Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0501.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.4  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   2.5  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   2.5  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   2.5  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.5  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   9.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.9  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 59  SESSTQINHNMEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLD 223
           S SS   + + EE++      + ++     K+ E   NR  R DLNA   +QY +
Sbjct: 381 SSSSDSSSSSSEEEAENFKISTAEQYKKQAKEVERRGNRNRR-DLNAFKEKQYYE 434


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 152 LFPLI*FSLPNLVFSSWIVLPCCDLSVL 69
           LF ++  +L +++F SW++L C  L  L
Sbjct: 205 LFSMVQSNLADVMFCSWLLLACEQLQHL 232


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 152 LFPLI*FSLPNLVFSSWIVLPCCDLSVL 69
           LF ++  +L +++F SW++L C  L  L
Sbjct: 58  LFSMVQSNLADVMFCSWLLLACEQLQHL 85


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 152 LFPLI*FSLPNLVFSSWIVLPCCDLSVL 69
           LF ++  +L +++F SW++L C  L  L
Sbjct: 205 LFSMVQSNLADVMFCSWLLLACEQLQHL 232


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 59  SESSTQINHNMEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLD 223
           S SS   + + EE++        ++     K+ E   NR  R DLNA   +QY +
Sbjct: 381 SSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERRGNRNRR-DLNAFKEKQYYE 434


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 77  INHNMEEQSTTKIPDSVKKIILMEKDNEA 163
           + HN  E+S   +  S +K  L  KD++A
Sbjct: 58  VKHNSTEKSQKSVSSSDEKPTLWLKDHDA 86


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 53  PMSESSTQINHNMEEQSTTKIPDSV-KKIILMEKDNEANANRKSRIDLNALPTRQYLDQT 229
           P+  SS+   ++ ++ +   +P +  ++   +++ N    NR  +++      RQ++  T
Sbjct: 72  PIVSSSSGSGNSSKKYAYCGLPYATPQQSASVQRRNARERNRVKQVNNGFANLRQHIPST 131

Query: 230 VVPILLQG 253
           VV  L  G
Sbjct: 132 VVTALTNG 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,342
Number of Sequences: 2352
Number of extensions: 9967
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)