ +N + R +R + SE
Sbjct: 1120 TNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNPNIRNVPERSSSRFQGIRINYSE 1179
Query: 328 RKSSGKDEEYSEQNSSNKSFND 263
SS ++ E+ S + F++
Sbjct: 1180 APSSSEEISEEEEEISEEDFDE 1201
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -2
Query: 511 FETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS 332
+ T T+ ++ ++ + + +E++K KKS + + + ESS K +
Sbjct: 427 YSTATDAVTKDAEESQEDVEMDIVIEKKK----KKSSKLKEADGESSKKEKKEK--KDKK 480
Query: 331 ERKSSGKDEEYSEQNSSNK 275
+KS K EE + S K
Sbjct: 481 HKKSKRKSEESEDGESPKK 499
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNS 338
+ E KSS+ K + DG S + +K + +KKS+ + + + + K +S S
Sbjct: 450 VIEKKKKKSSKLK--EADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKS 506
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
D + + VE + +KK+K+ + + +DG ++S++EK++
Sbjct: 437 DAEESQEDVEMDIVIEKKKKKSSKLKEADG--ESSKKEKKE 475
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 350
I ++ ETK D + S T REK+E N S+ + +S + +N+
Sbjct: 178 INDSNVENKEETKDRNLDRALSKFTQSREKNEQNLSSKASVLRNKKSILLKKRNQ 232
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/84 (20%), Positives = 40/84 (47%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 290
+RD ++ + +E +S+ ++ R+ N++ S T R+K + + E+++ E
Sbjct: 69 ERDSTQRTLQIESLESKIGEQERDLNNEKLASETLREKTQLL----EKENGALKVENGYL 124
Query: 289 NSSNKSFNDGDARLTTKPNLRRLK 218
++ + A L K N+ + K
Sbjct: 125 YEKSRKLEEEMAHLKKKCNVYKSK 148
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
E E ++++ + ++ E S + + +++ K +S + SSN S ND D
Sbjct: 127 ENEIADNDLEPEVYDILYEEESKLGESRDLIRRLKQKRFETKKNNFSVKESSNLSNNDSD 186
Query: 256 ARL 248
A L
Sbjct: 187 ASL 189
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 263 RRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
R + T +K EK A+ +K + ++NSD Y + +KE V+Q
Sbjct: 155 RPLALSSDTSYQKSEK--AKSEKSPFLSTSKNSDANYSKTTNQKEAEKAVSQ 204
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/60 (20%), Positives = 29/60 (48%)
Frame = -2
Query: 511 FETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS 332
F GT +E+ +GK + + ++ +N ++ FEN++ + + + + + GS
Sbjct: 193 FAAGTAVETESGSGKEKENDKKSSENFDELLANTSAKAFENQKGSAGETKSEPKEADKGS 252
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 430 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 272
E S+++ +FEN+E++ ++ + + K+ K E EQ S K+
Sbjct: 714 EASQNDVSEDDFENEESDDDKIFEQQTKIE--DDVKNENKTEPVEEQKSEEKN 764
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 457 SKSGVTVEREKSE--SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQN 287
SK + ++ E+S+ S + + + ++S D+N + + SE K DEE SE
Sbjct: 733 SKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIA 792
Query: 286 SSNKSFND 263
S F+D
Sbjct: 793 HSEDEFDD 800
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 3.2
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = -2
Query: 496 NKSSETKTGKR-------DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNS 338
++SSE K+ DGS++ + E SE +KK ++ ++KE + + +D+
Sbjct: 143 SESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKK-KSKENDDAPKKDRKTRKKE 201
Query: 337 GSERKSSGKDEEYSEQNSSNKS-FNDGDA 254
RK + E ++ N +N + N DA
Sbjct: 202 EKARKLASMLESENKDNDANAAPLNKTDA 230
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
S + +G GS S T S S+ S + S++Y SGS SSG
Sbjct: 423 SQSSTSGSSSGSSSASTTASSSSVSSGSSIS-SGSSSMSTSYTSA-----SGSSAHSSGS 476
Query: 310 DEEYSEQNSSNKSFN 266
S SS +FN
Sbjct: 477 SSGSSSATSSASTFN 491
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 26.2 bits (55), Expect = 3.2
Identities = 24/99 (24%), Positives = 41/99 (41%)
Frame = -2
Query: 412 KKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPN 233
KKSR K + RD++ + E G E++S + F + D ++ P
Sbjct: 115 KKSRSKTPKREIARRQRDEDEWESDEYEEVVDGSASHPIEEDSVSTDFQNHDYEKSSDPE 174
Query: 232 LRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE 116
RL + R+R++ + + R K L A N +E
Sbjct: 175 TERLNDL-----REREEFEERL---RRKDLEAATNEFVE 205
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 406 SREFENKEAESSTYRDKN--RSVNSGSERKSSGKD 308
++EFENK + ++T +D R N G+ R S D
