Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0500.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125051-1|AAI25052.1|  320|Homo sapiens N-acetylneuraminate pyr...    32   0.81 
AY336748-1|AAQ82432.1|  301|Homo sapiens N-acetylneuraminate pyr...    32   0.81 
AL513344-1|CAI16502.1|  320|Homo sapiens N-acetylneuraminate pyr...    32   0.81 
AL355999-2|CAH71702.1|  320|Homo sapiens N-acetylneuraminate pyr...    32   0.81 
AF338436-1|AAK25795.1|  320|Homo sapiens C1orf13 protein.              32   0.81 
AK095436-1|BAC04549.1|  159|Homo sapiens protein ( Homo sapiens ...    29   4.3  

>BC125051-1|AAI25052.1|  320|Homo sapiens N-acetylneuraminate
           pyruvate lyase (dihydrodipicolinate synthase) protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 DDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQE 92
           D + A+  Q  +    N ++  G  +   KA   +V+G   G PR PLQ  S+E
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291


>AY336748-1|AAQ82432.1|  301|Homo sapiens N-acetylneuraminate
           pyruvate lyase-like protein protein.
          Length = 301

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 DDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQE 92
           D + A+  Q  +    N ++  G  +   KA   +V+G   G PR PLQ  S+E
Sbjct: 219 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 272


>AL513344-1|CAI16502.1|  320|Homo sapiens N-acetylneuraminate
           pyruvate lyase (dihydrodipicolinate synthase) protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 DDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQE 92
           D + A+  Q  +    N ++  G  +   KA   +V+G   G PR PLQ  S+E
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291


>AL355999-2|CAH71702.1|  320|Homo sapiens N-acetylneuraminate
           pyruvate lyase (dihydrodipicolinate synthase) protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 DDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQE 92
           D + A+  Q  +    N ++  G  +   KA   +V+G   G PR PLQ  S+E
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291


>AF338436-1|AAK25795.1|  320|Homo sapiens C1orf13 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 DDTAAIEAQQKLSHLTNKIIAKGGVIPGLKAAAEIVTGYKFGDPRQPLQPVSQE 92
           D + A+  Q  +    N ++  G  +   KA   +V+G   G PR PLQ  S+E
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291


>AK095436-1|BAC04549.1|  159|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38117 fis, clone D3OST2003797. ).
          Length = 159

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  LSSWETGCRGCLGSPN 134
           LS+W   C GC GSPN
Sbjct: 73  LSTWANSCGGCTGSPN 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,281,252
Number of Sequences: 237096
Number of extensions: 1080934
Number of successful extensions: 6704
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6704
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)