Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0497.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071182-1|AAL48804.1| 397|Drosophila melanogaster RE23388p pro... 105 4e-23
AF145310-1|AAF08391.1| 390|Drosophila melanogaster 26S proteaso... 105 4e-23
AE014298-869|AAF46146.2| 390|Drosophila melanogaster CG3455-PA ... 105 4e-23
AY089267-1|AAL90005.1| 398|Drosophila melanogaster AT06668p pro... 81 6e-16
AE014296-2061|AAF49987.1| 398|Drosophila melanogaster CG7257-PA... 81 6e-16
BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p pro... 29 3.5
BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p pro... 29 3.5
AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p pro... 29 3.5
AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB, ... 29 3.5
AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA, ... 29 3.5
BT003639-1|AAO39643.1| 916|Drosophila melanogaster AT16639p pro... 28 6.1
AE014298-1320|AAF46481.2| 916|Drosophila melanogaster CG32703-P... 28 6.1
BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p pro... 28 8.1
AY075246-1|AAL68113.1| 367|Drosophila melanogaster AT20903p pro... 28 8.1
AY058318-1|AAL13547.1| 872|Drosophila melanogaster GH08353p pro... 28 8.1
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 28 8.1
AE014296-3271|AAF49077.2| 872|Drosophila melanogaster CG14183-P... 28 8.1
AE013599-3550|AAF46961.1| 367|Drosophila melanogaster CG13544-P... 28 8.1
>AY071182-1|AAL48804.1| 397|Drosophila melanogaster RE23388p
protein.
Length = 397
Score = 105 bits (251), Expect = 4e-23
Identities = 61/121 (50%), Positives = 68/121 (56%)
Frame = +2
Query: 101 LREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NS 280
LR KA +YRKKL+E KE+E RLKE R+ +KDLTK YD SENDLKALQSVG + +
Sbjct: 12 LRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 71
Query: 281 SQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMS 460
L K LK ALDM LTIM L EVDPLVYNMS
Sbjct: 72 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 131
Query: 461 H 463
H
Sbjct: 132 H 132
>AF145310-1|AAF08391.1| 390|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p42D protein.
Length = 390
Score = 105 bits (251), Expect = 4e-23
Identities = 61/121 (50%), Positives = 68/121 (56%)
Frame = +2
Query: 101 LREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NS 280
LR KA +YRKKL+E KE+E RLKE R+ +KDLTK YD SENDLKALQSVG + +
Sbjct: 5 LRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 64
Query: 281 SQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMS 460
L K LK ALDM LTIM L EVDPLVYNMS
Sbjct: 65 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 124
Query: 461 H 463
H
Sbjct: 125 H 125
>AE014298-869|AAF46146.2| 390|Drosophila melanogaster CG3455-PA
protein.
Length = 390
Score = 105 bits (251), Expect = 4e-23
Identities = 61/121 (50%), Positives = 68/121 (56%)
Frame = +2
Query: 101 LREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVGX*LXKS*NS 280
LR KA +YRKKL+E KE+E RLKE R+ +KDLTK YD SENDLKALQSVG + +
Sbjct: 5 LRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 64
Query: 281 SQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXEVDPLVYNMS 460
L K LK ALDM LTIM L EVDPLVYNMS
Sbjct: 65 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 124
Query: 461 H 463
H
Sbjct: 125 H 125
>AY089267-1|AAL90005.1| 398|Drosophila melanogaster AT06668p
protein.
Length = 398
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/130 (37%), Positives = 66/130 (50%)
Frame = +2
Query: 74 PASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVG 253
P + + R +A +YR KL+E +E+ES+LK RD K + +Y+ SE+DLKALQSVG
Sbjct: 4 PLANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVG 63
Query: 254 X*LXKS*NSSQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXE 433
+ + + K LK ALD+ LTIM L E
Sbjct: 64 QMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPRE 123
Query: 434 VDPLVYNMSH 463
VDPLVYNM+H
Sbjct: 124 VDPLVYNMTH 133
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
+VGE+LKQLT + FIVKA+NGPRYVVGCRR ++K LK GT V
Sbjct: 65 MVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRV 107
>AE014296-2061|AAF49987.1| 398|Drosophila melanogaster CG7257-PA
protein.
