Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0503.Seq
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 43 2e-04
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 40 8e-04
At2g22795.1 68415.m02704 expressed protein 40 0.001
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 39 0.002
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 39 0.003
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 38 0.004
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 38 0.004
At5g53800.1 68418.m06685 expressed protein 38 0.006
At3g28770.1 68416.m03591 expressed protein 37 0.010
At5g53930.1 68418.m06710 expressed protein 36 0.013
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 36 0.018
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 36 0.024
At4g31880.1 68417.m04531 expressed protein 36 0.024
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 36 0.024
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 36 0.024
At1g03080.1 68414.m00282 kinase interacting family protein simil... 36 0.024
At5g41020.1 68418.m04986 myb family transcription factor contain... 35 0.031
At5g24290.2 68418.m02858 integral membrane family protein contai... 35 0.031
At5g24290.1 68418.m02857 integral membrane family protein contai... 35 0.031
At3g29075.1 68416.m03637 glycine-rich protein 35 0.031
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 35 0.041
At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) fami... 35 0.041
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 35 0.041
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 35 0.041
At4g39190.1 68417.m05549 expressed protein ; expression support... 34 0.054
At3g59800.1 68416.m06673 expressed protein 34 0.054
At5g16500.1 68418.m01928 protein kinase family protein contains ... 34 0.072
At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong sim... 34 0.072
At1g29950.2 68414.m03661 expressed protein 34 0.072
At1g29950.1 68414.m03660 expressed protein 34 0.072
At4g26630.1 68417.m03837 expressed protein 33 0.095
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 33 0.13
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 33 0.13
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 33 0.13
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 33 0.13
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 33 0.13
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 33 0.13
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 33 0.13
At1g56660.1 68414.m06516 expressed protein 33 0.13
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 33 0.17
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 33 0.17
At5g60030.1 68418.m07527 expressed protein 32 0.22
At4g26190.1 68417.m03770 expressed protein 32 0.22
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 32 0.22
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 32 0.29
At4g15030.1 68417.m02309 expressed protein 32 0.29
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 32 0.29
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 32 0.29
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 32 0.29
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 31 0.38
At4g17150.1 68417.m02581 expressed protein 31 0.38
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 31 0.38
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 0.38
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 31 0.38
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 31 0.38
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 31 0.51
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 31 0.51
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 31 0.51
At1g76820.1 68414.m08939 expressed protein 31 0.51
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 31 0.51
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 31 0.51
At1g08760.1 68414.m00975 expressed protein similar to At1g21030,... 31 0.51
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 31 0.67
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 31 0.67
At5g47690.1 68418.m05887 expressed protein 31 0.67
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 31 0.67
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 31 0.67
At3g58840.1 68416.m06558 expressed protein 31 0.67
At3g52220.1 68416.m05737 expressed protein 31 0.67
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 31 0.67
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 31 0.67
At1g35660.1 68414.m04432 expressed protein 31 0.67
At1g32810.1 68414.m04044 expressed protein 31 0.67
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.67
At5g64910.1 68418.m08165 expressed protein ; expression support... 30 0.89
At5g37010.1 68418.m04438 expressed protein 30 0.89
At4g35080.2 68417.m04981 high-affinity nickel-transport family p... 30 0.89
At4g35080.1 68417.m04980 high-affinity nickel-transport family p... 30 0.89
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 30 0.89
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 30 1.2
At5g25790.1 68418.m03061 tesmin/TSO1-like CXC domain-containing ... 30 1.2
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 30 1.2
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 30 1.2
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 30 1.2
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 29 1.5
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 29 1.5
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 29 1.5
At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein ... 29 1.5
At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.5
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 29 1.5
At5g64810.1 68418.m08150 WRKY family transcription factor contai... 29 2.0
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 29 2.0
At5g12230.1 68418.m01435 expressed protein 29 2.0
At5g05240.1 68418.m00560 expressed protein similar to unknown pr... 29 2.0
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 29 2.0
At3g48120.1 68416.m05248 expressed protein 29 2.0
At5g53440.1 68418.m06641 expressed protein 29 2.7
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 29 2.7
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 29 2.7
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative... 29 2.7
At4g35940.1 68417.m05113 expressed protein 29 2.7
At4g00480.1 68417.m00066 myc-related transcription factor (MYC1)... 29 2.7
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 2.7
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 29 2.7
At2g33480.1 68415.m04104 no apical meristem (NAM) family protein... 29 2.7
At1g79200.1 68414.m09234 expressed protein 29 2.7
At1g73960.1 68414.m08565 expressed protein similar to TATA bindi... 29 2.7
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 29 2.7
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 29 2.7
At1g21390.1 68414.m02676 expressed protein 29 2.7
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 29 2.7
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 28 3.6
At5g27860.1 68418.m03342 expressed protein 28 3.6
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 28 3.6
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 28 3.6
At1g70505.1 68414.m08114 expressed protein 28 3.6
At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing ... 28 3.6
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 28 3.6
At5g50840.2 68418.m06299 expressed protein 28 4.7
At5g50840.1 68418.m06298 expressed protein 28 4.7
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 28 4.7
At5g43130.1 68418.m05265 transcription initiation factor IID (TF... 28 4.7
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 28 4.7
At2g28150.1 68415.m03419 expressed protein 28 4.7
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 28 4.7
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 28 4.7
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 27 6.2
At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-... 27 6.2
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 27 6.2
At5g05050.1 68418.m00536 peptidase C1A papain family protein wea... 27 6.2
At4g40020.1 68417.m05666 hypothetical protein 27 6.2
At3g58050.1 68416.m06471 expressed protein 27 6.2
At3g23540.1 68416.m02962 expressed protein ; expression supporte... 27 6.2
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 6.2
At2g32250.2 68415.m03942 far-red impaired responsive protein, pu... 27 6.2
At2g32250.1 68415.m03941 far-red impaired responsive protein, pu... 27 6.2
At1g69280.1 68414.m07943 expressed protein 27 6.2
At1g61040.1 68414.m06872 plus-3 domain-containing protein contai... 27 6.2
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 27 6.2
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 27 6.2
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 27 6.2
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 27 6.2
At1g16220.1 68414.m01942 protein phosphatase 2C family protein /... 27 6.2
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 27 6.2
At5g66950.1 68418.m08440 expressed protein 27 8.3
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 27 8.3
At5g63550.1 68418.m07976 expressed protein 27 8.3
At5g58880.1 68418.m07377 hypothetical protein 27 8.3
At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative 27 8.3
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 27 8.3
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 27 8.3
At5g44690.1 68418.m05476 hypothetical protein 27 8.3
At4g09890.1 68417.m01620 expressed protein 27 8.3
At3g61380.1 68416.m06869 expressed protein 27 8.3
At3g45400.1 68416.m04901 exostosin family protein contains Pfam ... 27 8.3
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 27 8.3
At3g12010.1 68416.m01488 expressed protein contains Prosite PS00... 27 8.3
At3g11590.1 68416.m01416 expressed protein 27 8.3
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 27 8.3
At3g09450.1 68416.m01123 hypothetical protein 27 8.3
At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 27 8.3
At2g35210.1 68415.m04319 human Rev interacting-like family prote... 27 8.3
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 27 8.3
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 27 8.3
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 8.3
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 27 8.3
At1g63420.1 68414.m07172 expressed protein 27 8.3
At1g22882.1 68414.m02857 expressed protein 27 8.3
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = -2
Query: 490 SSETKTGK-RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
+ +TKTG+ ++ K + E S+ + +E EN + E T DK +SV +R
Sbjct: 281 AKDTKTGRAKNNIKKQTDTKTESSDDDDDEKE-ENSKTEKKTVADKKKSVADFLKRIKKN 339
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERT--KLLS 140
++ E S N+ NDG+ + K N + K+ +K++ K+ L T K +
Sbjct: 340 SPQKGKETTSKNQKKNDGNVK---KENDHQ-KKSDGNVKKENSKVKPRELRSSTGKKKVE 395
Query: 139 AKKNN 125
+ NN
Sbjct: 396 VENNN 400
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSG--VTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
+T T S + K + SK+ +++KS ++ R +N + KN+ N G
Sbjct: 298 DTKTESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQKKNDG 357
Query: 334 SERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLK----RILPEIKRKRKKLTQEI 167
+ +K + ++ S+ N ++ L + ++++ KRK+ K T E+
Sbjct: 358 NVKKENDHQKK-SDGNVKKENSKVKPRELRSSTGKKKVEVENNNSKSSSKRKQTKETAEV 416
Query: 166 LTERTKLLSAK 134
T + S K
Sbjct: 417 ATGKRGRESGK 427
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/113 (24%), Positives = 50/113 (44%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
E + G+RD + ++ ++SRE N+E++ RD R G ERK K+
Sbjct: 176 EREDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKE--KER 233
Query: 304 EYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKL 146
E S SS + + + K E++ ++KKL +E+ R ++
Sbjct: 234 EKSVGRSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRV 286
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKR--DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
+ G+ K E K+ S S +R+ E +K +E E + RDK+R
Sbjct: 38 DKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR----RDKDRVKRRS 93
Query: 334 SERKSSGKDEEYSEQNSSNK 275
RKSS +++ E++ +K
Sbjct: 94 ERRKSSDSEDDVEEEDERDK 113
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Frame = -2
Query: 547 VTKIEKGY*R*IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFEN-KEAESS 371
