Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0502.Seq
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   0.68 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   3.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   6.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   8.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.3  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 64  LTDKAHEFANNKYVGFFHKNNXXSLMIEISTLFTISV 174
           + D   +F  ++YVG++H      L+ ++  +  I V
Sbjct: 15  IADIYRQFPTDRYVGYYHFMTPTLLLRDVELIKQIGV 51


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 2   FHCVLIINISTSHNCRAVYI 61
           F+C LII +   + CRA  I
Sbjct: 288 FYCALIILLCIYYFCRAFII 307


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 289 GSSRYYSPAFKSK 251
           GSSR + PA KSK
Sbjct: 245 GSSRSHQPATKSK 257


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +2

Query: 173 LIRRTKVPRVTDVHVRCXKKDXSIRIFTFKRWG 271
           + +  K P +TD+  R  ++   + +  F  WG
Sbjct: 13  IAKSEKEPSLTDLVQRWLERTPGLELEGFNFWG 45


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +2

Query: 173 LIRRTKVPRVTDVHVRCXKKDXSIRIFTFKRWG 271
           + +  K P +TD+  R  ++   + +  F  WG
Sbjct: 173 IAKSEKEPSLTDLVQRWLERTPGLELEGFNFWG 205


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +2

Query: 173 LIRRTKVPRVTDVHVRCXKKDXSIRIFTFKRWG 271
           + +  K P +TD+  R  ++   + +  F  WG
Sbjct: 173 IAKSEKEPSLTDLVQRWLERTPGLELEGFNFWG 205


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 79  HEFANNKYV 105
           HEFA N+Y+
Sbjct: 245 HEFAENRYL 253


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 117 VKKTHVFIVRKFVGLIC*IMYTARQLCEVEMLIIKTQ*N 1
           +K   + +V  FV ++C   Y    L +V   I KTQ N
Sbjct: 282 IKTVKMTLVIVFVFVLCWSPYIVFDLLQVYGHIPKTQTN 320


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 199 GHRCTC 216
           GH+CTC
Sbjct: 359 GHKCTC 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,108
Number of Sequences: 336
Number of extensions: 1305
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)