Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0496.Seq
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 31 0.33
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 1.3
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49) 29 1.3
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 29 2.3
SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47) 29 2.3
SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3) 29 2.3
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 29 2.3
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 2.3
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 28 3.1
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 28 4.1
SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 28 4.1
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 28 4.1
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 27 5.4
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 27 5.4
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0) 27 5.4
SB_35839| Best HMM Match : NOA36 (HMM E-Value=2.6) 27 7.2
SB_30892| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023) 27 7.2
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023) 27 7.2
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 27 7.2
SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019) 27 7.2
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22169| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_286| Best HMM Match : M (HMM E-Value=0.39) 27 9.5
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = -1
Query: 242 EKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
+K +K +KT+K ++ PN +R++++ K +KK ASS++ P+
Sbjct: 367 KKGTKRGKKKTSKDATEESEAPNKKRKEKK--KKKKKKKASSKIEPT 411
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 31.1 bits (67), Expect = 0.44
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -1
Query: 260 KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
KS++ K KK K +M+K +K ++ T DPP + R K R + G+ +S S
Sbjct: 1090 KSKK-KSKKDKKSMKKASKHRKETGDPPML-RAKIRGIGSPVSGSFQRTISES 1140
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 30.7 bits (66), Expect = 0.58
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 150
E+ K +E KEK+ + K K K+ + +QR+KER+
Sbjct: 352 EKQKHQEKKEKERQREKEKLEKEKQKELERKELQRQKERM 391
Score = 30.3 bits (65), Expect = 0.77
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
ER K R +EK+ + R+ K K QREKE++ K ++K
Sbjct: 332 EREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQK 377
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 30.3 bits (65), Expect = 0.77
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = -1
Query: 275 SAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRW 96
S ER KSR + +SK+ RKT K + P Q +ER N K+ + S L R
Sbjct: 277 SEERPKSRLYRHSRSKSKERKTLK---SPIRSPRGQSSRER---NTKRKSKSPSLERRR- 329
Query: 95 VNPA*RSRIIQNR 57
+ A RSR I+ R
Sbjct: 330 -SRARRSRSIERR 341
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
ER + +E KEK+ +A K K + D + + EK+R K ++K
Sbjct: 956 ERLREKEEKEKQKEAERAKKEKERLLQEDKLHEKEEKDRKDKEKRK 1001
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 272 AERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTA 123
A+ + E KEK A R + +GK+ Q +K K +KK A
Sbjct: 927 ADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQEDKTDAEKEKKKPKA 976
>SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49)
Length = 384
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 287 KNGISAERTKSREVKEKKSKANMRK-TTKGKRTTADPPNIQREKERVWKNQKKGTASSRL 111
K + ER+K + K+SK N +K T K +R+ + ++ER N +KGT
Sbjct: 274 KGTLKRERSKGNP-QRKRSKGNAQKGTLKRERSKGNAQKGTLKRERSKGNAQKGTLKREC 332
Query: 110 SPSRWVNPA*RSRIIQNR 57
S P R+ +I++R
Sbjct: 333 SKGN--APRNRNLVIKSR 348
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 293 IGKNGISAERTKSREVKEKKSKANMRKTTKGK--RTTADPPNIQREKERVWKNQKKGTAS 120
+ K + E R K + + NMR+ + G ++ AD P QR ++ K+ +KG +
Sbjct: 235 VPKKSLKDENDLQRAPKRRNWRKNMRRPSSGSIGQSMADSP--QRGTPQLSKSDRKGEKT 292
Query: 119 SRLSPSRWVNPA*RSR 72
++ + V PA S+
Sbjct: 293 AKGKEIKRVIPAGESK 308
>SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTAS 120
E TKS++ K +K K K + KRT + + + E R + K + S
Sbjct: 31 EVTKSKKAKREKKKKKKEKRKREKRTRGEMSSYEEEGRRSRRKSHKHSLS 80
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -1
Query: 260 KSREVKEKKSKANMRKTTKGKRTTADPPNIQRE--KERVWKNQKKGTASSRLSPSRWVNP 87