V + E+G+ + G ++ + + +R + +RE+ E ++ RE E KE E
Sbjct: 116 VNEKERGHREHERDRGKDRKRDREREERKDKEREREKDRERREREREEREKERVKERERR 175
Query: 370 TYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRK 191
D R + + S ++ E +D D K +L+R ++ E K K
Sbjct: 176 EREDGERDRREREKERGSRRNRERERSREVGNEESDDD----VKRDLKRRRKEGGERKEK 231
Query: 190 RKK 182
++
Sbjct: 232 ERE 234
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 263 RRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
R D + + ++ E+ KE+E+ + DG EREKE+ SR N+
Sbjct: 148 REREKDRERREREREEREKERVKERERRE--REDGERDRREREKERGSRRNR 197
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
R+R + K K+ E+ R+++E+E+ + R + + RE+E R
Sbjct: 134 RKRDREREERKDKEREREKDRERRERER-EEREKERVKERERREREDGER 182
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/81 (24%), Positives = 44/81 (54%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
ET T + E+ + + K +E+E+S ++++E EN++ E ++++ S E
Sbjct: 562 ETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIE----KEESASQEETKE 617
Query: 328 RKSSGKDEEYSEQNSSNKSFN 266
+++ K++E S N S ++ N
Sbjct: 618 KETETKEKEESSSNESQENVN 638
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 472 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE--RKSSGKDEEY 299
G + KSG T E E E + EN+++ S + + N G+E R+ SG +E
Sbjct: 195 GTEENEKSG-TEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESE 253
Query: 298 SEQNSSNKSFNDGD 257
E+ N S + +
Sbjct: 254 VEEKKDNGSSEESE 267
Score = 31.5 bits (68), Expect = 0.38
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSK-SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-S 332
T N+ S T+ + + K +G T E EKS + + E E KE + +K+ S S
Sbjct: 174 TEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVE-ERKENGGTEENEKSGSEESEVE 232
Query: 331 ERKSSGKDEEYSEQNSSNKS 272
E+K +G EE E++ + +S
Sbjct: 233 EKKDNGGTEESREKSGTEES 252
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSK-SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-S 332
T N+ S T+ + + K +G T E EKS S + E + + R+K+ + S
Sbjct: 196 TEENEKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVE 255
Query: 331 ERKSSGKDEEYS-EQNSSNKSFNDGD 257
E+K +G EE E+ N+ ++ +
Sbjct: 256 EKKDNGSSEESEVEEKKENRGIDESE 281
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKS--ESNKKSREFENKEAESSTYRDK--NRSVN 341
E ++ SE + K +G G REKS E ++ + +N +E S +K NR ++
Sbjct: 222 EKSGSEESEVEEKKDNG---GTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGID 278
Query: 340 SGSERKSSGKDEEYSEQNSSNKSFNDGDA 254
E K DE+ + + + ++ DA
Sbjct: 279 ESEESKEKDIDEKANIEEARENNYKGDDA 307
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESN----KKSREFENKE-AESSTYRDKNRSV 344
ET T + E+ + + K +E+E E++ K E E KE ESS+ +
Sbjct: 524 ETETKDNEESSSQEETKDKENEKIEKE--EASSQEESKENETETKEKEESSSQEETKEKE 581
Query: 343 NSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTK 239
N E++ S EE E+ + + ++ TK
Sbjct: 582 NEKIEKEESAPQEETKEKENEKIEKEESASQEETK 616
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSK-SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-S 332
T N+ S T+ + + K +G T E EKS + + E E K+ + +K+ + S
Sbjct: 152 TEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVE-ERKDNGGTEENEKSGTEESEVE 210
Query: 331 ERKSSGKDEEYSEQNSSNKS 272
ERK +G EE +E++ S +S
Sbjct: 211 ERKENGGTEE-NEKSGSEES 229
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
++ S++ K+ +K EKE+ ++ +T +EKE+SS
Sbjct: 532 ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESS 572
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T + K K + + T E+E +E+ +K N+ E+ + + +E+K+
Sbjct: 596 TKEKENEKIEKEESASQEETKEKE-TETKEKEESSSNESQENVNTESEKKEQVEENEKKT 654
Query: 319 SGKDEEYSEQNS 284
E S++NS
Sbjct: 655 DEDTSESSKENS 666
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
+ S++ K + K+KE++ ++ +T +EKE+SS
Sbjct: 421 EVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESS 461
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFE--NKEAESSTYRDKNRSVNSGS 332
TG ++ K GK + +R+KSES K+ E E KEA ST +++ R S S
Sbjct: 715 TGKEENETDKHGKMKKER-----KRKKSESKKEGGEGEETQKEANESTKKERKRK-KSES 768
Query: 331 ERKSSGKDEEYSEQNSSNK 275
+++S G++E E + S K
Sbjct: 769 KKQSDGEEETQKEPSESTK 787
Score = 36.3 bits (80), Expect = 0.013
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVE-REKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKS 320
K + K GK + V +E++E++K + + E K +S + ++ + E
Sbjct: 696 KEKKDKKGKAKQKAEEIEVTGKEENETDKHGKMKKERKRKKSESKKEGGEGEETQKEANE 755
Query: 319 SGKDEEYSEQNSSNKSFNDGDARLTTKPN---LRRLKRILPEIKRKRKKLTQEILTERTK 149
S K E +++ S K +DG+ +P+ + KR PE K+K + + +E T +
Sbjct: 756 STKKERKRKKSESKKQ-SDGEEETQKEPSESTKKERKRKNPESKKKAEAVEEE-ETRKES 813
Query: 148 LLSAKK 131
+ S KK
Sbjct: 814 VESTKK 819
Score = 32.3 bits (70), Expect = 0.22
Identities = 30/108 (27%), Positives = 49/108 (45%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K SE+K + DG + ++E SES KK R+ +N E++ K +V RK S
Sbjct: 764 KKSESKK-QSDGEEE---TQKEPSESTKKERKRKNPESKK-----KAEAVEEEETRKESV 814
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
+ + + K + T KP ++ K+ E K K+K+ E
Sbjct: 815 ESTKKERKRKKPKHDEEEVPNETEKPEKKKKKK--REGKSKKKETETE 860
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = -2
Query: 487 SETKTGKR-DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG- 314
S +K+ K+ DG + + ++ +SN KS + + ++ S + + + NS S +KS G
Sbjct: 1144 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGD 1203
Query: 313 ---KDEEYSEQNSSNKSFNDGDARLTTK 239
K ++ S+ ++++KS GD ++K
Sbjct: 1204 SCSKSQKKSDGDTNSKSQKKGDGDSSSK 1231
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Frame = -2
Query: 487 SETKTGKR-DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK---- 323
S +K+ K+ DG + + ++ +SN KS + + ++ S + + + NS S++K
Sbjct: 1168 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGD 1227
Query: 322 SSGKDEEYSEQNSSNKSF--NDGDA 254
SS K + ++ +SS+KS NDGD+
Sbjct: 1228 SSSKSHKKNDGDSSSKSHKKNDGDS 1252
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -2
Query: 487 SETKTGKR-DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
S +K+ K+ DG + + ++ +SN KS + + ++ S + + + NS S +KS G
Sbjct: 1120 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGD 1179
Query: 310 DEEYSEQNSSNKSFNDGDARLTTK 239
S SS KS D +++ + K
Sbjct: 1180 ----SNSKSSKKSDGDSNSKSSKK 1199
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Frame = -2
Query: 487 SETKTGKR-DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG- 314
S +K+ K+ DG + + ++ +SN KS + + ++ S + + + S S++KS G
Sbjct: 1156 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGD 1215
Query: 313 ---KDEEYSEQNSSNKSF--NDGDA 254
K ++ + +SS+KS NDGD+
Sbjct: 1216 TNSKSQKKGDGDSSSKSHKKNDGDS 1240
Score = 36.3 bits (80), Expect = 0.013
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -2
Query: 487 SETKTGKR-DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
S +K+ K+ DG + + ++ +SN KS + + ++ S + + + NS S +KS G
Sbjct: 1132 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGD 1191
Query: 310 DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKR 215
S + S S + + N + K+
Sbjct: 1192 SNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKK 1223
Score = 35.5 bits (78), Expect = 0.024
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
+KSS+ G + S + S+S+KKS N ++ + D N + S+ S+
Sbjct: 1122 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSN 1181
Query: 316 GKDEEYSEQNSSNKSF--NDGDA 254
K + S+ +S++KS +DGD+
Sbjct: 1182 SKSSKKSDGDSNSKSSKKSDGDS 1204
Score = 34.7 bits (76), Expect = 0.041
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
+KSS+ G + S + S+S+KKS N ++ + D N + S+ S+
Sbjct: 1134 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSN 1193
Query: 316 GKDEEYSEQNSSNKSFNDGDARLTTK 239
K + S+ +S +KS D +K
Sbjct: 1194 SKSSKKSDGDSCSKSQKKSDGDTNSK 1219
Score = 33.1 bits (72), Expect = 0.13
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = -2
Query: 496 NKSSETKTGKRDG-SKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGSERK 323
+KS K + D SKS + + S+S+KKS N ++ + D N + S+
Sbjct: 1108 SKSQSLKKNEGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGD 1167
Query: 322 SSGKDEEYSEQNSSNKSF--NDGDA 254
S+ K + S+ +S++KS +DGD+
Sbjct: 1168 SNSKSSKKSDGDSNSKSSKKSDGDS 1192
Score = 32.3 bits (70), Expect = 0.22
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGSERK 323
+N S K+ SKS + + S+S KKS N +++ D + + ++
Sbjct: 1180 SNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGDSSSKSHKKNDGD 1239
Query: 322 SSGKDEEYSEQNSSNKSFNDGDARLTTK 239
SS K + ++ +SS+KS D ++K
Sbjct: 1240 SSSKSHKKNDGDSSSKSHKKSDGDSSSK 1267
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 37.9 bits (84), Expect = 0.004
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSES-NKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
K + K K K G+ E K S N K R E +E E S R N + S
Sbjct: 636 KEANGKAEKARDGKLGMEQELRKWRSENGKRRTDEGREPEKSPTRSSTEGRNKENGFGQS 695
Query: 316 GKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSA 137
K + EQ SS+ N G + T NL PE K+K+KKL+ + + LS
Sbjct: 696 -KSFAFGEQGSSSN--NTGGSTTTNNNNLT------PETKKKKKKLS--LFPKVFMFLSR 744
Query: 136 KKNN 125
KK++
Sbjct: 745 KKSH 748
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR-DKNRSVNSGSERK 323
T +ET K D KSG EK+ES ++ +EF++K + D + S S+
Sbjct: 86 TEVVTETNEEKTDPEKSGEENSGEKTESAEERKEFDDKNGDGDRKNGDGEKDTESESDET 145
Query: 322 SSGKDEEYSEQNSSNKS 272
+ + E + NKS
Sbjct: 146 KQKEKTQLEESSEENKS 162
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -2
Query: 472 GKRDG-SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 296
G++D S+S T ++EK++ + S E NK +S+ + +E+KS E
Sbjct: 134 GEKDTESESDETKQKEKTQLEESSEE--NKSEDSNGTEENAGESEENTEKKSEENAGETE 191
Query: 295 EQNSSNKS-FNDGDARLTTK 239
E +K F GD TK
Sbjct: 192 ESTEKSKDVFPAGDQAEITK 211
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/85 (29%), Positives = 36/85 (42%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
KSS ++ +RD S S E SES + + E E+E R K + E K
Sbjct: 92 KSSRSRRRRRDYSSSSSDSE---SESESEYSDSEESESEDERRRRKRKRKEREEEEKERK 148
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTK 239
+ ++ NKS DGD + K
Sbjct: 149 RRRREKDKKKRNKSDKDGDKKRKEK 173
Score = 33.9 bits (74), Expect = 0.072
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
RRR + + ++ E+ R +K+K+K + + DG K E++K++S +V +
Sbjct: 131 RRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEKVKK 183
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDG-----SKSGVTVEREKSE-SNKKSREFENKEAESSTYRDKNRS 347
ET +++S+ K +D S+ + REK E KKS+ E + E +DK R
Sbjct: 980 ETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKRE 1039
Query: 346 VNSGSERKSSGKDEEYSEQNSSNK 275
ERKS + EE + + K
Sbjct: 1040 EKDSEERKSKKEKEESRDLKAKKK 1063
Score = 36.3 bits (80), Expect = 0.013
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKN------RS 347
E+ + SE + K DGS +E ++ + + ++ ENKE+++ + DK+ +
Sbjct: 674 ESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEA 733
Query: 346 VNSGSERKSSGKDEEYSEQNSS--NKSFNDGDARLTTK-PNLRRLKRILPEIKRKRKKLT 176
G E K E ++ S NK + R+ K N++ K+ ++++ KK +
Sbjct: 734 QIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKES 793
Query: 175 QE---ILTERTKLLSAKKN 128
++ + T+ K LS+ +N
Sbjct: 794 KDAKSVETKDNKKLSSTEN 812
Score = 35.5 bits (78), Expect = 0.024
Identities = 27/109 (24%), Positives = 48/109 (44%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
+K+S K K + K V E +K E NKK E ++E+S +++N+ E + S
Sbjct: 951 SKNSNMKK-KEEDKKEYVNNELKKQEDNKK----ETTKSENSKLKEENKDNKEKKESEDS 1005
Query: 316 GKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
++ KS +A+ K + + + +RK KK +E
Sbjct: 1006 ASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEE 1054
Score = 33.5 bits (73), Expect = 0.095
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRD--KNRSVNSG 335
E E G + S+ E+++S+ K +NK+ S+ RD K RS
Sbjct: 765 ENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDN 824
Query: 334 SERKSSGKDEEYSEQNSSNKSFNDG-DARLTTKPNLRRLK 218
E K KD Y + K+ N G D + K + + LK
Sbjct: 825 KEDKEESKD--YQSVEAKEKNENGGVDTNVGNKEDSKDLK 862
Score = 33.1 bits (72), Expect = 0.13
Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Frame = -2
Query: 508 ETGTNKSSET-KTGKRDGSKS---GVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN 341
ET K SE K+ K++ K ++++E+ + KK E + +D + +
Sbjct: 1066 ETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLED 1125
Query: 340 SGSERKSSGKDEEYSEQN-------SSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
S +K K+E+ Q+ S K + + + TK + K E+ +K KK
Sbjct: 1126 QNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETK-EIESSKSQKNEVDKKEKK 1184
