Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0499.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03559-1|AAC13746.1|  147|Drosophila melanogaster mago nashi pro...   118   4e-27
AY071060-1|AAL48682.1|  147|Drosophila melanogaster RE14116p pro...   118   4e-27
AE013599-3136|AAF46677.1|  147|Drosophila melanogaster CG9401-PA...   118   4e-27

>U03559-1|AAC13746.1|  147|Drosophila melanogaster mago nashi
           protein protein.
          Length = 147

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/70 (80%), Positives = 59/70 (84%)
 Frame = +3

Query: 255 GKLRYANNSNYKNDTMIRKEAYVHPCVMDELKRIIIDSEIMHEXXRLWPQPDRVGWXELE 434
           GKLRYANNSNYKNDTMIRKEA+VH  VM+ELKRIIIDSEIM E    WP PDRVG  ELE
Sbjct: 31  GKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELE 90

Query: 435 IVIGEEHIXF 464
           IVIG+EHI F
Sbjct: 91  IVIGDEHISF 100



 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +1

Query: 169 MST-DFYIRYYVGHXGKFGHEFLEFEFRPEG 258
           MST DFY+RYYVGH GKFGHEFLEFEFRP+G
Sbjct: 1   MSTEDFYLRYYVGHKGKFGHEFLEFEFRPDG 31


>AY071060-1|AAL48682.1|  147|Drosophila melanogaster RE14116p
           protein.
          Length = 147

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/70 (80%), Positives = 59/70 (84%)
 Frame = +3

Query: 255 GKLRYANNSNYKNDTMIRKEAYVHPCVMDELKRIIIDSEIMHEXXRLWPQPDRVGWXELE 434
           GKLRYANNSNYKNDTMIRKEA+VH  VM+ELKRIIIDSEIM E    WP PDRVG  ELE
Sbjct: 31  GKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELE 90

Query: 435 IVIGEEHIXF 464
           IVIG+EHI F
Sbjct: 91  IVIGDEHISF 100



 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +1

Query: 169 MST-DFYIRYYVGHXGKFGHEFLEFEFRPEG 258
           MST DFY+RYYVGH GKFGHEFLEFEFRP+G
Sbjct: 1   MSTEDFYLRYYVGHKGKFGHEFLEFEFRPDG 31


>AE013599-3136|AAF46677.1|  147|Drosophila melanogaster CG9401-PA
           protein.
          Length = 147

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/70 (80%), Positives = 59/70 (84%)
 Frame = +3

Query: 255 GKLRYANNSNYKNDTMIRKEAYVHPCVMDELKRIIIDSEIMHEXXRLWPQPDRVGWXELE 434
           GKLRYANNSNYKNDTMIRKEA+VH  VM+ELKRIIIDSEIM E    WP PDRVG  ELE
Sbjct: 31  GKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELE 90

Query: 435 IVIGEEHIXF 464
           IVIG+EHI F
Sbjct: 91  IVIGDEHISF 100



 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +1

Query: 169 MST-DFYIRYYVGHXGKFGHEFLEFEFRPEG 258
           MST DFY+RYYVGH GKFGHEFLEFEFRP+G
Sbjct: 1   MSTEDFYLRYYVGHKGKFGHEFLEFEFRPDG 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,192,553
Number of Sequences: 53049
Number of extensions: 351302
Number of successful extensions: 624
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)