Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0501.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.0  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 281 GGRSLANADDLAAVWXLLSGPNTVESVEH 195
           GG  LAN  +    W LL G + V  +++
Sbjct: 275 GGNQLANLANWGPEWNLLDGLDAVAFIDN 303


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 281 GGRSLANADDLAAVWXLLSGPNTVESVEH 195
           GG  LAN  +    W LL G + V  +++
Sbjct: 276 GGNQLANLANWGPEWNLLDGLDAVAFIDN 304


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 281 GGRSLANADDLAAVWXLLSGPNTVESVEH 195
           GG  LAN  +    W LL G + V  +++
Sbjct: 276 GGNQLANLANWGPEWNLLDGLDAVAFIDN 304


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 160 FIVFFH*YNFLYRIWYFRRGLFFHVVIY 77
           FI+F     FL  I+YF   LFF + IY
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIY 147


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 379 VGLLVDYCYCL 347
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 379 VGLLVDYCYCL 347
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 379 VGLLVDYCYCL 347
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 136 NFLYRIWYFRRGLFFHV 86
           N LY+++ FRR ++  +
Sbjct: 102 NALYQVFVFRRSIYLQI 118


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 302 QLTYLKTKLLSNLPTQAITIINQ 370
           +LT+  +  + N P+ AI I+N+
Sbjct: 21  KLTHALSSSVQNFPSDAIKILNR 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,392
Number of Sequences: 336
Number of extensions: 2587
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)