Query: 181 LTQEILTERTKLLSAKKNNLLE 116
+++ ++ K + + L+
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLK 1206
Score = 31.1 bits (67), Expect = 0.51
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -2
Query: 460 GSKSGVTVER-EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNS 284
GS V ++ EK E NK+ + + +DK + K+E+ E +
Sbjct: 909 GSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVN 968
Query: 283 SNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE 116
+ + + + TTK +LK + K K++ K KK+ E
Sbjct: 969 NELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKE 1024
Score = 30.3 bits (65), Expect = 0.89
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSES--NKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
+ SETK + S+ ++EK S +K +E E KE+E + KN +RK
Sbjct: 1161 EKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLK-KNE-----EDRKK 1214
Query: 319 SGKDEEYSEQNSSNKSFN--DGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKL 146
EE +Q + K N D + TTK + + + + E K + + T+
Sbjct: 1215 QTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADS- 1273
Query: 145 LSAKKNNLL 119
KN +L
Sbjct: 1274 -DESKNEIL 1281
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVE-REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
+S E ++ SK +VE +EK+E+ NKE D++ V + E
Sbjct: 819 RSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMK 878
Query: 316 GKDEEYSEQN-SSNKSFND 263
K EE + SS K D
Sbjct: 879 KKREEVQRNDKSSTKEVRD 897
Score = 29.9 bits (64), Expect = 1.2
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E + ++ +T K + SK +E+++ NK E KE+E S KNR E
Sbjct: 970 ELKKQEDNKKETTKSENSKL-----KEENKDNK-----EKKESEDSA--SKNREKKEYEE 1017
Query: 328 RKSSGKDEEYSEQNSS---NKSFNDGDARLT--TKPNLRRLKRILPEIKRKRKK 182
+KS K+E E+ S + D + R + K R LK E + K KK
Sbjct: 1018 KKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKK 1071
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/78 (21%), Positives = 26/78 (33%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E+ +K T D K E + + K ENK + + +N G+E
Sbjct: 399 ESTNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENKVGNE 458
Query: 328 RKSSGKDEEYSEQNSSNK 275
E N S+K
Sbjct: 459 ELKGNASVEAKTNNESSK 476
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 123
+ R + + K K ++ + ++KK+ + D + S++EKE+S
Sbjct: 1008 KNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEES 1055
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
+ + S+ Q K K+ E + +KK K+ + R + + ++++KE N+
Sbjct: 1181 KEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNK 1233
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVE---REKSESNKKSREFENKEAESSTYRDKNRSVNS 338
E+ + SE + K GS +E R S ++ ENK + ST + +
Sbjct: 352 ESKEDVKSEVEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKGSGESTNDKMVNATTN 411
Query: 337 GSERKSSGKDEEYSEQNSSNKSFN 266
+ K K+E + S K N
Sbjct: 412 DEDHKKENKEETHENNGESVKGEN 435
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 36.3 bits (80), Expect = 0.013
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSR------EFENKEAESSTYRDKNRSVNSGS 332
KSS + +D S +V+++KS+ NK + E E+ ++SS Y
Sbjct: 3 KSSSSSKIIKDSSNKLRSVKKKKSKRNKSKKIRRIKDESESSGSDSSLYSSSEDDYRRKK 62
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDG-DARLTTKPNLRRLKRILPEIKRKRKKL 179
+R+S + ++ SS++S +D D RL K +R KR + +K+KK+
Sbjct: 63 KRRSKLSKKRSRKRYSSSESDDDSDDDRLLKKK--KRSKRKDENVGKKKKKV 112
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -2
Query: 436 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 260
ER+K + KK R E + +EAE R+K S S+ K K E+ +++ + +
Sbjct: 7 ERKKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEE 66
Query: 259 DARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
+ + P+ ++ K E K+K K+ + E
Sbjct: 67 EKSPSPSPSPKKSK----ESKKKHKRSSDE 92
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESN-KKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
E K K+ SKS + EKS+ KK E E +E S +S S + K S +
Sbjct: 33 EKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESKKKHKRSSDE 92
Query: 307 EE 302
E
Sbjct: 93 SE 94
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 35.5 bits (78), Expect = 0.024
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSRE-FENKEAESSTYRDKNRSVNSGSERKSS 317
K + K + + ++ ++ R+K KSR+ + K+ E R K+R N K
Sbjct: 62 KERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRE-NERDNEKEK 120
Query: 316 GKDEEYSEQNSSNKSFNDGD 257
KD ++ +S KS D D
Sbjct: 121 DKDRARVKERASKKSHEDDD 140
Score = 31.1 bits (67), Expect = 0.51
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Frame = -2
Query: 478 KTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS-VNSGSERKSSGKDEE 302
K ++D S+ V E++K + + ++ EN E ++ +DK+R+ V + +KS D+E
Sbjct: 84 KEREKDKSRDRVK-EKDKEKERNRHKDREN-ERDNEKEKDKDRARVKERASKKSHEDDDE 141
Query: 301 YSE-----QNSSNKSFNDG----DARLTTK-PNLRRLKRILPEIKRKRKKLTQE 170
+ ++S N+ N+G DA + K + L+ + +++ +RKK ++
Sbjct: 142 THKAAERYEHSDNRGLNEGGDNVDAASSGKEASALDLQNRILKMREERKKKAED 195
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK-SSGKD 308
E + G+R K + ++EK +K R+ +++ + RD+ RS + +E++ S G+D
Sbjct: 26 EHRDGRRK-EKDHRSKDKEKDYDREKIRDKDHRR-DKEKERDRKRSRDEDTEKEISRGRD 83
Query: 307 EEYSEQNSSNK 275
+E + S ++
Sbjct: 84 KEREKDKSRDR 94
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 236 KSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 123
K + +K RD+K DT + EREK++S
Sbjct: 54 KDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKS 91
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 35.5 bits (78), Expect = 0.024
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVE---REKSESNKKSREFE-----NKEAESSTYRDKNR 350
T +KSS+T + SKS + E E++ S ++S E E K S + +D +
Sbjct: 717 TPASKSSKTSQDDKTASKSKDSKEASREEEASSEEESEEEEPPKTVGKSGSSRSKKDISS 776
Query: 349 SVNSGSERKSSGKDEEYSEQNSSNKS 272
SG + SS K EE S+ +S+KS
Sbjct: 777 VSKSGKSKASSKKKEEPSKATTSSKS 802
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 35.5 bits (78), Expect = 0.024
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
+ + G++ S++G R + E R+ E + + T R ++RSV ++ K
Sbjct: 614 RRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRT-RSRSRSVEDSADIKDKS 672
Query: 313 KDEE--YSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKR 188
+DEE + ++ S ++S D T N K+ + R R
Sbjct: 673 RDEELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSR 716
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = -2
Query: 487 SETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
S++ GKR +K T R+K + R + +E RD S E+KS +
Sbjct: 793 SKSVEGKRSYNKE--TRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKS--RH 848
Query: 307 EEYSEQNSSNKSFNDGDARLTTKPNLR 227
+ +S S K + D R LR
Sbjct: 849 KRHSRSRSIEKKNSSRDKRSKRHERLR 875
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGS 332
E G ++ E + D + T E E N EN E + D+ S+ +G+
Sbjct: 172 ENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGN 231
Query: 331 ERKSSGKDEEYSEQNSS 281
E + SG ++ E+N S
Sbjct: 232 ESEESGNEDHSMEENGS 248
Score = 30.7 bits (66), Expect = 0.67
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E N ++E + G + ++G E E + N + EN E + D+N N G++
Sbjct: 162 EETENDNTEEENGNDEEDENGNDEEDENDDENTE----ENGNDEEND--DENTEEN-GND 214
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGD 257
++ +DEE S + + N+S G+
Sbjct: 215 EENEKEDEENSMEENGNESEESGN 238
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -2
Query: 505 TGT-NKSSETKTGKRD--GSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
+GT +K ETK K++ ++ G + E+ + E EN E D+ +
Sbjct: 125 SGTASKPKETKKRKQEEPSTQKGARKSKIDEETKRNDEETENDNTEEENGNDEEDENGND 184
Query: 334 SERKSSGKDEEYSEQNSSNKSFND 263
E ++ D+E +E+N +++ +D
Sbjct: 185 EEDEN---DDENTEENGNDEENDD 205
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/92 (23%), Positives = 35/92 (38%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
+ G KS + KR+ + T E N E EN E D+N N E
Sbjct: 145 QKGARKSKIDEETKRNDEE---TENDNTEEENGNDEEDENGNDEEDENDDENTEENGNDE 201
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGDARLTTKPN 233
D+E +E+N +++ D + + N
Sbjct: 202 EN----DDENTEENGNDEENEKEDEENSMEEN 229
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 35.5 bits (78), Expect = 0.024
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = -2
Query: 415 NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKP 236
N+KS + E Y++ +++ +++ +Y EQ N N+ + +L +
Sbjct: 1230 NEKSELSKAVEGLECRYKEA-KAIEEDRDKQVLRLRGDYDEQVKKNSHSNEANLKL--EA 1286
Query: 235 NLRRLKRILPEIKRKRKKLTQEILTERTKL 146
+L L L EIK +++ L QE+ TER ++
Sbjct: 1287 DLMNLLMELEEIKVEKENLNQELFTERNEI 1316
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 35.1 bits (77), Expect = 0.031
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGK-RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS 332
+ G K S+ K+ + + S++ V+R+K +S K+S + ESS DK +
Sbjct: 111 DDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSKKESGGDVIENTESSKVSDKKKGKRKRD 170
Query: 331 ERKSSGK---DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILT 161
+ + D+E +N+ K D D + K+ KRK+KK +++ T
Sbjct: 171 DTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKK-----KRKKKKQSEDSET 225
Query: 160 ERTKLLSAK 134
E L S K
Sbjct: 226 EENGLNSTK 234
>At5g24290.2 68418.m02858 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 534
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGS----KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS 347
+ ETG+N+ SET + + +G+ S + +++ + + E +E E + R + S
Sbjct: 85 VSETGSNEESETGSNEENGNNWLESSSTNLPNVENKRQRNGEDCEIEEEEENNERSLSDS 144
Query: 346 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRL 221
+ K G E Y N + + K NL L
Sbjct: 145 EEKSNLEKLLGTQENYELGNEDEEKNERSSSDSEEKSNLENL 186
>At5g24290.1 68418.m02857 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 550
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGS----KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS 347
+ ETG+N+ SET + + +G+ S + +++ + + E +E E + R + S
Sbjct: 101 VSETGSNEESETGSNEENGNNWLESSSTNLPNVENKRQRNGEDCEIEEEEENNERSLSDS 160
Query: 346 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRL 221
+ K G E Y N + + K NL L
Sbjct: 161 EEKSNLEKLLGTQENYELGNEDEEKNERSSSDSEEKSNLENL 202
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = -2
Query: 430 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDAR 251
EKS+ +K ++ + K+ +++ D+ + + K D++Y E+ K +ND D +
Sbjct: 159 EKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDDEK 218
Query: 250 LTTK 239
K
Sbjct: 219 KKKK 222
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = -2
Query: 511 FETGTNKSSET-KTGKRDGSKSGVTVEREKSESNKKSREFE--NKEAESSTYRDKNRSVN 341
++ G KS + K K+D K G E ++ + KK +++ + + + + K + N
Sbjct: 154 YDDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYN 213
Query: 340 SGSERKSSGKDEEYSEQNSSNKSFNDGD 257
E+K + ++ ++ND D
Sbjct: 214 DDDEKKKKKHYNDDDDEKKKKHNYNDDD 241
Score = 31.9 bits (69), Expect = 0.29
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = -2
Query: 463 DGSKSGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 296
DG + E+EK + KK S + E K+ + ++ + E+K KD
Sbjct: 156 DGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDD 215
Query: 295 EQNSSNKSFNDGDARLTTKPN 233
++ K +ND D K N
Sbjct: 216 DEKKKKKHYNDDDDEKKKKHN 236
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
D KSKK EK +DKK+ D NS+ +++KEQ
Sbjct: 156 DGDEKSKKKEKEKKKDKKK----DGNNSEDDEFKKKKKKEQ 192
>At4g32610.1 68417.m04643 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SP|P40513
Mitochondrial acidic protein MAM33, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02330: Mitochondrial glycoprotein
Length = 557
Score = 34.7 bits (76), Expect = 0.041
Identities = 28/123 (22%), Positives = 51/123 (41%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
+++ + G++D G EK E N + + EN ES + K + ++S +
Sbjct: 184 ATKDENGQQDSQDKG-----EKKEVNDEGEKKENTTGESKASKKKKKKDKQKELKESQSE 238
Query: 310 DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKK 131
+ S+ S + + + + K RLK+I K+K K T K +A+K
Sbjct: 239 VKSNSDAASESAEQEESSSSIDVK---ERLKKIASMKKKKSSKEVDGASTAAAKEAAARK 295
Query: 130 NNL 122
L
Sbjct: 296 AKL 298
>At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) family
protein similar to SP|P25270 Ribose methyltransferase
PET56 (EC 2.1.1.-) {Saccharomyces cerevisiae}; contains
Pfam profile PF00588: SpoU rRNA Methylase (RNA
methyltransferase, TrmH) family
Length = 589
Score = 34.7 bits (76), Expect = 0.041
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Frame = -2
Query: 502 GTNKSSETKTGKRDGSKSGVTVEREKSESN--------KKSREFENKEAESSTYRDKNRS 347
