Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0497.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B; n... 106 2e-22
UniRef50_UPI0000E490DB Cluster: PREDICTED: similar to Psmc6 prot... 106 3e-22
UniRef50_A2YEV9 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_Q4UAE5 Cluster: 26S proteasome ATPase subunit, putative... 60 3e-08
UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;... 37 0.29
UniRef50_Q9CFL3 Cluster: Putative uncharacterized protein yoiA; ... 34 1.5
UniRef50_Q8TI88 Cluster: Proteasome-activating nucleotidase; n=1... 34 2.0
UniRef50_Q9K1Y3 Cluster: Putative uncharacterized protein; n=2; ... 33 2.7
UniRef50_A6Q5M7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_A0CXR3 Cluster: Chromosome undetermined scaffold_30, wh... 33 4.7
UniRef50_A0CQY1 Cluster: Chromosome undetermined scaffold_241, w... 32 6.2
UniRef50_UPI00006CBB39 Cluster: hypothetical protein TTHERM_0056... 32 8.2
UniRef50_A0PY82 Cluster: Exonuclease, putative; n=1; Clostridium... 32 8.2
UniRef50_Q7R4W2 Cluster: GLP_440_4931_3870; n=1; Giardia lamblia... 32 8.2
UniRef50_Q4P4R8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
UniRef50_A5E4B9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
>UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B;
n=129; Eukaryota|Rep: 26S protease regulatory subunit
S10B - Homo sapiens (Human)
Length = 389
Score = 106 bits (255), Expect = 2e-22
Identities = 61/120 (50%), Positives = 70/120 (58%)
Frame = +2
Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG + +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
L K LK ALDM LTIM L EVDPLVYNMSH
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
>UniRef50_UPI0000E490DB Cluster: PREDICTED: similar to Psmc6
protein; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Psmc6 protein - Strongylocentrotus
purpuratus
Length = 501
Score = 106 bits (254), Expect = 3e-22
Identities = 60/120 (50%), Positives = 72/120 (60%)
Frame = +2
Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
REKA QDYRKKL+E KE+++RLKE R+ LK+LTK+YD SENDLKALQSVG + +
Sbjct: 5 REKAIQDYRKKLLEHKELDARLKEMREHLKELTKKYDKSENDLKALQSVGQIVGEVLKQL 64
Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
L K LK+ ALDM LTIM L EVDP+VY+MSH
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRGLDKTKLKQGTRVALDMTTLTIMRYLPREVDPMVYHMSH 124
>UniRef50_A2YEV9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 423
Score = 72.5 bits (170), Expect = 5e-12
Identities = 44/120 (36%), Positives = 58/120 (48%)
Frame = +2
Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
R A DYRKKL+ +E+E+R + RD LK+ K + +E+DLK+LQSVG + +
Sbjct: 13 RRAAATDYRKKLLTCRELEARARTARDNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPL 72
Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
+ K L LDM LTIM L EVDP+VYNM H
Sbjct: 73 DSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPREVDPVVYNMLH 132
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
I+GEVL+ L E+FIVKA++GPRYVVGCR +DK L GT V
Sbjct: 64 IIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRV 106
>UniRef50_Q4UAE5 Cluster: 26S proteasome ATPase subunit, putative;
n=1; Theileria annulata|Rep: 26S proteasome ATPase
subunit, putative - Theileria annulata
Length = 448
Score = 60.1 bits (139), Expect = 3e-08
Identities = 41/126 (32%), Positives = 59/126 (46%)
Frame = +2
Query: 80 STSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX* 259
ST+ ++ RE Y +K+ E +++E +LK+ R + +L K+ E DLKALQS+G
Sbjct: 12 STNVLDENRE-VINQYIRKVKEHRDLEQKLKQLRIDMIELNKKDMKIEEDLKALQSIGQI 70
Query: 260 LXKS*NSSQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVD 439
+ N+ LK ALDM LTIM L EVD
Sbjct: 71 VGNVLRKIDDNKYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLTIMKILPREVD 130
Query: 440 PLVYNM 457
P++YNM
Sbjct: 131 PIIYNM 136
Score = 53.2 bits (122), Expect = 3e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
IVG VL+++ + K+IVKA++GPRYVV C+ +D +LK GT V
Sbjct: 70 IVGNVLRKIDDNKYIVKASSGPRYVVCCKVNIDVNLLKSGTRV 112
>UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;
Guillardia theta|Rep: 26S proteasome AAA-ATPase subunit
- Guillardia theta (Cryptomonas phi)
Length = 395
Score = 36.7 bits (81), Expect = 0.29
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
+VG+++K++ + +FIVKA G Y+V C ++ +L V
Sbjct: 60 LVGDLIKKIGKNRFIVKAPTGTNYIVSCENRINCDILNNNDRV 102
>UniRef50_Q9CFL3 Cluster: Putative uncharacterized protein yoiA;
n=1; Lactococcus lactis subsp. lactis|Rep: Putative
uncharacterized protein yoiA - Lactococcus lactis subsp.
