Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0497.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D78275-1|BAA11338.1|  389|Homo sapiens proteasome subunit p42 pr...   106   4e-23
CR456709-1|CAG32990.1|  389|Homo sapiens PSMC6 protein.               106   4e-23
BT006843-1|AAP35489.1|  389|Homo sapiens proteasome (prosome, ma...   106   4e-23
BC005390-1|AAH05390.1|  389|Homo sapiens proteasome (prosome, ma...   106   4e-23
AF006305-1|AAB61616.1|  389|Homo sapiens 26S proteasome regulato...   106   4e-23

>D78275-1|BAA11338.1|  389|Homo sapiens proteasome subunit p42
           protein.
          Length = 389

 Score =  106 bits (255), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 70/120 (58%)
 Frame = +2

Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
           R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG  + +     
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
                                 L K  LK     ALDM  LTIM  L  EVDPLVYNMSH
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124


>CR456709-1|CAG32990.1|  389|Homo sapiens PSMC6 protein.
          Length = 389

 Score =  106 bits (255), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 70/120 (58%)
 Frame = +2

Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
           R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG  + +     
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
                                 L K  LK     ALDM  LTIM  L  EVDPLVYNMSH
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124


>BT006843-1|AAP35489.1|  389|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, ATPase, 6 protein.
          Length = 389

 Score =  106 bits (255), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 70/120 (58%)
 Frame = +2

Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
           R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG  + +     
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
                                 L K  LK     ALDM  LTIM  L  EVDPLVYNMSH
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124


>BC005390-1|AAH05390.1|  389|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, ATPase, 6 protein.
          Length = 389

 Score =  106 bits (255), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 70/120 (58%)
 Frame = +2

Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
           R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG  + +     
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
                                 L K  LK     ALDM  LTIM  L  EVDPLVYNMSH
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124


>AF006305-1|AAB61616.1|  389|Homo sapiens 26S proteasome regulatory
           subunit protein.
          Length = 389

 Score =  106 bits (255), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 70/120 (58%)
 Frame = +2

Query: 104 REKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NSS 283
           R+KA QDYRKKL+E KE++ RLKE R+ LK+LTKQY+ SENDLKALQSVG  + +     
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 284 QXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMSH 463
                                 L K  LK     ALDM  LTIM  L  EVDPLVYNMSH
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,945,289
Number of Sequences: 237096
Number of extensions: 845568
Number of successful extensions: 1680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)