G ++ ++ G+RD S V E +K N K ++E + S++ D+ R+
Sbjct: 164 GETRNRDSFRGRRDDRISEVEEESKKGGGNSIWVANDDKPAKEQSPRVNNRSSWDDRTRN 223
Query: 346 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKR 194
NS S R EE +E+ + N + DGD + +P+ R I R
Sbjct: 224 QNSFSARGDDRITEE-AEEETMNHAPEDGDGIVEEEPDNTRWSEIKNRFNR 273
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 34.7 bits (76), Expect = 0.041
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T KSSE K ++ +++E+ K+ +E T++ + +N E+K
Sbjct: 220 TRKSSELKLRLKEVETRESVLQQERLSFTKERESYEG------TFQKQREYLNEW-EKKL 272
Query: 319 SGKDEEYSEQ----NSSNKSFNDGDARLTTK-PNLRRLKRILPEIKRKRKKLTQEILTER 155
GK+E +EQ N + N+ + +L K L R + ++ + K T+E +T+R
Sbjct: 273 QGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKV-DLSMSKSKETEEDITKR 331
Query: 154 TKLLSAKK 131
+ L+ K+
Sbjct: 332 LEELTTKE 339
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 34.7 bits (76), Expect = 0.041
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T KSSE K ++ +++E+ K+ +E T++ + +N E+K
Sbjct: 233 TRKSSELKLRLKEVETRESVLQQERLSFTKERESYEG------TFQKQREYLNEW-EKKL 285
Query: 319 SGKDEEYSEQ----NSSNKSFNDGDARLTTK-PNLRRLKRILPEIKRKRKKLTQEILTER 155
GK+E +EQ N + N+ + +L K L R + ++ + K T+E +T+R
Sbjct: 286 QGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKV-DLSMSKSKETEEDITKR 344
Query: 154 TKLLSAKK 131
+ L+ K+
Sbjct: 345 LEELTTKE 352
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 34.3 bits (75), Expect = 0.054
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Frame = -2
Query: 457 SKSGVTVEREKSESNKKSREFENKEAESST----YRDKNRSVNSGSERKSSGKD---EEY 299
+KSG+ + +E K + +E+ ESS +D+ RS SE ++ K E
Sbjct: 84 AKSGILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENK 143
Query: 298 SEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLL 119
+++N +S ++R+ ++ KRI+ E K K+ K E LT+++ ++ +K + +
Sbjct: 144 AKENEEKQSIT--ESRVKKSVTEKKTKRIISEKKVKQSK--PEKLTKQSTSVNREKQSEV 199
Query: 118 E 116
E
Sbjct: 200 E 200
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 34.3 bits (75), Expect = 0.054
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E T+K + D +S + + + ++ S+ KSR+ + K+ +S + K R S SE
Sbjct: 73 EADTDKLMREYRAQLDAERS-LKLSKGRNYSSDKSRK-DKKDRDSKKKKSKKRKHYSSSE 130
Query: 328 RKSSGKDEEYSEQNSSNK 275
SS ++E SS+K
Sbjct: 131 SSSSSDEDESRRSRSSSK 148
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 33.9 bits (74), Expect = 0.072
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS 317
NKSS + + + + E+E+ ++KK +E E +S D N + E+
Sbjct: 398 NKSSSSSDSEDEEEEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQL 457
Query: 316 GKDEEYSEQNSSNKS 272
K E S +S + S
Sbjct: 458 EKARESSSSSSDSGS 472
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E K E+ + KR + T ++S+SN + + E + + S +SGSE
Sbjct: 414 EQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGSE 473
Query: 328 RKS 320
R+S
Sbjct: 474 RRS 476
>At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong
similarity to RNA helicase RH26 [Arabidopsis thaliana]
GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain; identical to cDNA DEAD box RNA helicase, RH26
GI:3776024
Length = 850
Score = 33.9 bits (74), Expect = 0.072
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = -2
Query: 478 KTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 299
+ G R+GS++G V+ + SES+ + R N ++ SS +++V+SGS + G+++
Sbjct: 177 RLGDREGSRNG-RVQGKSSESSFRGRSDRNVDSGSSFRGRSDKNVDSGSSFR--GRNDRN 233
Query: 298 SEQNSSNKSFND 263
+ SS + +D
Sbjct: 234 VDSGSSFRGRSD 245
>At1g29950.2 68414.m03661 expressed protein
Length = 251
Score = 33.9 bits (74), Expect = 0.072
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAES--STYRDKNRSVNSGSERKS 320
+ ++ G+ DG S E S + SR++ N AES S+Y N + N+ ++
Sbjct: 131 EENDDNEGEEDGGDS-----EEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSL 185
Query: 319 SGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILP 206
SG S++ S NDG R K + L+RI+P
Sbjct: 186 SG---------SASSSNNDGKGRKKMKKMMGVLRRIVP 214
>At1g29950.1 68414.m03660 expressed protein
Length = 251
Score = 33.9 bits (74), Expect = 0.072
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAES--STYRDKNRSVNSGSERKS 320
+ ++ G+ DG S E S + SR++ N AES S+Y N + N+ ++
Sbjct: 131 EENDDNEGEEDGGDS-----EEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSL 185
Query: 319 SGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILP 206
SG S++ S NDG R K + L+RI+P
Sbjct: 186 SG---------SASSSNNDGKGRKKMKKMMGVLRRIVP 214
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 33.5 bits (73), Expect = 0.095
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEA------ESSTYRDKNRSVNSG 335
NK+ E + K + +S V E+E SE + + E+K+A E++ ++ + + G
Sbjct: 223 NKTKEVEAAKAEVDESKVEDEKEGSEDENDNEKVESKDAKEDEKEETNDDKEDEKEESKG 282
Query: 334 SERKSSGKDE--EYSEQNSSNKSFNDGDAR 251
S+++ G + E+N + + D + R
Sbjct: 283 SKKRGKGTSSGGKVREKNKTEEVKKDAEPR 312
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK-S 320
N + + K+D K+ ++EK + +K+ +E ++KE + +DK ERK
Sbjct: 56 NGPKDKEQEKKDKEKAAKD-KKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEK 114
Query: 319 SGKDEEYSEQNSSNKSFNDGDAR 251
K++E + +K ++ AR
Sbjct: 115 ERKEKERKAKEKKDKEESEAAAR 137
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -1
Query: 236 KSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
+ KK ++ +A+DKKEKEK D + K +EKE+ ++ +
Sbjct: 63 QEKKDKEKAAKDKKEKEKKDKEEKEKKDK-ERKEKEKKDKLEK 104
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS 347
E + E K +R + +E+EK + +K +E + KE ++ +DK S
Sbjct: 79 EKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEKKDKEES 132
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS-EREKEQSSR 117
D + +K ++ +DK+EKEK D + K E+EK+ R
Sbjct: 67 DKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKER 111
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
+ + K K+ ++ +DK EKEK D + K ER+ ++
Sbjct: 85 EKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKE 125
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREF-ENKEAESSTYRDKNRSVNSGSERKSS 317
+S K +G + V V++ K ++ K + ++KE E +DK ++ E++
Sbjct: 25 QSDGGKGNGNNGKGNEVQVDKGKGDNGKSNGNGPKDKEQEK---KDKEKAAKDKKEKEKK 81
Query: 316 GKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
K EE +++ K D K + R ++ E +RK K+
Sbjct: 82 DK-EEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKE 125
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -2
Query: 508 ETGTNKSSE--TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
E G +K E ++ +R + G E+ K S K R+ + SS +RD +R G
Sbjct: 57 EKGRDKDRERDSEVSRRSRDRDG---EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RG 111
Query: 334 SERKSSGKDEE 302
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
ET K + G +RE+ SE +++SR+ + ++++ + RDK+R R S +D
Sbjct: 47 ETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERHHRSSRHRD 105
Query: 307 EEYSEQNSSNKSFNDGD 257
+ D D
Sbjct: 106 HSRERGERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 522 DDKYSRQEPINHQKRR--QASVMARRAASQSKGKNPNPTR 409
DD Y R +H +RR + +RR+ S+SK ++ TR
Sbjct: 121 DDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTR 160
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -2
Query: 508 ETGTNKSSE--TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
E G +K E ++ +R + G E+ K S K R+ + SS +RD +R G
Sbjct: 57 EKGRDKDRERDSEVSRRSRDRDG---EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RG 111
Query: 334 SERKSSGKDEE 302
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
ET K + G +RE+ SE +++SR+ + ++++ + RDK+R R S +D
Sbjct: 47 ETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERHHRSSRHRD 105
Query: 307 EEYSEQNSSNKSFNDGD 257
+ D D
Sbjct: 106 HSRERGERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 522 DDKYSRQEPINHQKRR--QASVMARRAASQSKGKNPNPTR 409
DD Y R +H +RR + +RR+ S+SK ++ TR
Sbjct: 121 DDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTR 160
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -2
Query: 508 ETGTNKSSE--TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
E G +K E ++ +R + G E+ K S K R+ + SS +RD +R G
Sbjct: 57 EKGRDKDRERDSEVSRRSRDRDG---EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RG 111
Query: 334 SERKSSGKDEE 302
R+ G+D++
Sbjct: 112 ERRERGGRDDD 122
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
ET K + G +RE+ SE +++SR+ + ++++ + RDK+R R S +D
Sbjct: 47 ETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERHHRSSRHRD 105
Query: 307 EEYSEQNSSNKSFNDGD 257
+ D D
Sbjct: 106 HSRERGERRERGGRDDD 122
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 522 DDKYSRQEPINHQKRR--QASVMARRAASQSKGKNPNPTR 409
DD Y R +H +RR + +RR+ S+SK ++ TR
Sbjct: 121 DDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTR 160
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 511 FETGTNKSSETKTGKRDGSKS-GVTVEREKSESNKKSREFE---NKEAESSTYRDKNRSV 344
FET + + + G+ DG+K+ VT + E S KK + E EA +K +++
Sbjct: 43 FETASEREISDEEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKAL 102
Query: 343 NSGSERKSSG 314
+E K+ G
Sbjct: 103 AEANEAKAEG 112
>At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 208
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 511 FETGTNKSSETKTGKRDGSKS-GVTVEREKSESNKKSREFE---NKEAESSTYRDKNRSV 344
FET + + + G+ DG+K+ VT + E S KK + E EA +K +++
Sbjct: 43 FETASEREISDEEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKAL 102
Query: 343 NSGSERKSSG 314
+E K+ G
Sbjct: 103 AEANEAKAEG 112
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 33.1 bits (72), Expect = 0.13
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
K VE+E + + ++K+ +DKNR N K S ++E S+ N S+
Sbjct: 729 KDSEQVEKEDNSDLDANLSCDSKDTIRHQIKDKNRRKN-----KRSSREEVSSDDNGSSD 783
Query: 274 SFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
S D D R K + K+ E K++R++
Sbjct: 784 S--DVDDRKEAKRRRKEEKKTRKEEKKRRRE 812
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 33.1 bits (72), Expect = 0.13
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVN 341
E K + K K++ +SG + +K++ KK S+E E E E K
Sbjct: 125 ELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDE 184
Query: 340 SGSE-RKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEIL 164
SG+E +K K E+ +Q +KS D + + + E K+K T + +
Sbjct: 185 SGTEEKKKKPKKEK--KQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEM 242
Query: 163 TERTKLLSAKK 131
E+ + KK
Sbjct: 243 KEKDSKKNKKK 253
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
+ K+KK E++S + KK+KEK +N D K + + ++
Sbjct: 44 KVKAKKDEESSGKSKKDKEKKKGKNVDSEVKEDKDDDKK 82
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -2
Query: 436 EREKSESNKKSREF--ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
E + +E KKS+ E++E + +DK ++ ++ +DEE + +S +
Sbjct: 407 EEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKDVKIEG 466
Query: 262 GDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE*IK 107
A+ K + K+ +I + + KL + + E+ L +K + IK
Sbjct: 467 SKAKEEKKDKDVKKKKGGNDIGKLKTKLAK--IDEKIGALMEEKAEIENQIK 516
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 239 TKSKKVEKNSARDK-KEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 108
+K K+ EK ++ +E+EK TRN D + +RE+E R NQ
Sbjct: 97 SKGKEPEKKREEERPREREKGKTRNIDNFMEELKREQEMRERRNQ 141
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
E K + D +S R +++S R+ +E + RD++R + +R+ +
Sbjct: 856 ERKEKREDSQESSKKRHRGENKSQSPPRKSSTRERDHDLGRDRDRERHRDRDRQHDLNRD 915
Query: 304 EYSEQNSSNKSFNDGD 257
+ SS+ +D D
Sbjct: 916 RDRREKSSSHDRDDND 931
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 326
+G +K S K+ +K V + ++K E + S + E + D+ + N +
Sbjct: 22 SGRSKRSSGSRTKKTSNK--VNIVKKKPEIYEISESSSSDSVEEAIRGDEAKKSNGVVSK 79
Query: 325 KSSGKDEEYSEQNSSNKSFNDGDAR-LTTKPNLRRLKRIL 209
+ +GK + S N+ +DG A K + R++RI+
Sbjct: 80 RGNGKSVGIPTKTSKNREEDDGGAEDAKIKFPMNRIRRIM 119
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 32.3 bits (70), Expect = 0.22
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
+ K D KS ER+K +S K + E E E K+ + + K KDE
Sbjct: 168 KVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEI----KEKKKNKDE 223
Query: 304 EYSEQNSSNKSFND---GDARLTTKPNLRRLKRILPEIK--RKRKKLTQEILTERTKLLS 140
+ ++ K ++ G+ + K + + I+ E + +K++K +E+ +E K S
Sbjct: 224 DVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEERK--S 281
Query: 139 AKKNNLLE 116
KK L E
Sbjct: 282 KKKRKLKE 289
Score = 31.9 bits (69), Expect = 0.29
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDK-NRSVNSGS 332
E K ++K K +E E+ ++ R+ E K+ +++ D + V
Sbjct: 114 ERDEKKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKL 173
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERT 152