Length = 398
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/130 (37%), Positives = 66/130 (50%)
Frame = +2
Query: 74 PASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQSVG 253
P + + R +A +YR KL+E +E+ES+LK RD K + +Y+ SE+DLKALQSVG
Sbjct: 4 PLANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVG 63
Query: 254 X*LXKS*NSSQXXXXXXXXXXXXXXXXXVVGNLTKXCLKEEHXFALDMXXLTIMXXLXXE 433
+ + + K LK ALD+ LTIM L E
Sbjct: 64 QMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPRE 123
Query: 434 VDPLVYNMSH 463
VDPLVYNM+H
Sbjct: 124 VDPLVYNMTH 133
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +1
Query: 256 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRXLDKXMLKGGTXV 384
+VGE+LKQLT + FIVKA+NGPRYVVGCRR ++K LK GT V
Sbjct: 65 MVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRV 107
>BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p
protein.
Length = 1072
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSEND 229
EK Y K+ + +E E ++KE RD L ++L + + +E D
Sbjct: 780 EKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKD 821
>BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p
protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSEND 229
EK Y K+ + +E E ++KE RD L ++L + + +E D
Sbjct: 332 EKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKD 373
>AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p
protein.
Length = 1140
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSEND 229
EK Y K+ + +E E ++KE RD L ++L + + +E D
Sbjct: 848 EKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKD 889
>AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB,
isoform B protein.
Length = 742
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSEND 229
EK Y K+ + +E E ++KE RD L ++L + + +E D
Sbjct: 450 EKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKD 491
>AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA,
isoform A protein.
Length = 1140
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 EKAFQDYRKKLMEXKEVESRLKEGRDXL-KDLTKQYDXSEND 229
EK Y K+ + +E E ++KE RD L ++L + + +E D
Sbjct: 848 EKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKD 889
>BT003639-1|AAO39643.1| 916|Drosophila melanogaster AT16639p
protein.
Length = 916
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 68 TMPASTSDMEPLREKAFQDYRKKLMEXKE-VESRLKEGRDXLKDLTKQ 208
T P+ T + E+A+Q K+ ++ KE R++ + LK+ T+Q
Sbjct: 586 TFPSETEHRQQREERAYQRQMKRELQLKESYRRRIEAESEPLKETTEQ 633
>AE014298-1320|AAF46481.2| 916|Drosophila melanogaster CG32703-PA
protein.
Length = 916
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 68 TMPASTSDMEPLREKAFQDYRKKLMEXKE-VESRLKEGRDXLKDLTKQ 208
T P+ T + E+A+Q K+ ++ KE R++ + LK+ T+Q
Sbjct: 586 TFPSETEHRQQREERAYQRQMKRELQLKESYRRRIEAESEPLKETTEQ 633
>BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p
protein.
Length = 806
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 74 PASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQS 247
P SD L+E+ Q K ++ KEVESR+ E + + L + + LQS
Sbjct: 476 PDLPSDDGALQEEIAQLQEKMTIQQKEVESRIAEQLEEEQRLRENVKYLNEQIATLQS 533
>AY075246-1|AAL68113.1| 367|Drosophila melanogaster AT20903p
protein.
Length = 367
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 324 ARAISSFYNKFFFCELFQDFXNYXPTLCRAFRSFSL 217
AR I + + KF+F + F+D T+ R +R FS+
Sbjct: 61 ARTIQNNWRKFYFRKYFKDLRKAVITIQRWWRGFSV 96
>AY058318-1|AAL13547.1| 872|Drosophila melanogaster GH08353p
protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 53 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKD 196
Q L P S ++++ LR+K ++ RKK + K+++ + + R L+D
Sbjct: 387 QESLGKKPLSKAELKKLRDKEKKEKRKKKEKLKQLKMKEAKRRKKLRD 434
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 74 PASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKDLTKQYDXSENDLKALQS 247
P SD L+E+ Q K ++ KEVESR+ E + + L + + LQS
Sbjct: 477 PDLPSDDGALQEEIAQLQEKMTIQQKEVESRIAEQLEEEQRLRENVKYLNEQIATLQS 534
>AE014296-3271|AAF49077.2| 872|Drosophila melanogaster CG14183-PA
protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 53 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEXKEVESRLKEGRDXLKD 196
Q L P S ++++ LR+K ++ RKK + K+++ + + R L+D
Sbjct: 387 QESLGKKPLSKAELKKLRDKEKKEKRKKKEKLKQLKMKEAKRRKKLRD 434
>AE013599-3550|AAF46961.1| 367|Drosophila melanogaster CG13544-PA
protein.
Length = 367
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 324 ARAISSFYNKFFFCELFQDFXNYXPTLCRAFRSFSL 217
AR I + + KF+F + F+D T+ R +R FS+
Sbjct: 61 ARTIQNNWRKFYFRKYFKDLRKAVITIQRWWRGFSV 96
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,304,992
Number of Sequences: 53049
Number of extensions: 269813
Number of successful extensions: 561
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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