BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0502.Seq (349 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 4.2 AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 4.2 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.5 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 7.3 AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 7.3 >AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. Length = 136 Score = 21.0 bits (42), Expect = 4.2 Identities = 6/8 (75%), Positives = 8/8 (100%) Frame = -1 Query: 121 FCEKNPRI 98 FCEKNP++ Sbjct: 86 FCEKNPKL 93 >AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. Length = 135 Score = 21.0 bits (42), Expect = 4.2 Identities = 6/8 (75%), Positives = 8/8 (100%) Frame = -1 Query: 121 FCEKNPRI 98 FCEKNP++ Sbjct: 87 FCEKNPKL 94 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 20.6 bits (41), Expect = 5.5 Identities = 6/11 (54%), Positives = 9/11 (81%) Frame = +2 Query: 245 RIFTFKRWGII 277 R F+F +WGI+ Sbjct: 505 RFFSFHQWGIL 515 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 20.2 bits (40), Expect = 7.3 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -1 Query: 70 LLNNVYST 47 LLNNVYST Sbjct: 404 LLNNVYST 411 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 20.2 bits (40), Expect = 7.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 Query: 280 RYYSPAFKSKDSYR 239 R Y PAF+ K S R Sbjct: 415 RRYQPAFRCKPSQR 428 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,896 Number of Sequences: 438 Number of extensions: 1775 Number of successful extensions: 5 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 7936320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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