E + D + ++ S K+ ND D + K L ++ EIK K+K ++++ E+
Sbjct: 174 EDEQKSADRKERKKKKSKKN-NDEDV-VDEKEKLEDEQKSA-EIKEKKKNKDEDVVDEKE 230
Query: 151 K 149
K
Sbjct: 231 K 231
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 254 SADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 123
SA+ + K K +++ D+KEKEK + G K +++K +S
Sbjct: 211 SAEIKEKKKNKDEDVV-DEKEKEKLEDEQRSGERKKEKKKKRKS 253
>At4g26190.1 68417.m03770 expressed protein
Length = 1067
Score = 32.3 bits (70), Expect = 0.22
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Frame = -2
Query: 463 DGSKSGVTVEREKSESNKKSRE---FENK---EAESSTYRDKNRSVNSGSERKSSGKDEE 302
D ++ G + ++ K KK +E E K E E T D+ V+ + S+G +E
Sbjct: 126 DDNRKGSSTKKSKRREKKKKKEDLSCEEKLLDEVEKITSEDQ---VHPPNNPLSNGMVQE 182
Query: 301 YSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEI-------KRKRKK 182
S + + + G A++ T PNL K LP+ KRKR K
Sbjct: 183 RSGELTQDSCEKPGAAQICTDPNLSTCKDSLPDATNMTSSSKRKRNK 229
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T++S E + + KS REK + ++SRE +++ + RD+ R +R
Sbjct: 252 TSQSEEPSRPREEREKS-----REKGKERERSRELSHEQPRERS-RDRPREDKHHRDRDQ 305
Query: 319 SGKDEEYSEQNSSNKSFNDGD 257
G+D + + +++ + GD
Sbjct: 306 GGRDRDRDSRRDRDRTRDRGD 326
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 31.9 bits (69), Expect = 0.29
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKE---AESSTYRDKN-RSVNSGSERK 323
S E G+ + G T E ++ +S + E ENKE ES + D N + SG E
Sbjct: 48 SMEDDEGESEEDDEGDTEEDDEGDSEEDD-EGENKEDEDGESEDFEDGNDKESESGDEGN 106
Query: 322 SSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLK---RILPEIKRKRKKLTQEILTERT 152
KD + E K + + NL+R K + + + +K L +IL R
Sbjct: 107 DDNKDAQMEELEKEVKELRSQEQDIL--KNLKRDKGEDAVKGQAVKNQKALWDKILEFRF 164
Query: 151 KLLSA 137
L A
Sbjct: 165 LLQKA 169
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
E E+SESN+K ++ N+ S Y G RKS K E + +++F++
Sbjct: 114 EGERSESNEKKKQKRNRSQSHSEYDTDEEDRRKGKTRKS--KLESADREGKDDENFDE 169
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
+ + ++K ++ S V+ +RE E+ KK E K + + S +S S+
Sbjct: 182 DAAEREKGKSKKSNKNFSPGDVS-DREAKETRKK--ESNEKRIKRKRRYSSSDSYSSSSD 238
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGDARL---TTKPNLRRLKR 215
S + E YS + + S +DG R TT+ RR +R
Sbjct: 239 SDSDSESEAYSSSSYESSSSSDGKHRKRKSTTRHKGRRGER 279
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
+ + ++K ++ S V+ +RE E+ KK E K + + S +S S+
Sbjct: 182 DAAEREKGKSKKSNKNFSPGDVS-DREAKETRKK--ESNEKRIKRKRRYSSSDSYSSSSD 238
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGDARL---TTKPNLRRLKR 215
S + E YS + + S +DG R TT+ RR +R
Sbjct: 239 SDSDSESEAYSSSSYESSSSSDGKHRKRKSTTRHKGRRGER 279
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSR-EFENKEAESSTYRDK-NRSVNSG 335
E+G K+ E + V++ + E + +++ E ++ E+ES T + S +S
Sbjct: 204 ESGLKKTDEGLACSIEVGLEKVSLAVDDDEKSDEAKGEMDSAESESETSSSSASSSDSSS 263
Query: 334 SERKSSGKDEEYSEQNSSNKSF 269
SE + S +DE E+N + F
Sbjct: 264 SEEEESDEDESDKEENKKEEKF 285
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -2
Query: 439 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 260
V EK +KSR NKE + + RS E + GK + S NSS S ++
Sbjct: 218 VSSEKGNFKEKSRPGGNKERQEPSVEGSTRS----GENRKDGKSSKSSSSNSSAVSESES 273
Query: 259 D 257
D
Sbjct: 274 D 274
>At4g17150.1 68417.m02581 expressed protein
Length = 402
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -2
Query: 406 SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLR 227
+ E E+ A +K VN+ + + S ++EE E++S K +G KP
Sbjct: 317 TEEDESLTAGEGDQVEKTADVNTERKPRDSSREEE--EEDSKEKKIKNGGETDAKKPRHE 374
Query: 226 RLKRILPEIKRKRKKLTQEI 167
+L+R+ KR R + + +
Sbjct: 375 KLERLEAFSKRLRHYILKRV 394
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTV-EREKSESNKKSREFENKEAESSTYRDKNRSVN-SG 335
+ +K SE K ++D K TV E E+ + K +EFE ++ + RD++ G
Sbjct: 127 QNNDDKISEEK--EKDNGKENQTVQESEEGQMKKVVKEFEKEQKQQ---RDEDAGTQPKG 181
Query: 334 SERKSSGKDEEYSEQNSSNKSFNDGDA 254
++ + G+ +E + NK + D+
Sbjct: 182 TQGQEQGQGKEQPDVEQGNKQGQEQDS 208
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 31.5 bits (68), Expect = 0.38
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = -2
Query: 421 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTT 242
+S +K E E E S R + E+K D E SE+NS+ KS+ D +LT
Sbjct: 102 QSIEKDGEVERMSTEMSELHKSKRQLMELLEQK----DAEISEKNSTIKSYLDKIVKLTD 157
Query: 241 KPNLR--RLKRILPEIKRKR---KKLTQE-ILTER 155
+ + RL E+ R + +L+QE LTER
Sbjct: 158 TSSEKEARLAEATAELARSQAMCSRLSQEKELTER 192
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVT---VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER 326
+K +E G+ G+ V+ +++ K E K + E E + + + S + E
Sbjct: 1459 DKITEYHRGEEKGTAENVSSTKIQQTKDELEKPRKPSEISE-NHNIHEFMDSSQSQDIEE 1517
Query: 325 KSSGKDEEYSEQNSSNKSFNDGDAR 251
K S + E+Y++QN + ND D +
Sbjct: 1518 KGSDQAEKYAKQNKIQEVMNDEDKK 1542
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = -2
Query: 463 DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNS 284
DG K + V K+E+NK R E +E + DK + ++ G+ ++ E
Sbjct: 671 DGGKGIIAVAETKAENNKSKRVQETEEQK----LDKEDTCGKHFQKLIEGEISDHGEVED 726
Query: 283 SNKSFNDGDARLTTKPNLRRLKRILPEIKRK 191
K G R + ++ R EIK K
Sbjct: 727 VEK----GKKRTEAEKRIKDRAREAEEIKEK 753
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVE-REKSESNKKSREFENKEAESSTYRDKNRSVNS 338
+ E G + +E + + K +E +EK E ++ +E + AE + R +
Sbjct: 114 LLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKE 173
Query: 337 GSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRI-LPEIKRKRKKLTQEILT 161
ER+ ++E Y E + + R + RLK++ L + R KL+ + +
Sbjct: 174 AMERQRK-EEERYRELEELQRQKEEAMRRKKAEEEEERLKQMKLLGKNKSRPKLSFALSS 232
Query: 160 ERTKL 146
+ T +
Sbjct: 233 KMTTM 237
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
+ E SES ++ E+E +E E + R +S E + +++E E+ SN+ ++D D
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDE-EERGKSNR-YSDED 573
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
+ E SES ++ E+E +E E + R +S E + +++E E+ SN+ ++D D
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDE-EERGKSNR-YSDED 573
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 296
E E+ +SN+ S E E +E + +K+ SG +RK DEE S
Sbjct: 560 EEERGKSNRYSDEDEEEEEVAGGRAEKDHR-GSGRKRKGIESDEEES 605
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = -2
Query: 472 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 293
G+ S +R K ++ K +FE KEA+ R K R N E + G D++ +E
Sbjct: 25 GRNSASPEESLGKRRKRKTVKLYEDFEEKEAD----RKKKRKGNKEDEDMAEG-DDDQAE 79
Query: 292 QNSSNKSFNDGDARLTTKPN 233
+ ++ ++ + D KP+
Sbjct: 80 EETNPEAEEEEDEEEEEKPD 99
>At1g76820.1 68414.m08939 expressed protein
Length = 266
Score = 31.1 bits (67), Expect = 0.51
Identities = 29/107 (27%), Positives = 48/107 (44%)
Frame = -2
Query: 502 GTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK 323
G +SS++KT SKS VE +S+ +KK + E D ++ + E
Sbjct: 150 GDEESSQSKTSD---SKSVELVESARSKKHKKKNKSGRTLQEDD---DLDKLLAELGETP 203
Query: 322 SSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
++GK E++ + T + RRL R+L KRKR++
Sbjct: 204 AAGKPASEEEKDQAQPE-PVAPVENTGEKEKRRLLRLLQPRKRKRRR 249
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 31.1 bits (67), Expect = 0.51
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNK-KSREFENKEAESSTYRDKNRSVNSGSE 329
T + ++ K KRD K ER++ E K K +E KE E + K RS S+
Sbjct: 788 TSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESD 847
Query: 328 RKSS 317
+++
Sbjct: 848 GETA 851
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 230 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
+KV K RD+KEK K ++ + K EREKE+
Sbjct: 804 EKVRKEKERDEKEKRKD--KDKERREKEREREKEK 836
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 436 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN 266
E+E+ +K R E E E E +DK R K GK+ E++ + +
Sbjct: 796 EKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMD 853
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 31.1 bits (67), Expect = 0.51
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -2
Query: 499 TNKSSETKTG-KRDGSKSGVT--VEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGS 332
T K G K + K G T E EK + +K+ E ENKEAE RDK S+ S
Sbjct: 164 TEAEKVNKEGEKTEAGKEGQTEIAEAEKEKEGEKA-EAENKEAE--VVRDKKESMEVDTS 220
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDGDAR 251
E + E +E+ S + D + +
Sbjct: 221 ELEKKAGSGEGAEEPSKVEGLKDTEMK 247
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -2
Query: 487 SETKTGKRDGSKSGVT----VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
+E +++ K GVT E+E +E K E NKE E + + ++ + +E++
Sbjct: 134 TENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEKEK 193
Query: 319 SGKDEE 302
G+ E
Sbjct: 194 EGEKAE 199
>At1g08760.1 68414.m00975 expressed protein similar to At1g21030,
At5g44890, At2g29240, At1g08740; similar to EST
gb|N96641
Length = 748
Score = 31.1 bits (67), Expect = 0.51
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = -2
Query: 460 GSKSGVTVEREKSESNKK--SREFENKEAESSTYRD-KNRSV-----NSGSERKSSGKDE 305
G++ V++ R+ S KK S F K A+SS D K S+ +SGS+ S
Sbjct: 166 GNRLSVSISRDDSSDGKKPVSALFRAKSAKSSLSLDVKKESLGKLKTSSGSKSIPSSPTS 225
Query: 304 EYSEQNSSNKSFNDGDARLTTKPNL 230
YS NS K N + T KP L
Sbjct: 226 CYSLPNSFAKFANGIKQQQTVKPKL 250
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 30.7 bits (66), Expect = 0.67
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDEEYSEQNSSNKSFNDG 260
+ E ++N+K + E ++ E + + S + E+KS D++ S+ + NK+ N+
Sbjct: 162 DEENPDTNEKQTKPETEDNELGEDGENQKQFESDNGEKKSIDDDKKSSDDDKENKTGNED 221
Query: 259 DARLTTKPN 233
T K N
Sbjct: 222 TETKTEKEN 230
>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 283
Score = 30.7 bits (66), Expect = 0.67
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 129
+ +TK KKV+ S + KKEKEK + +D K SE +K+
Sbjct: 81 EEKTK-KKVDLVSPQPKKEKEKENKNKNDEDKKKSEEKKK 119
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 30.7 bits (66), Expect = 0.67
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSES-NKKSREFENKEAESSTYRDKNRSVNSGSERK 323
T K + + +D KS +++E EK ES NKK R + E S + +S + G K
Sbjct: 1514 TPKKNLKQLHPKDTPKS-LSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLK 1572
Query: 322 SSGKDEEY---SEQNSSNKSFNDGDA 254
DEE E K+ + GDA
Sbjct: 1573 EGEDDEEVVNKEEDLQEAKTESSGDA 1598
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 385 EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPN 233
E Y +K GSE KSS ++ E S N+ +D D + KP+
Sbjct: 136 EQRVKEYCEKYAKPGEGSEDKSSDEELSEEEYGSDNEDDDDDDVAIAGKPD 186
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 30.7 bits (66), Expect = 0.67
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
+ T K +G + VERE+ E K E KEAE + + N N+G K + E
Sbjct: 96 DVSTDKENGDE---IVEREEEE--KAVEENNEKEAEGTGNEEGNEDSNNGESEKVVDESE 150
Query: 304 ---EYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAK 134
E S + + ++ DA E++ + K + E ++ S
Sbjct: 151 GGNEISNEEAREINYKGDDASSEVMHGTEEKSNEKVEVEGESKSNSTENVSVHED-ESGP 209
Query: 133 KNNLLE*IKVRAATLGIPRSQTNLAEK 53
KN +LE ++ +L + ++ E+
Sbjct: 210 KNEVLEGSVIKEVSLNTTENGSDDGEQ 236
Score = 30.3 bits (65), Expect = 0.89
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E G++ + +T SK+G E+ S+SN + E + ++ + + S SGS
Sbjct: 228 ENGSDDGEQQETKSELDSKTG---EKGFSDSNGELPETNLSTSNATETTESSGSDESGSS 284
Query: 328 RKSSGKDEEYSEQNSSNK 275
KS+G + +E++ K
Sbjct: 285 GKSTGYQQTKNEEDEKEK 302
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -2
Query: 502 GTNKSSETKTGKRDGSKSGVTVEREKSESNKK---SREFENKEAESSTYRDKNRSVNSGS 332
G K E + +++ S S + E+ E+ +K S + EN+ E+ + S G+
Sbjct: 346 GEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGN 405
Query: 331 ERKSSGKDEEYSEQNSSNKS 272
E K + K S++ + S
Sbjct: 406 ENKETEKKSSESQRKENTNS 425
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 239 TKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 120
+ S++ K + KEKE + ++ + +T +EKE+SS
Sbjct: 361 SSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESS 400
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 30.7 bits (66), Expect = 0.67
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEA--ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 281
K + ++++E K+ R+ E K E +K++ + S E + DE+ E
Sbjct: 142 KEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEEEMREID-DEKKREIEEL 200
Query: 280 NKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTE---RTKLLSAKKNNLLE 116
K+ + L N+ LK+ + +KKLT+E L+E R K L KK+ LL+
Sbjct: 201 QKTVIVLNLELVK--NVEELKKW-----KSKKKLTEEALSETQKREKELELKKDELLK 251
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 236 KSKKVEKNSARDKKEK-EKTDTRNSDGTYKTSEREKEQSSR 117