Sbjct: 520 TKEFENKFSNANTAKDDEPARQTNKGTTRISRSSD 554
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR 362
T ++ SS + + SKS + + S S+ ++ +SS+YR
Sbjct: 143 TTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYR 190
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 25.8 bits (54), Expect = 4.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -2
Query: 439 VEREKSESNKKSREFEN----KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 281
++RE E + SR+F N K ST K R++ +GS ++ K E SE S
Sbjct: 1209 IQREMLEEEQSSRDFVNRTKKKPRGKSTGTRKPRAI-AGSSSSTAVKKEASSESKPS 1264
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.8 bits (54), Expect = 4.2
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSRE-FENKEAESSTYRDKNRSVNSGSERKS 320
+K+ + G R+ S + V +E+ + + F N E ES + SVN + S
Sbjct: 8 SKNFQFSEGSRESSNDELKVLLRDTETKEDEKSSFSNSEEESIIENLSDSSVNKEYAKNS 67
Query: 319 SGKDEEYSEQNSSNKSFND 263
+ SE N D
Sbjct: 68 LKLSDAVSESKYLNPLLKD 86
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQNSS 281
ER S SN+K E+ ST+ + R+++ DE+ + EQ +S
Sbjct: 929 ERAHSYSNRKQASSESSPESQSTHYNDYEGTEDNIVRQTTTVDEDGHQEQTTS 981
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/74 (20%), Positives = 36/74 (48%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
++SS + RD S + ++ + S + ++ + ++ S + DK+ ++S ++
Sbjct: 504 SRSSHRPSVFRDNSVAFGQLDNGNTSSRARDKDADPNKSLSCSVEDKHYDLHSAVAEENE 563
Query: 316 GKDEEYSEQNSSNK 275
DEE S+N+
Sbjct: 564 EVDEELLNVPSNNQ 577
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 25.8 bits (54), Expect = 4.2
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = -2
Query: 394 ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKR 215
ENK+A D N S S+ ++ + K + DA + +RR K+
Sbjct: 2 ENKDALDIGKDDTNTSEADVSKNETQEQPVLSKSALKRLKRQQEWDAGREKRAEMRREKK 61
Query: 214 ILPEIKRKRKKLTQEILTERTKLLSAKK 131
L + +RKRK E++ + K + K
Sbjct: 62 RLRKEERKRKIEAGEVVKSQKKRIRLGK 89
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 439 VEREKSESNKKSREFENKEA-ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
V + K E ++ E A + ++++ +V E K KD++ SSNK+ +
Sbjct: 318 VHKSKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQKKEGITSSNKNDDS 377
Query: 262 GD 257
G+
Sbjct: 378 GN 379
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
++++ KK +++ + ++ RS + S+ K DE+ E ++NK+ +D
Sbjct: 38 KKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSD 95
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 5.6
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSES-----NKKSREFENKEAESSTYRDKNRSVN 341
T ++ SSE+ + ++ K ++ + E S E + AES D+ S
Sbjct: 43 TTSSGSSESDSMSQNDKKKDSSLNESEDEDFAGFGESASENDELESAESEAENDEESSSQ 102
Query: 340 SGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRK 191
+ ++S + ++ ++ + K F D + + + R K + +RK
Sbjct: 103 KSNSKESHAQRKKLQKERKAMKPFADTSLKAKSLWDKLRQKTSIKAEERK 152
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = -1
Query: 236 KSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
+++K E + +KE++K + + G Y S+++KEQ +
Sbjct: 286 EARKEEARLKKKEKERKKKEEMKAQGKY-LSKKQKEQQA 323
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 394 ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 254
E++E E S + R + + +DEE S+ S F+DG+A
Sbjct: 373 EDEELEDSEDEEFARQQLLSRKEEEEEEDEEASDFEDSFADFSDGEA 419
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = -2
Query: 403 REFENKEAES---STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG--DARLTTK 239
+E N++A+S S +D S+N+ +S+ E E KS+++ + +T
Sbjct: 945 KEANNEQAQSISRSLIKDSEGSINTNETLESTSIVNEIEESAVQTKSYSESMWNKTVTMF 1004
Query: 238 PNLRRL 221
P+L+ L
Sbjct: 1005 PSLQEL 1010
>SPAC4G8.10 |gos1||SNARE Gos1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 5.6
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -2
Query: 295 EQNSSNKSFNDGDARLTTKPNLRRLKR-------ILPEIKRKRKKLTQEILTERTKLLSA 137
E+ +S+ ND + T K + RLKR +L + K++ L+ E L + L
Sbjct: 39 EEANSSADENDSHSMATIKSHFERLKRDEQLLNGVLKKYDAKQEVLSPEELRDAQNFLEM 98
Query: 136 KKNNLLE 116
++ N L+
Sbjct: 99 QEANSLD 105
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 25.0 bits (52), Expect = 7.3