lactis (Streptococcus lactis)
Length = 1090
Score = 34.3 bits (75), Expect = 1.5
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +2
Query: 119 QDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQ 244
QDY ++++ +EV+ + ++ +++TK+Y+ ND KA Q
Sbjct: 116 QDYNSEMIKYEEVKKKYEQSLKEYQEITKEYENVINDRKAAQ 157
>UniRef50_Q8TI88 Cluster: Proteasome-activating nucleotidase; n=14;
Archaea|Rep: Proteasome-activating nucleotidase -
Methanosarcina acetivorans
Length = 421
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
I+G V+ + ++ IV+++NGP+++V + +D+ L G V
Sbjct: 82 IIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKV 124
>UniRef50_Q9K1Y3 Cluster: Putative uncharacterized protein; n=2;
Chlamydophila pneumoniae|Rep: Putative uncharacterized
protein - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 243
Score = 33.5 bits (73), Expect = 2.7
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDL 232
E+A+++Y+K+ E +ES + R+ L++ KQ++ DL
Sbjct: 68 ERAYKEYQKRFQEPSRLESEVSGCREHLREQVKQFETQGLDL 109
>UniRef50_A6Q5M7 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 662
Score = 33.1 bits (72), Expect = 3.6
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 119 QDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQS 247
++Y+KK +E +++E L + LKDL K+ + N +K +++
Sbjct: 220 EEYKKKQVELEKIEKDLSSENEILKDLEKERNLLNNKIKHIKN 262
>UniRef50_A0CXR3 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1104
Score = 32.7 bits (71), Expect = 4.7
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 92 MEPLREKAFQ---DYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQ 244
++ L+EK+ Q + + KL E + +E +E D L++L KQ SEN LK LQ
Sbjct: 390 LDQLKEKSNQKINELKNKLKEAQNIEQYQQEQLDELQELIKQ---SENQLKQLQ 440
>UniRef50_A0CQY1 Cluster: Chromosome undetermined scaffold_241,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_241,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 924
Score = 32.3 bits (70), Expect = 6.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 110 KAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLK 235
K QD K+L E KE ++++ KDLTKQ N+L+
Sbjct: 736 KQLQDLTKQLQESKEANQKIEDNN---KDLTKQLQNKSNELQ 774
>UniRef50_UPI00006CBB39 Cluster: hypothetical protein
TTHERM_00564060; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00564060 - Tetrahymena
thermophila SB210
Length = 727
Score = 31.9 bits (69), Expect = 8.2
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 86 SDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSEND-LKALQSV 250
+D EP +++F D+ +K KE++S +E R KDL+K+ D + + L L+S+
Sbjct: 358 ADSEPPIQQSFLDFCQKY---KEIQSNNEEERSYYKDLSKKLDELQREKLMQLESL 410
>UniRef50_A0PY82 Cluster: Exonuclease, putative; n=1; Clostridium
novyi NT|Rep: Exonuclease, putative - Clostridium novyi
(strain NT)
Length = 1176
Score = 31.9 bits (69), Expect = 8.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 122 DYRKKLMEXKEVESRLKEGRDXLKDLTKQYD 214
DY+K L KE+ ++L+E LK+++K+Y+
Sbjct: 432 DYKKSLNNKKELNNKLQEKEKNLKEVSKEYN 462
>UniRef50_Q7R4W2 Cluster: GLP_440_4931_3870; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_4931_3870 - Giardia lamblia ATCC
50803
Length = 353
Score = 31.9 bits (69), Expect = 8.2
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 MPASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSENDLKAL 241
M ++E +EKA DYRK L K VE+ RD L DLT++++ + DL L
Sbjct: 142 MDEKIKEIEKSKEKALHDYRKHL---KSVET----DRDYLINDLTRRFEKANQDLSYL 192
>UniRef50_Q4P4R8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1812
Score = 31.9 bits (69), Expect = 8.2
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +2
Query: 53 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEXKEV----ESRLKEGRDXLKDLTKQYDXS 220
Q ++ + A+T+D+E + F+ R + E ++ ++ + + L DL + D S
Sbjct: 826 QTQIRAIHAATADVEERMHRQFEQSRSRDHEKEDALVNAKAEMVASQRALVDLQSRLDAS 885
Query: 221 ENDLKALQS 247
+N++KALQ+
Sbjct: 886 QNEIKALQA 894
>UniRef50_A5E4B9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1531
Score = 31.9 bits (69), Expect = 8.2
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 101 LREKAFQDYRKKLMEXK--EVESRLKEGRDXLKDLTKQYDXSENDLK 235
L EK + KKL+E K E+E LKE ++ L K++D + DLK
Sbjct: 1115 LSEKEKEVDSKKLLEAKILELEGELKEAKNEALTLKKEHDKTIEDLK 1161
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,267,136
Number of Sequences: 1657284
Number of extensions: 5612204
Number of successful extensions: 12684
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12673
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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