K +K E++ R+K+E+ EK R+SD K + +KE+ R
Sbjct: 191 KREKEERHDRREKRERHEKRSARDSDDRKKHKKEKKEKKRR 231
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYR--DKNRSVNSGSER 326
T+ SE + K+D K VE EK E + S + + K+AE+ T + + +++
Sbjct: 447 TSAKSEEPSKKKDKKKKK-KVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKK 505
Query: 325 KSSGKDEEYSEQNSSNK 275
K ++EE +E + K
Sbjct: 506 KRKHEEEETTETPAKKK 522
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 30.7 bits (66), Expect = 0.67
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
KS E + +D K G++ E+ E + S EFE + ++ + V ERK+
Sbjct: 438 KSIEAQKRAKDEIKMGISKRIEEKEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQ 497
Query: 313 KDEEYSEQNSSNK 275
E E K
Sbjct: 498 NSERGFESKIEQK 510
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 30.7 bits (66), Expect = 0.67
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRD-KNRSVNSGSERKSS 317
KS +G S +G + R S K +R+ ++K S RD ++ VN E KS
Sbjct: 732 KSDRASSGSSASSSNGSSA-RTVPHSRKHNRKLQSKNVASKVSRDVEDERVNFKVENKSR 790
Query: 316 GKDEEYS---------EQNSSNKSFNDG 260
++E+ S EQN SN G
Sbjct: 791 KEEEDTSGETKGAVRLEQNESNSKETPG 818
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 30.7 bits (66), Expect = 0.67
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = -2
Query: 406 SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLR 227
S+ EN+ ++S+Y + + S +S SE N NK R P R
Sbjct: 405 SKGEENETTKTSSYSSRKVLLPPNSTTSTSSGPCSSSELNEHNKPSPHSSPRNNGTPVHR 464
Query: 226 RLKRILPEIKRKRKKLTQEIL 164
L ++ EI K K++ E L
Sbjct: 465 TLPGLINEIMNKGKRMAYEEL 485
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 0.67
Identities = 22/113 (19%), Positives = 48/113 (42%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T + E + + + S + E+E+++ + E E + + KN+ + S S
Sbjct: 935 TKSTLEAALMQAERNISDIISEKEEAQGRTATAEMEQEMLQKEASIQKNKLTEAHSTINS 994
Query: 319 SGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILT 161
+ +E N + S D ++ T L+++ E + +R K+ + LT
Sbjct: 995 LEETLAQTESNMDSLSKQIEDDKVLTTSLKNELEKLKIEAEFERNKMAEASLT 1047
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 30.3 bits (65), Expect = 0.89
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNK-KSREFENKEAESSTYRDKNRSVNSGSERK 323
T E+ + +G E ++ E+ K +S+ E E DK + R+
Sbjct: 52 TEDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKEDKEEEKEEAA-RE 110
Query: 322 SSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLL 143
++EE + + S + +++P LRR KR KK++ +R K
Sbjct: 111 DKEEEEEAVKPDESASQKEEAKGASSSEPQLRRGKRKRGTKTEAEKKVSTPRAKKRAKTT 170
Query: 142 SAK 134
A+
Sbjct: 171 KAQ 173
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 335
+ E T + ++ T + + ++ V + E + EN+E E++ K
Sbjct: 34 VVEATTTQETQP-TQETEETEDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGN 92
Query: 334 SERKSSGKDEEYSEQNSSNKSFND----GDARLTTKPNLRRLKRILPEIKR-KRKKLTQE 170
E K+EE E +K + D + K + P+++R KRK+ T+
Sbjct: 93 EEEAKEDKEEEKEEAAREDKEEEEEAVKPDESASQKEEAKGASSSEPQLRRGKRKRGTKT 152
Query: 169 ILTERTKLLSAKK 131
++ AKK
Sbjct: 153 EAEKKVSTPRAKK 165
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 30.3 bits (65), Expect = 0.89
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK-- 323
+ S+ KT + GSK ++ +++ + E++EAE +R + R S ER+
Sbjct: 125 SNSAAAKTRRYSGSKRSFDFDQNGGDADAEDGG-EDEEAERRIHRQRQRGGESPRERRRR 183
Query: 322 --SSGKDEEYSEQNSSNK---SFNDGDARLTTKPNLRR 224
S +D+ S ++ S + S N G +R ++ RR
Sbjct: 184 TPSRERDDSKSNRSGSRERGSSGNGGGSRRVSRSPGRR 221
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 406 SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE--QNSSNKSFNDGD 257
SRE ++ ++ S R++ S N G R+ S SE NSS S N +
Sbjct: 186 SRERDDSKSNRSGSRERGSSGNGGGSRRVSRSPGRRSEINPNSSGNSVNSSN 237
>At4g35080.2 68417.m04981 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 336
Score = 30.3 bits (65), Expect = 0.89
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 373 STYRDKNRSVNSGSERKSSGKDEEYSE--QNSSNKSFNDGDARLTTKPNLRRLKRILPEI 200
ST+R ++R V+S S SS Y+ N++N SFN +KPN L RI
Sbjct: 39 STHRPESRRVSSIS-CNSSQIPSLYTPIGSNTTNNSFNGSPKSDESKPNPGFLTRIATSA 97
Query: 199 KRKRKKLT 176
+RK L+
Sbjct: 98 SEQRKTLS 105
>At4g35080.1 68417.m04980 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 365
Score = 30.3 bits (65), Expect = 0.89
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 373 STYRDKNRSVNSGSERKSSGKDEEYSE--QNSSNKSFNDGDARLTTKPNLRRLKRILPEI 200
ST+R ++R V+S S SS Y+ N++N SFN +KPN L RI
Sbjct: 39 STHRPESRRVSSIS-CNSSQIPSLYTPIGSNTTNNSFNGSPKSDESKPNPGFLTRIATSA 97
Query: 199 KRKRKKLT 176
+RK L+
Sbjct: 98 SEQRKTLS 105
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVER--EKSESNKKSREFENKEAESSTYRDKN-RSVNSGSERK 323
++++ KT + ++ E EK+E+ ++ +E ++ + ++KN + V S S+
Sbjct: 89 ENNQVKTDSENSAEGNQVNESSGEKTEAGEERKESDDNNGDGDGEKEKNVKEVGSESDET 148
Query: 322 SSGKDEEYSEQNSSNKSFNDGD 257
+ + + E NKS DG+
Sbjct: 149 TQKEKTQLEESTEENKS-EDGN 169
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
SSE + D S++ + E+E+S+ KK +F ++ E + + R V S + S K
Sbjct: 310 SSEDSSSPTDESQNDGSAEKEESDEVKKVEDFVTEKKEELSKEELGRLVASRWTGEKSDK 369
Query: 310 DEE 302
E
Sbjct: 370 PTE 372
>At5g25790.1 68418.m03061 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9Y4I5 Tesmin
(Metallothionein-like 5, testis-specific) {Homo
sapiens}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 408
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 257 CSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSERE 135
C + + S+K + SAR K +EK DT S G Y ER+
Sbjct: 295 CDEEHEIGSEK--ETSARVKTSQEKEDTDTSSGIYLEQERQ 333
>At5g19310.1 68418.m02301 homeotic gene regulator, putative similar to
SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1064
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTV---EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK 323
K ++TKT +GSK+ + + EK E ++ +E KE+E +K +++K
Sbjct: 982 KRTDTKTRMSNGSKAEAVLSESDEEKEEEEEERKEESGKESEEE--NEKPLHSWKTNKKK 1039
Query: 322 SSGKDEEYSEQNSSNKSFNDGDAR 251
S S NS K + G R
Sbjct: 1040 RSRYPVMTSSPNSRGKGSSKGSKR 1063
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 442 TVEREKSESNKKSREFENKEAESSTYR-DKNRSVNSGSERKSSGKDEE 302
TV R +S N + E E + +TYR DK +S G++ S+G ++
Sbjct: 701 TVRRLQSSQNPQEEEEEAISKDKNTYRSDKGKSQVVGTDSSSTGSKQQ 748
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = -2
Query: 403 REFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRR 224
R +E+ E E +T + N SV + + R S G + + KS N +TKPN
Sbjct: 270 RPWESSEKEQNTTNNDNSSVKNSTNRNSQGGE--------TAKSSNRNKLNSSTKPNTPS 321
Query: 223 LKRILPEIKRKRKKLTQEI 167
RK++ + I
Sbjct: 322 ASSTATRNPRKKRPIPSSI 340
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/107 (24%), Positives = 46/107 (42%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 290
K+D ++ T REK + +KS + S R + G SSG++ Y
Sbjct: 333 KKDREQAKATARREKKNAKRKSTTDSSASGSSLKKRKVCLETDIGC---SSGREVTYRVT 389
Query: 289 NSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTK 149
+ K N G TK + +L ++R ++K+++E +T K
Sbjct: 390 GENGK--NMGKLEHGTKESADKL-----SLRRTQRKISKENVTREVK 429
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/107 (24%), Positives = 46/107 (42%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 290
K+D ++ T REK + +KS + S R + G SSG++ Y
Sbjct: 333 KKDREQAKATARREKKNAKRKSTTDSSASGSSLKKRKVCLETDIGC---SSGREVTYRVT 389
Query: 289 NSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTK 149
+ K N G TK + +L ++R ++K+++E +T K
Sbjct: 390 GENGK--NMGKLEHGTKESADKL-----SLRRTQRKISKENVTREVK 429
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/109 (18%), Positives = 46/109 (42%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
E + + E + KRD S + + + +KSR+ + + + D + S +S +
Sbjct: 224 EGRSKRRKERRGRKRDEDDSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDD 283
Query: 328 RKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKK 182
R+ +++ + +S D +R+ + R K+ RK ++
Sbjct: 284 RRQKRRNKVAASSDSEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKERE 332
>At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 371
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
ERE+ E+ +K++ NKEAE+ T + + S E +D++ + + ++ +
Sbjct: 296 EREQEETEQKAK---NKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMDELDELE 352
Query: 256 ARLT 245
A L+
Sbjct: 353 ASLS 356
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 400 EFEN-KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
E+E +E E + + KN+ +G+ KSSG E+ S++ + + +D D
Sbjct: 292 EYEREREQEETEQKAKNKEAEAGTS-KSSGDAEQSSKEVNEEEEDDDDD 339
>At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to At2g17960, At4g36090; contains
PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 507
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKR-ILPEIKRKRKKLTQEILTERTK 149
++EE E++SS K F+ + KP L R +R L I KRKK I ER K
Sbjct: 153 EEEEEEERDSSRKGFDASSMKTPEKPKLSRDQRENLRLINVKRKK--DFICLERVK 206
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN---S 338
+TG +SS + ++ K+ R+K+ S S+ + EA+SS RS N
Sbjct: 822 KTGKKQSSGEEDSEQSEGKTSDVDARDKNGSLDDSKVRKGIEADSSPRTKDTRSENGHDD 881
Query: 337 GSERKSSGKDEEYSEQNSSN 278
G S+GK Y + ++
Sbjct: 882 GESTASAGKTVNYDSHDETD 901
>At5g64810.1 68418.m08150 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 194
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS----VNSGSERK 323
SSET TG+ GS S T+ +++S +N+ S+E + + + RS ++ G + +
Sbjct: 58 SSETFTGESGGSGSATTLSKKES-TNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWR 116
Query: 322 SSGKDEEYSEQNSSN 278
GK + N N
Sbjct: 117 KYGKKSVKNNINKRN 131
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSE-----SNKKSREFENKEA---ESSTYRDKNRSVN 341
++SSE +T +DG T E+ +SE S++K E E++ A + ++++ N
Sbjct: 2143 SQSSEPETINQDGDLDPETDEKVESERTPLHSDEKQEEQESENALNKQCEPIEAESQNTN 2202
Query: 340 SGSERKSSGKDEEYSEQNSSNKSFND 263
+ E ++ +DEE + + N +D
Sbjct: 2203 AEEEAEAQEEDEESMKMVTGNSLSDD 2228
>At5g12230.1 68418.m01435 expressed protein
Length = 221
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/80 (16%), Positives = 40/80 (50%)
Frame = -2
Query: 487 SETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 308
S++K+ +D + + + +++ ++ ++K + S +DK++ + ++
Sbjct: 116 SKSKSESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDS 175
Query: 307 EEYSEQNSSNKSFNDGDARL 248
++S+++ K +DGD L
Sbjct: 176 GDHSKKHHDKKRKHDGDEDL 195
>At5g05240.1 68418.m00560 expressed protein similar to unknown
protein (gb AAD32815.2)
Length = 530
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -2
Query: 502 GTNKSSETKTGKRDGSKSGVTVEREKSESNKKS--REFENKEAESSTYRDKNRSVNSGSE 329
G N +E G+ S S V + +K++ + +N +A SS D SV S
Sbjct: 74 GKNIKTELLVGQEVKSSSSKLVLNTDVDCDKRALLKRCDNADAVSSCLNDDLTSVCSSRI 133
Query: 328 RKSSGKDEEYSEQNSSNKS 272
+ + + YSE SSN S
Sbjct: 134 SQKTSSMDVYSECGSSNGS 152
>At3g57300.1 68416.m06378 transcriptional activator, putative similar
to transcriptional activator SRCAP [Homo sapiens]
GI:5106572; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1507
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 531 KDTDDKYSRQEPINHQKRRQASVMARRAASQSKGKNPNPTR 409
+D D + + QEP+ ++ ++S RRAAS K + P +
Sbjct: 1419 EDVDRQDNGQEPLEEPEKPKSSNKKRRAASNPKARAPQKAK 1459
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -2
Query: 466 RDGSKSGVTVEREKSESNKKSREFENKEAESSTY--RDKNRSVNSGSERKSSGKDEEYSE 293
R+ S+ RE+ E +K R S+Y R++ RS + +ER++ D E
Sbjct: 92 RESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRR 151
Query: 292 QNSSNKSFN 266
+++ ++S +
Sbjct: 152 RSNRSRSLS 160
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/92 (19%), Positives = 37/92 (40%)
Frame = -2
Query: 466 RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 287
R + V+RE+ S +S E N+ + + R NRS + R+ +++ ++
Sbjct: 117 RSSERRSSYVDRERRRSRSRSAERRNRYGDRESRRRSNRSRSLSPRRERRSREDVKEKKP 176
Query: 286 SSNKSFNDGDARLTTKPNLRRLKRILPEIKRK 191
++ D + ++K L E K
Sbjct: 177 DYSRLIKGYDEMSAAEKVKAKMKLQLDETAEK 208
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = -2
Query: 508 ETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 329
+ G + ++ +GK DG + K +K R+++ +++ D + +GS+
Sbjct: 113 DEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSD 172
Query: 328 R-KSSGKD-------EEYSEQNSSNKSFNDG 260
+ +S +D E Y+E+ S K + G
Sbjct: 173 KTESKAQDHARSPGTENYTEKRSRRKRDDHG 203
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 230 KKVEKNSARDKKEKEKTDTRNSDGTY 153
K+ E+ + DKK KEK D RN+ TY
Sbjct: 551 KEAEEFAEEDKKVKEKIDARNALETY 576
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 230 KKVEKNSARDKKEKEKTDTRNSDGTY 153
K+ E+ + DKK KEK D RN+ TY
Sbjct: 551 KEAEEFAEEDKKVKEKIDARNALETY 576
>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