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = -2
Query: 511 FETGTNKSSETKTGKRDG-SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
F +N S K K+D S V S+ + ENK+ ESS+ V++
Sbjct: 24 FPNASNDSVHDKPVKQDEQSNPNVREAIANSDGQESLAVKENKDTESSSSHFVPNGVSNS 83
Query: 334 SERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNL 230
+RK D + F+ R+T KP++
Sbjct: 84 KKRKLVATDLDV--------DFDISSVRVTEKPSV 110
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 260 RCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
R A ++S+ + +KEKE+T + + G+++ E + SR
Sbjct: 117 RSIAHSTSRSRSTSPANRHRRKEKERTRSNHRHGSHRRHEPYRTHLSR 164
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
EREK ESN S + E+ + ++T S N+ S+ + ++ Y + S K
Sbjct: 45 EREKVESNPNSSDEEDLTSTNNT----RSSDNTTSDTEDDSGEDSYQVEWESGK 94
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 25.0 bits (52), Expect = 7.3
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = -2
Query: 364 RDKNRSVNSGSERKSSGKD--EEYS----EQNSSNKSFNDGDARLTTKPNLRRLKRILPE 203
+D+N V E D EE+ E+ + N + KP LR +K +LP
Sbjct: 742 QDENDQVTKVEEEHMEDDDSVEEFDPIIEERQRMKRKANRPANIIPPKPKLRTVKTLLPA 801
Query: 202 IKRKRKKLTQEILTERTK 149
K + + + ++E K
Sbjct: 802 FKEQVYPILHKFVSENEK 819
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 25.0 bits (52), Expect = 7.3
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDEEYSEQNSSN 278
KSG + E ++ +K + + KE + + + + E ++G+ + E
Sbjct: 95 KSGPSKIDEFTDKKEKKKIAKRKEKRERDWNEIEENFEDKTWEADTTGQFIQI-ESRKKR 153
Query: 277 KSFNDGDARLTTKPNLRRLKRI---LPEIKRKRKKLTQEI 167
K+ D A L TKP+ + LPE+K K K + +
Sbjct: 154 KNSPDPWANLQTKPSFGETVQAPPELPELKIKETKYLENV 193
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 376 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
SS +RS S S++ YSE+NSSN
Sbjct: 166 SSQQPPNDRSTLSSSQKAKRPLKRSYSEKNSSN 198
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 263 RRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 129
++ + D T K+ +S+ D + + N+DG + TSE E
Sbjct: 482 QKTNQDAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNTSENADE 526
>SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 430 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 287
EK++S S E E AE+S DKN +E ++ DE+ Q+
Sbjct: 175 EKTKS-PISNENEKSAAETSIKEDKNGDAAKKNEGSANQDDEKLHSQS 221
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = -1
Query: 239 TKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
T+ ++++KN +KEK++ +T+ + T K ++ K+Q + +N+
Sbjct: 1352 TQLEELKKNCEALEKEKQELETKLQE-TAKETDTFKQQVNSLNE 1394
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 409 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
K + +NK + KN + NS + RK++ EYS N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 409 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
K + +NK + KN + NS + RK++ EYS N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 326
T T ++SE + R + + + E + FE+ + S+Y + + R
Sbjct: 135 TVTPQTSERRRETRRHQNNQHSQQYSSQERSSSYNNFEDASSPQSSYHTPTKRRKNAVPR 194
Query: 325 KSSG---KDEEYSEQNSSNKSFNDGDARL 248
KSS +++ Q++ + ++RL
Sbjct: 195 KSSSPPLSSTKHAPQSTERRPVRRSESRL 223
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = -2
Query: 439 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE-RKSSGKDEEYSEQNSSNKSFND 263
+EREK E++K+ + KEAE ++ R + E KS G + + +++
Sbjct: 433 LEREKDEASKERLKAARKEAEQ--VEEETRPIREKYELEKSRGSELQDAKRRLDELKAKA 490
Query: 262 GDARLTTKPNLRR-LKRI-LPEIKRKRKKLTQE 170
DA L LK +P+++++ + L Q+
Sbjct: 491 EDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQ 523
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 409 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
K + +NK + KN + NS + RK++ EYS N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 409 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
K + +NK + KN + NS + RK++ EYS N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,837,086
Number of Sequences: 5004
Number of extensions: 34021
Number of successful extensions: 317
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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