Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0502.Seq
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022396-1|AAY54812.1|  319|Drosophila melanogaster IP11552p pro...    31   0.40 
AE013599-1781|AAF58325.1|  319|Drosophila melanogaster CG6553-PA...    31   0.40 
BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p pro...    27   4.9  
BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p pro...    27   4.9  
AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-P...    27   4.9  
AF181626-1|AAD55412.1| 1429|Drosophila melanogaster BcDNA.GH0369...    27   6.5  
AE014296-3657|AAF51813.1| 1429|Drosophila melanogaster CG9063-PA...    27   6.5  

>BT022396-1|AAY54812.1|  319|Drosophila melanogaster IP11552p
           protein.
          Length = 319

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 115 HKNNXXSLMIEISTLFTISVDSKNKSSQGHRC 210
           H+N    L+I +S   TI + S+N +S GHRC
Sbjct: 5   HQNLSIQLVIFLSLAVTICLGSQNATSCGHRC 36


>AE013599-1781|AAF58325.1|  319|Drosophila melanogaster CG6553-PA
           protein.
          Length = 319

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 115 HKNNXXSLMIEISTLFTISVDSKNKSSQGHRC 210
           H+N    L+I +S   TI + S+N +S GHRC
Sbjct: 5   HQNLSIQLVIFLSLAVTICLGSQNATSCGHRC 36


>BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p
           protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 61  YLTDKAHEFANNKYVGFFHKNNXXSLMIEISTLFTISV 174
           Y T+  +EFA N +  F  +    S  + IST+F+I +
Sbjct: 97  YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPI 134


>BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p
           protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 61  YLTDKAHEFANNKYVGFFHKNNXXSLMIEISTLFTISV 174
           Y T+  +EFA N +  F  +    S  + IST+F+I +
Sbjct: 73  YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPI 110


>AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-PB
           protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 61  YLTDKAHEFANNKYVGFFHKNNXXSLMIEISTLFTISV 174
           Y T+  +EFA N +  F  +    S  + IST+F+I +
Sbjct: 102 YFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPI 139


>AF181626-1|AAD55412.1| 1429|Drosophila melanogaster BcDNA.GH03694
            protein.
          Length = 1429

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 279  DIIPQRLKVKILIXXSFFXHRTCTSVTLGTFVL 181
            DI+PQ+L +K+      F    CT   L   +L
Sbjct: 1229 DILPQKLSIKLRYLLQLFIEANCTDYALVLSIL 1261


>AE014296-3657|AAF51813.1| 1429|Drosophila melanogaster CG9063-PA
            protein.
          Length = 1429

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 279  DIIPQRLKVKILIXXSFFXHRTCTSVTLGTFVL 181
            DI+PQ+L +K+      F    CT   L   +L
Sbjct: 1229 DILPQKLSIKLRYLLQLFIEANCTDYALVLSIL 1261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,856
Number of Sequences: 53049
Number of extensions: 203899
Number of successful extensions: 295
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)