strong similarity to gi:4467359
Length = 1116
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = -2
Query: 532 KGY*R*IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKN 353
+G+ + +F N+ + D K G + K + ++K E E + + Y D+
Sbjct: 354 EGFFKKLFHESKNEDDKVSNAVDDEEKDGFLKKLFKEKFDEKRNGNERNETDETVYTDET 413
Query: 352 RSVNSGSE 329
++G E
Sbjct: 414 SGEDNGRE 421
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -1
Query: 266 RRRCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVN 111
RR D + K ++ EK ++KK KE+ R KE ++V+
Sbjct: 43 RRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVD 94
>At4g00480.1 68417.m00066 myc-related transcription factor (MYC1)
identical to ATMYC1 GI:1853965 from [Arabidopsis
thaliana]
Length = 526
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -2
Query: 514 IFETGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRD 359
I ET N TK G VTV R+K+ K +E E +YRD
Sbjct: 415 IEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRD 466
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 28.7 bits (61), Expect = 2.7
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = -2
Query: 478 KTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 299
++ +RD + G +R+ S ++ ++ + + R+K R + S ER+ K+ E
Sbjct: 257 RSKERDMDREGSIRDRDSEGSKRRDKDSDRRRERE---REKRREIESDRERRKE-KERER 312
Query: 298 SEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
S K +GD L + N R R + +K +E
Sbjct: 313 SIDRDRRKE-REGD-YLRDRANERGRSRDRTRYNSRERKREKE 353
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = -2
Query: 430 EKSESNK-KSREFENKEAESSTYRDK----NRSVNSGSERKSSGKDEEYSEQNSSNKSFN 266
EK+ K +S+E +KE ESS R+K +R +R+S +D + ++ ++
Sbjct: 311 EKANIRKERSKERNSKERESSKDREKEQETSREHRRDYDRRSRDRDRHHDRDREQDRDYD 370
Query: 265 DGDARLTTKPNLRRLKRILP 206
+R + R R P
Sbjct: 371 RSHSRSRRRSRSRSRSRDRP 390
>At2g33480.1 68415.m04104 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 268
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -2
Query: 358 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKL 179
K RS NS S+RK K+E +E+ + + + + + +T P R + KR+R++
Sbjct: 160 KKRS-NSNSKRKEDEKEEVENEKETETEREREEENKKSTCPIFYDFMRKDTKKKRRRRRC 218
Query: 178 TQEILTERT 152
LT T
Sbjct: 219 CDLNLTPAT 227
>At1g79200.1 68414.m09234 expressed protein
Length = 159
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/120 (15%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
S E K + S + EK + ++ + + + + + S +DK + S K
Sbjct: 7 SKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSKKSK 66
Query: 310 DEEYSEQNS-SNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAK 134
D++ ++++ S+ +G L+ + + +K +++ ++ TE + L ++
Sbjct: 67 DDKPKKKHTESDHKLKEGIPELSMEDYFSKNNEFATWLKEEKRTYFNDLTTEAARGLFSR 126
>At1g73960.1 68414.m08565 expressed protein similar to TATA binding
protein associated factor (GI:2827282) [Homo sapiens];
similar to Transcription initiation factor TFIID 150 kDa
subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325)
[Drosophila melanogaster]
Length = 1390
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 251 ADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
A QT S EK +DK++KEK R D Y +R K++ R
Sbjct: 1278 ASLQTLSIGKEKEKKKDKEKKEKKRKR-EDPVYLEKKRLKKEKKR 1321
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = -2
Query: 496 NKSSETKTGKRDGSK-SGVTVEREKSESNKKSREFE-NKEAESSTYRDKNRSVNSGSERK 323
+KS E+ K+D SK S E + + K R+ E +++ E S RD+ +S + +R+
Sbjct: 34 SKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRE 93
Query: 322 SSGKDEE 302
S KD +
Sbjct: 94 RS-KDRQ 99
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = -2
Query: 505 TGTNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENK---EAESSTYRD---KNRSV 344
T + + G+R+GS+ E+S K +E +K E + RD K+R
Sbjct: 61 TKDRRGRSVERGEREGSRDREKHHHERSHEGSKEKESRSKRKDREEENGARDGKKKSRFA 120
Query: 343 NSGSERKSSGKDEEYSEQN 287
+ ER+S +D +N
Sbjct: 121 DGNGERRSRFEDVAIEVEN 139
>At1g21390.1 68414.m02676 expressed protein
Length = 248
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKK--SREFENKEAESSTYRDKNRSVNSGSERKSS 317
+++ K K+ V+ SE K +E+ N+ +ESST R + S N+ +SS
Sbjct: 156 TTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWNRMSESSTKRSGSSSSNNSIRSRSS 215
Query: 316 GKDEEYS 296
+DE+ S
Sbjct: 216 LRDEKSS 222
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.7 bits (61), Expect = 2.7
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = -2
Query: 508 ETGTNKSSETKTGKR---DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRS-VN 341
+T K TK+ + DG K+G + ++EK+++ + AE+ + + V+
Sbjct: 445 KTNPAKEDLTKSNVKKHEDGIKTGKSSKKEKADNGLAKTSAKKPLAETMMVKPSGKKLVH 504
Query: 340 SGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILT 161
S +++K+S + S+KS D+R TT P ++ ++ P+ K K++ E +
Sbjct: 505 SDAKKKNSEGASMDTPIPQSSKS-KKKDSRATT-PATKKSEQ-APKSHPKMKRIAGEEVE 561
Query: 160 ERTKLL 143
T L
Sbjct: 562 SNTNEL 567
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/103 (20%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = -2
Query: 478 KTGKRDGSKSGVTVEREKSESNKKSREFE--NKE--AESSTYRDKNRSVNSGSERKSSGK 311
+T K+ +G + + ++S KK+ E NK+ A S ++ + + E++ +
Sbjct: 487 RTPKKSSPAAGSSSSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDDEEEEKEQEVE 546
Query: 310 DEEYSEQNS-SNKSFNDGDARLTTKPNLRRLKRILPEIKRKRK 185
+EE +N +KS ++ ++ N+ + E K+K++
Sbjct: 547 EEEEENENGIPDKSEDEAPQLSESEENVESEEESEEETKKKKR 589
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = -2
Query: 493 KSSETKTGKR-DGSKSGVTVEREKSESN----KKSREFENKEAES-STYRDKNRSVNSGS 332
K+S+ +GK + SG V+ K E + K + E K+ E S DK V
Sbjct: 22 KTSDAISGKEVQENASGKEVQESKKEEDTGLEKMEIDDEGKQHEGESETGDKEVEVTE-E 80
Query: 331 ERKSSGKDEEYSEQNSSNKSFND 263
E+K G+D+E E + ++ +D
Sbjct: 81 EKKDVGEDKEQPEADKMDEDTDD 103
>At5g27860.1 68418.m03342 expressed protein
Length = 177
Score = 28.3 bits (60), Expect = 3.6
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Frame = -2
Query: 496 NKSSETKTGKRDGSKSGVTVEREKSESNKKS---REFENKEAESSTY--RDKNRSVNSGS 332
+ S + + D S E EKS +KK ++ ++KE S R KNR G
Sbjct: 57 HSSDSSDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGE 116
Query: 331 ERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEI-KRKRKKLTQEILTER 155
SSG N+ +DG+ R K+IL ++ K K K + E
Sbjct: 117 GEGSSG---PVKLSKFLNRDKDDGERRSAVSG-----KKILLKVDKSKEDKAAESKRNEL 168
Query: 154 TKLLSA 137
K L+A
Sbjct: 169 LKFLNA 174
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K + K K D + T E K +SNKK E E + AE ++K ++K
Sbjct: 457 KKDKKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEK--------KKKRKH 508
Query: 313 KDEE 302
++EE
Sbjct: 509 EEEE 512
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -1
Query: 260 RCSADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVN 111
R +A+ + ++VEK A+D K KEK ++S+ K E EKE+ ++
Sbjct: 418 RSNAEQPKEKEEVEKEKAKDTK-KEKGKEKDSE---KKMEHEKEKGKSLD 463
>At1g70505.1 68414.m08114 expressed protein
Length = 338
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 460 GSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 302
G S V++ R +S N ++R + E TYR + NS + SSG D E
Sbjct: 148 GLGSLVSIYRFRSPDNGENR-VSIVDEEQGTYRPPGNAENSNVFKSSSGHDRE 199
>At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing
protein
Length = 573
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -2
Query: 472 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 293
G+ GS+ G + + + K SR+ E ++T RD S NSG R S ++E+ S
Sbjct: 470 GEEGGSEYGGYEDETQEKEEKPSRDKER----ATTERDW--SENSGDRRHKSHREEKDSH 523
Query: 292 QNSSNKSFNDGD 257
+ + D D
Sbjct: 524 REYKQQRDRDSD 535
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNS--GSER--KSSGKDEE 302
+ G G +S+ ++ +E N+ A +S R++ NS GS+R KSS K+EE
Sbjct: 2 RTSGDVYGADTGSSRSDEDRGFKEDLNESA-TSPMRNRLDDSNSRPGSQRFVKSSRKEEE 60
Query: 301 YSEQNSSNKS 272
+SS+K+
Sbjct: 61 TDSDSSSSKN 70
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 27.9 bits (59), Expect = 4.7
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K E KR GSK+ E+E E K ++ ++ + T RDK S+ +R++
Sbjct: 119 KQQEVVESKRKGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKM 178
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTE--RTKL 146
EE ++ ++ + L+TK + + ++K + LTQ E RTKL
Sbjct: 179 LMEECKRVSTEGQTLR---SDLSTKFQDAIMDVSIKLDEQKNESLTQLKENEMLRTKL 233
>At5g50840.1 68418.m06298 expressed protein
Length = 404
Score = 27.9 bits (59), Expect = 4.7
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K E KR GSK+ E+E E K ++ ++ + T RDK S+ +R++
Sbjct: 118 KKQEVVESKRKGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKM 177
Query: 313 KDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTE--RTKL 146
EE ++ ++ + L+TK + + ++K + LTQ E RTKL
Sbjct: 178 LMEECKRVSTEGQTLR---SDLSTKFQDAIMDVSIKLDEQKNESLTQLKENEMLRTKL 232
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9 (SP:Q9NSI6)
{Homo sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (4 copies)
Length = 1677
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = -2
Query: 385 EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILP 206
E E D+N S + E SSGK++E ++S +S + + L+R
Sbjct: 777 EPEVDILSDENDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRR--- 833
Query: 205 EIKRKRKKLTQEILTERTKLLSAKKNNLLE 116
KRK+ K I+T + + + + LE
Sbjct: 834 -SKRKKHKKEAGIMTSSGRRVKKRNFDELE 862
>At5g43130.1 68418.m05265 transcription initiation factor IID
(TFIID) component TAF4 family protein weak similarity to
SP|O00268 Transcription initiation factor TFIID 135 kDa
subunit {Homo sapiens}; contains Pfam profile PF05236:
Transcription initiation factor TFIID component TAF4
family
Length = 712
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 424 SESNKKSRE-FENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDARL 248
+E N+K +E +E K+AE+ + + S G S KD+E + + D D
Sbjct: 543 NEMNQKVKEEWEKKQAEAEKLKKPSES-EEGDGGVDSEKDKEDNRSKGVKGNKEDDDKMR 601
Query: 247 TTKPNL 230
TT N+
Sbjct: 602 TTAANV 607
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 224 VEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRV 114
VE+N K KE + +S+ + KT+ EKE S++
Sbjct: 619 VEENETESKMMKEPHEELSSEMSLKTAAEEKETESKM 655
>At2g28150.1 68415.m03419 expressed protein
Length = 540
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS--GK 311
ETK K+D + S +++R S + ++ + AE+ + + N S + SS GK
Sbjct: 407 ETKLQKKDAADSNASLKRSSSYNGDRASN-QMGVAENGDSKPDSSKNNPSSRKASSILGK 465
Query: 310 DEE-YSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKR 194
+ SE+ + + TTK + KRI +++
Sbjct: 466 QQPLVSEKRRDSSEDTTKNIPCTTKTHDACSKRITESLRK 505
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/108 (25%), Positives = 40/108 (37%)
Frame = -2
Query: 469 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 290
K D + TVERE +S RE E + + DK + Y +Q
Sbjct: 323 KNDALEQLNTVEREMQDS---LRELEAIKPLYESQVDKENQTSKRINELEKTLSILYQKQ 379
Query: 289 NSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKL 146
+ + N + + LKR+L + +KL EIL T L
Sbjct: 380 GRATQFSNKAARDKWLRKEIEDLKRVLDSNTVQEQKLQDEILRLNTDL 427
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 424 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
SE K+ E + EAE YR+K + + + EE+ +QN + +++D
Sbjct: 378 SELAKREEEMKELEAEFEVYREKYGCLTDQEDAR-----EEFHKQNGNASAYDD 426
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/108 (21%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Frame = -2
Query: 421 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS----FNDGDA 254
E+ +K + +NKE E N++ + E+K KD++ ++N +K+ +
Sbjct: 3 ETEEKVKNHDNKEEEH------NKAEKA--EKKEKKKDKDKKDKNEDDKNGGGEEGEDQE 54
Query: 253 RLTTKPNLRRLKRILPEIKRKRKKLTQEI--LTERTKLLSAKKNNLLE 116
+ + K + + K PE K+ +KL ++ + E+ + + KK+ +++
Sbjct: 55 KKSKKKDKKAKKEKNPEDKKDPEKLKMKLQKIEEKIQAMVLKKDEIVK 102
>At5g55300.1 68418.m06891 DNA topoisomerase I identical to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 916
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = -2
Query: 481 TKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 302
+K K D S S + + K+ + +A + ++R++ +++ + KD +
Sbjct: 297 SKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARN-VVSPRSRAMTKNTKKVT--KDSK 353
Query: 301 YSEQNSSNKSFNDGDARLTT 242
YS + S+ S DG + TT
Sbjct: 354 YSTSSKSSPSSGDGQKKWTT 373
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 433 REKSESNKKSREFENKEAESSTYRDKNRSVNSG----SERKSSGKDEEYSEQNSSNKSFN 266
+EK E S ++E +S R+K+ SG S +SSG + N ++ N
Sbjct: 801 KEKVEEKTSSLTLGSEEEKSRKKREKSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRN 860
Query: 265 DGDA 254
D ++
Sbjct: 861 DSES 864
>At5g05050.1 68418.m00536 peptidase C1A papain family protein weak
