Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0503.Seq
(548 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 29 0.13
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.23
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 27 0.54
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 25 1.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 1.2
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 2.2
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 2.9
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 24 3.8
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 8.8
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 8.8
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.13
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 358 KNRSVNSGSERKSS-GKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
K + + +ER+S+ K +++ +S KSF A T R +R E KR R
Sbjct: 103 KAKEPKAKAERQSTLRKRPKFTVIDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI 162
Query: 181 LTQEILTERTKLLSAKKNNLLE*IK 107
T+E + + +LL + E IK
Sbjct: 163 RTEEYIPTQEELLEEAEITERENIK 187
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.9 bits (59), Expect = 0.23
Identities = 14/87 (16%), Positives = 36/87 (41%)
Frame = -2
Query: 466 RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 287
R+ ++ + E+E+ ++ RE KE R+K +R+ ++ E E+
Sbjct: 459 REAREAAIEREKERELREQREREQREKEQREKEQREKEE--RERQQREKEQREREQREKE 516
Query: 286 SSNKSFNDGDARLTTKPNLRRLKRILP 206
++ + + + R+ ++P
Sbjct: 517 REREAARERERERERERERERMMHMMP 543
Score = 23.4 bits (48), Expect = 5.0
Identities = 8/42 (19%), Positives = 21/42 (50%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
+ + ++ + R+K+++EK + + ERE+ + R
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKER 517
Score = 23.4 bits (48), Expect = 5.0
Identities = 8/43 (18%), Positives = 22/43 (51%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
+ + + K+ + R+K+E+E+ + E+E+E+ +
Sbjct: 479 EREQREKEQREKEQREKEERERQQREKEQREREQREKEREREA 521
Score = 22.6 bits (46), Expect = 8.8
Identities = 9/47 (19%), Positives = 22/47 (46%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
R + + + + K+ + R+K+++E+ ERE+E+
Sbjct: 483 REKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERER 529
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 26.6 bits (56), Expect = 0.54
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
+ + K+G R S+SG R S +SR + S + +R + S +
Sbjct: 1136 SQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRS-GSGSRQASPISRKSV 1194
Query: 319 SGKDEE 302
SG + E
Sbjct: 1195 SGSESE 1200
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
K VER + + + F+ K+ + RD+ R S ++ S +SS+
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467
Query: 274 S 272
S
Sbjct: 468 S 468
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
K VER + + + F+ K+ + RD+ R S ++ S +SS+
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467
Query: 274 S 272
S
Sbjct: 468 S 468
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 24.6 bits (51), Expect = 2.2
Identities = 12/54 (22%), Positives = 26/54 (48%)
Frame = -2
Query: 358 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIK 197
+N ++ G + G+ ++++ N F D D +T K + L+ + E+K
Sbjct: 51 RNWAIRFGVDLWEFGR--QFTKVNDIRNRFKDSDVDVTRKDGILLLRELAAEVK 102
Score = 23.8 bits (49), Expect = 3.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 409 KSREFENKEAESSTYRDKNRSVNSGSER 326
K + + E STYRDK+ S ++ E+
Sbjct: 699 KDADGNGEGTEESTYRDKDESFDTPEEQ 726
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.2 bits (50), Expect = 2.9
Identities = 17/95 (17%), Positives = 42/95 (44%)
Frame = -2
Query: 481 TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 302
T K ++ + KS+ +K RE +E + R+ + + ER+ S ++E
Sbjct: 1504 TNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVNSLDDLERRLSAAEKE 1563
Query: 301 YSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIK 197
+ + + + +A+ N+R ++ L +++
Sbjct: 1564 LEDAQLTKRLSSLVEAKNIQNQNIRSYQKELADLR 1598
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.8 bits (49), Expect = 3.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKL 146
+++ E N N ++ D RL + + R L + ++ KKL QE+LT +L
Sbjct: 718 REQLQRELNELNSAYAKEDERL------QEMTRKLHQRQQHMKKLQQELLTNEQQL 767
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 8.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 286 SSVHCTPRLYRNSCVPSHCSLTDSYP 363
SS HCT + + SC + LT P
Sbjct: 40 SSAHCTQQTRQASCSDNAAQLTYRLP 65
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 22.6 bits (46), Expect = 8.8
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +1
Query: 319 NSCVPSHCSLTDS---YPYRSKIQLLYFQIHDFSCWIRIFPFRL*RRSSSHHACLSSFLM 489
N+C + S +S + + K L FQ+ F WI+I + R +
Sbjct: 1480 NACKAENYSWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRDVGKQPIRET--N 1537
Query: 490 IYWFLSRIFIVSILSLF 540
IY +L +F + S F
Sbjct: 1538 IYMYLYFVFFIIFGSFF 1554
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,961
Number of Sequences: 2352
Number of extensions: 6534
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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