similarity to berghepain-2 [Plasmodium berghei]
GI:17978639; contains Pfam profile PF00112: Papain
family cysteine protease
Length = 299
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -2
Query: 472 GKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 293
G+ G+KS E + K + SS+ KN+S S ++ + +DEE+++
Sbjct: 30 GRNGGNKSDSDEESAVVGVGAGRKGKNKKSSSSSSSSKKNKSPAKASTKRFTKEDEEWAK 89
Query: 292 QNSSNKSFNDGD 257
S+ + N D
Sbjct: 90 DLPSDFTTNCKD 101
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 242 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVN 111
+ K KK EK +KKEK+++ + + K ++EK++ + N
Sbjct: 399 EEKEKKEEKKE--NKKEKKESKKEKKEHSEKKEDKEKKEQTHQN 440
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 454 KSGVTVERE----KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 287
K +T+E++ + E +K E E KE + S R+K + K GK+++ E +
Sbjct: 520 KEIITLEKQVKLLEEEEKEKREEEERKEKKRSKEREKKLRKKERLKEKDKGKEKKNPECS 579
Query: 286 SSNKSFN 266
+ N
Sbjct: 580 DKDMLLN 586
>At3g23540.1 68416.m02962 expressed protein ; expression supported
by MPSS
Length = 568
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 502 GTNKSSETKTGKRDGSKSGVTVEREKSESNK 410
G+ E++TG G+K+ VTVER S K
Sbjct: 520 GSLSQKESETGDVPGTKATVTVERSSSAPGK 550
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/54 (18%), Positives = 25/54 (46%)
Frame = -2
Query: 424 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
+++N + N + + +D N + N+ + ++G D + N +N N+
Sbjct: 82 NDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNN 135
>At2g32250.2 68415.m03942 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 805
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 463 DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
+ S SG + + +FE+KEA YR+ RSV G K+S + +
Sbjct: 22 EASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSK 74
>At2g32250.1 68415.m03941 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 807
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 463 DGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
+ S SG + + +FE+KEA YR+ RSV G K+S + +
Sbjct: 22 EASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSK 74
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 331 ERKSSGK-DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQEILTER 155
E K+SG+ +++ S N S ++ D + T + + + + K+K+KK T++ +T++
Sbjct: 231 EDKASGECEDKSSNSNVSWRNIGDCNNSDETPSSTQSFSYPITKKKKKKKKATKKKMTQQ 290
Query: 154 TKLLSAKK 131
+ KK
Sbjct: 291 QQQQKQKK 298
>At1g61040.1 68414.m06872 plus-3 domain-containing protein contains
Pfam profile PF03126: Plus-3 domain
Length = 643
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -2
Query: 433 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 254
R+ S+ SR+F SST R S N S +S S+ SN D D
Sbjct: 203 RDASKGGSGSRDF------SSTKRKPLASSNLSSSSQSDSDSRSQSDDEGSNGGMLDSDD 256
Query: 253 RLTTKPNLRRLKRILPEIKRKRKKLTQEIL 164
+ P +K E+ +R KL + ++
Sbjct: 257 DRSDVPTFEDVK----EVTIRRSKLAKWLM 282
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = -2
Query: 493 KSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSG 314
K +E GK ++ E EK ++S++ AES + N G + +
Sbjct: 345 KLAEETWGKHKDAEKAAFDEAEKKREEEESKD---APAESDAEEEAEDDDNEGDDSDNES 401
Query: 313 KDEEYSEQNSSNKS 272
K EE E + ++
Sbjct: 402 KSEETKEAEETKEA 415
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -2
Query: 352 RSVNSGSERKSSGK----DEEYSEQNSSNKSFNDGDARLTTKPNLRRLKRILPEIKRKRK 185
+ V +G ER S K DEE + K GD+ + K L ++ E ++K++
Sbjct: 230 KQVATGKERGESSKLLFGDEENDKVERGEKRKRSGDSGRSEKERRSALDELMKEEEKKKE 289
Query: 184 KLTQE 170
++ ++
Sbjct: 290 RMNRK 294
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 379 ESSTYRDKNRSVNSGSERKSSGKDEEYSE 293
++ + R+ RS + GSER+ GK++E+ E
Sbjct: 288 QARSSREGYRSGSVGSERRGKGKEKEFGE 316
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = -1
Query: 248 DXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 126
+ + K ++ +K D+K+KE+ + + K E++KE+
Sbjct: 191 EDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEE 231
>At1g16220.1 68414.m01942 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 491
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 254 SADXQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRV 114
S + T+S + + DKKE+ T+T + ++ E + +S R+
Sbjct: 394 SHEESTESVTITSSKDADKKEEASTETNETVPVWEIKEEKTPESCRI 440
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -2
Query: 499 TNKSSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKS 320
T+KS + + + G+ R + +NK+ + + ++S +D +G+E
Sbjct: 127 TSKSRKDMDAELAPRREGLRPRRSTTIANKRLKTESGADQDTSEEKDGQDETENGNELDD 186
Query: 319 S--GKDEEYSEQNSSNKSFNDGD 257
+ G++E +E + + DG+
Sbjct: 187 ADDGENEVEAEDEGNGEDEGDGE 209
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 433 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
REKS+ N R N++ S R RSV+ G S DE+ E S+ ++D
Sbjct: 631 REKSQYNG-GRLLVNEDEHPSKRRVSFRSVDHGEASVISLGDEDEEEDGSNGVEWDD 686
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/85 (22%), Positives = 34/85 (40%)
Frame = -2
Query: 490 SSETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 311
S+E +T + D + V + + + S E E ++ + + S +SGS S G
Sbjct: 498 SAEKRTRRGDAGEEDVDIGEDIPIEDYPSVEIE-RDGTAVAAAASSGSSSSGSSSSSGGS 556
Query: 310 DEEYSEQNSSNKSFNDGDARLTTKP 236
+ + S +D DA P
Sbjct: 557 SSSSDSGSGGSSSGSDSDADSVQSP 581
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 534 RKDTDDKYSRQEPINHQKRRQASVMARRAASQSKGKNPNPT 412
+ DTDD+ E K++ +S +S SKGK+ P+
Sbjct: 321 KTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS 361
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -2
Query: 457 SKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 278
++ + +E E + +++ KEA T D ++SV S RKS K+ E +++ SN
Sbjct: 363 TRKRLDLENEYIDHTEQNLPLNGKEA---TIEDDDKSVVS---RKSEEKEVEMNDETDSN 416
Query: 277 K-SFNDGDARLTTKPNLRRLKR 215
K +D ++ L RL +
Sbjct: 417 KEECDDSSCSEESESELCRLNK 438
>At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative
Length = 739
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/90 (21%), Positives = 42/90 (46%)
Frame = -2
Query: 430 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDAR 251
+K + + + E+K+ + R+K R ++ + +DEE E+ + S + D
Sbjct: 640 KKVGAEMRKADIEDKKVDKERRREK-RMKQKIKRKRGAMEDEEEEEEEDHDGSGSSDD-- 696
Query: 250 LTTKPNLRRLKRILPEIKRKRKKLTQEILT 161
T N +R K+I+ + + K+ + L+
Sbjct: 697 -ETGRNSKRAKKIVSDNEENGGKINTDSLS 725
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 221 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
E+ +A+DK ++E+ R + K REKE S+
Sbjct: 231 EQKAAKDKGKEEERLVRGKEADDKRKPREKESESK 265
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 221 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 117
E+ +A+DK ++E+ R + K REKE S+
Sbjct: 231 EQKAAKDKGKEEERLVRGKEADDKRKPREKESESK 265
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -2
Query: 487 SETKTGKRDGSKSGVTVEREKSESNKK---SREFENKEAESSTYRDKNRSVNSGSERKSS 317
+E + +R + G ++E E+ SN + S ++E + T R R SG E KSS
Sbjct: 366 TEGRNEERRKKEEGKSMEIEEYRSNPQEVTSVVCLDREKDEETARQVFRE--SGKEEKSS 423
Query: 316 GKDEEYSE 293
DEE S+
Sbjct: 424 QNDEETSK 431
>At4g09890.1 68417.m01620 expressed protein
Length = 87
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 340 SGSERKSSGKDEEYS-EQNSSNKSFNDGDARLTTKPNLRRLKRI 212
S +E SS +E+ +QN SN S+N + T P ++R KR+
Sbjct: 7 SYTEYSSSFSTDEFGYDQNRSN-SYNFNGPCINTDPEMKRKKRV 49
>At3g61380.1 68416.m06869 expressed protein
Length = 718
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1
Query: 263 RRCSADXQTKSKKVEKNSARDKKE---KEKTDTRNSDGTYKTSEREKE 129
+ CS + +SK EK+ DK+E E+T + T +SE K+
Sbjct: 254 QNCSTQEEIQSKSEEKHDVSDKEEPFCDERTTEDGKEETIYSSEDSKK 301
>At3g45400.1 68416.m04901 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 475
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 468 LPVFVSDDLLVPVSNIYRQYPFSIFV 545
+PV +SDD+ +P ++ FS+FV
Sbjct: 355 VPVIISDDIELPFEDVIDYSEFSVFV 380
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/74 (21%), Positives = 30/74 (40%)
Frame = -2
Query: 436 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
E+E S ++ + +E +S RD++ + ERK G+ + D +
Sbjct: 21 EKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGERDREVGDKRRRSGREDTE 80
Query: 256 ARLTTKPNLRRLKR 215
R T+ + R R
Sbjct: 81 KRRRTRTDDERYSR 94
>At3g12010.1 68416.m01488 expressed protein contains Prosite
PS00626: Regulator of chromosome condensation (RCC1)
signature 2
Length = 685
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = -2
Query: 340 SGSERKSSGKDEEYSEQNSSNKS---FNDGDARLTTKPNLRRLKRILPEIKRKRKKLTQE 170
S + ++ K+ E SE ++SN++ + DG L L + ++L +I + ++
Sbjct: 313 SETSSQAVNKEIESSESSTSNENIVMYEDGWTFLVPDLILDQTNKVLWKIHLDLEAISAS 372
Query: 169 ILTERTKLLSAKKNNLLE*IKVRAATLGIPRS 74
++RT LL + LE K + LGI R+
Sbjct: 373 S-SDRTSLLEFLQRRKLEANKAKQLCLGIARA 403
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 415 NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 269
N+++ ++ N +Y ++ V +G+E S D E N NKS+
Sbjct: 461 NEEAGDYLNHHISFGSYNIEDGEVENGNEEGSGESDLHSIELNIDNKSY 509
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = -2
Query: 433 REKSESNKKSREFENKEAESSTYR---DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 263
+++ S K++ + E S R ++ + +RKSS +EE E++S + +
Sbjct: 14 KDRDRSKKENGRRDTTEMRSRVKRCDSEEEERIRIRRDRKSSDFEEEEYERDSKRRGEDK 73
Query: 262 GDARL-TTKPNLRRLKRILPEIKRKRKKLTQEILTERTK 149
G R + + LKR +R+++K ++ ER++
Sbjct: 74 GRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSR 112
>At3g09450.1 68416.m01123 hypothetical protein
Length = 775
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -2
Query: 253 RLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE*IKVRAATLGIPRS 74
+L + L RL + EI R T ++L R LSA N L+ IK+ + R
Sbjct: 184 KLYAENALERLNMFV-EIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERP 242
Query: 73 QTNLAEK 53
T +
Sbjct: 243 DTRFLSR 249
>At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 566
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -2
Query: 460 GSKSGVTVEREKSESNK--KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 302
G G E + E +K +S F N AE T++D + V R G DE+
Sbjct: 85 GWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDED 139
>At2g35210.1 68415.m04319 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 395
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 421 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 257
E+++ ++F N ++ SS N + ++ E KSS K S SS F DGD
Sbjct: 294 ETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGD 348
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 219 FNLLRFGLVVSRASPSLKDLL 281
+NL RFG+ ++ +P LK++L
Sbjct: 385 YNLTRFGITLNELTPDLKEML 405
>At1g76770.1 68414.m08934 heat shock protein-related contains
similarity to 17.9 kDa heat-shock protein [Helianthus
annuus] gi|11990130|emb|CAB55634
Length = 244
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -2
Query: 454 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 275
K+ E E+ + E EN+EAE ++ V G+ R GK EE E K
Sbjct: 154 KTEEKTEPEEEIKEETKPEEENEEAEEPQREEEEEVVEEGT-RDHEGKKEEEIEDKPRKK 212
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = -2
Query: 502 GTNKSSETKTGKRD--GSKSGVTV--EREKSESNKKSREFENKEAESSTYRDKNRSVNS- 338
GT+K E + + D G G+ + E + E + E E+KE E S + +
Sbjct: 4515 GTDKKEEEEKEQDDVLGKNKGIEMSDEFDGKEYSVSEDEEEDKEDEGSEDEPLDNGIGDV 4574
Query: 337 GSERKSS-----GKDEEYSEQNSSNKS 272
GS+ + + KDEE E+N + K+
Sbjct: 4575 GSDAEKADEKPWNKDEEDEEENMNEKN 4601
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -2
Query: 484 ETKTGKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 305
E K +R K + E+E+ K + NKE E + R + + SE++ +++
Sbjct: 262 EKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETESRKRIKKQQDESEKEQKRREK 321
Query: 304 EYSE 293
E +E
Sbjct: 322 EQAE 325
>At1g63420.1 68414.m07172 expressed protein
Length = 578
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 418 SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 281
S KKS E + S++ ++NRS S S SG ++ +E N S
Sbjct: 125 SEKKSPEETGSSVDCSSFLNQNRS-GSCSRTLQSGYNQNQTESNRS 169
>At1g22882.1 68414.m02857 expressed protein
Length = 660
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = -2
Query: 430 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 272
+KSE N + + + + + +++ +G+ + D E+ EQN NK+
Sbjct: 154 KKSEINNTGTWNDTEGKDDNNFLKQSQLNKTGTGNDTESSDNEFLEQNQMNKT 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,377,426
Number of Sequences: 28952
Number of extensions: 171227
Number of successful extensions: 1669
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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