K +E +EKK + +KT + + +P N +++ RV + Q + R +P P
Sbjct: 697 KKKEKREKKERKREKKTRRARTPVEEPENFEKDVPLPRVHEEQDQVEKEHRRTPDGTQEP 756
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 272 AERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLS 108
AE K ++ KEKKSK ++ G R + + ++ + K +++ T + S
Sbjct: 616 AEERKGKKKKEKKSKRPLQPGEGGSRGSDTEEEVVAKRRKKVKEEERVTQPDKTS 670
>SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47)
Length = 690
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 293 IGKNGISAERTKSREVKEKKSKANMRKTTKGKRTT 189
IG N +A ++ K++ +K R TTK RTT
Sbjct: 560 IGDNNATAGYQSTKRAKKRSTKTRKRLTTKQSRTT 594
>SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3)
Length = 104
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -1
Query: 317 RRTHDKFSIG--KNGISAERTKSREVKEKKSKANMRKTTKG--KRTTADPPNIQREKERV 150
+++ D+F G K + + +++V + K+N+RK K +++ P + R ++R
Sbjct: 29 KKSWDQFKEGPIKRLGATTKNMAKKVALDQPKSNIRKIVKKILEQSKRWPESSGRNQKRS 88
Query: 149 WKNQKKG 129
W NQK G
Sbjct: 89 WSNQKDG 95
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 254 REVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKK 132
+E K++K K M+K K K +T + ++EKE+ K +K+
Sbjct: 134 KEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKE 175
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/87 (22%), Positives = 34/87 (39%)
Frame = -1
Query: 311 THDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
+ D + + S T S + K KA + T+G D + R + +
Sbjct: 448 SEDNEDLSSSACSGPATPSGTLTPSKFKAKSKSATEGNLAGQDETSSVRTSSNAADDARI 507
Query: 131 GTASSRLSPSRWVNPA*RSRIIQNRIP 51
T SS ++PS + P R + N +P
Sbjct: 508 STTSSPVTPSGTLTP--RLKAKSNPLP 532
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 266 RTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 114
R S+ KE+ R ++ +R+ ++ P++++ + K+Q+K + SR
Sbjct: 247 RRNSQRHKERSRYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQRKSRSRSR 297
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = -1
Query: 296 SIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 117
S+ +N K + E+K K +R + K+ +P ++ ++E+ Q+K T S
Sbjct: 187 SVSRNNSELSPKKEHKEIEEKHKV-IRVKVESKKQITEPQRLEEKEEK----QRKRTKSR 241
Query: 116 RLSPSRWVNPA*RS 75
+SP++ P +S
Sbjct: 242 GVSPNKEPKPKKKS 255
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = -1
Query: 278 ISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRL 111
I E++K ++++K+ + +RK ++ + Q+EKER + QK+ +L
Sbjct: 949 IEQEKSKQLQLQQKEEEDRLRKKIMKEQRELEKMLQQKEKERQVERQKQKQLQEQL 1004
>SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -1
Query: 266 RTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 135
RT+ + ++E+K + + T+ RT ++ +K+R WK++K
Sbjct: 110 RTERQRMEEQKDREWKNRKTENGRTVRQ--RMEEQKDREWKDRK 151
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1
Query: 272 AERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWV 93
A + R KEK SK + +GK T PP++ ++ + Q T +S PS
Sbjct: 3168 AASKRKRNTKEKNSKLPLPSVPEGKILTDIPPSLPSTASQIGE-QVVNTRTSSNEPSLPE 3226
Query: 92 NPA 84
PA
Sbjct: 3227 APA 3229
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 IGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 114
+ N + + +R++ + N++ + PN +E V+K+ KG SS
Sbjct: 969 VAVNNVLTSQNHARDMLNNNN-INLKNADNASLLRSLSPNGTIGQEPVFKSSSKGDLSSE 1027
Query: 113 LSPS 102
LSPS
Sbjct: 1028 LSPS 1031
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN 141
E + +E KEK+ + +K+ K K A P + K+ W N
Sbjct: 271 EEWEEQERKEKERQERKQKSIKEKEVIAWPWKVGHSKDEPWHN 313
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPP--NIQREKERVWKNQKKGTASSRLSPS 102
E K++E KE S K + ++D NI+ EKER + +Q+ G R S
Sbjct: 1249 ETDKTKERKEVSSDQETGKIKGQEEVSSDQETGNIKGEKERFFSDQETGKIKGRKDSS 1306
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
E K +E +EKK++ + + +G+R ++E+ER + +KK
Sbjct: 503 EERKHKEEEEKKTEESYDDSWRGRRARRKAEEERKERERRERLEKK 548
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 311 THDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREK 159
T D+ K+ E ++SRE + KKS + K R P + EK
Sbjct: 334 TRDEGKPKKSAAKKEHSRSREERRKKSIEKRKSQEKMNRRAKPAPGLHCEK 384
>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
Length = 584
Score = 27.5 bits (58), Expect = 5.4
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Frame = -1
Query: 434 DRNEYEXRGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN---GISAER 264
D N + E +D SD DK S K G +
Sbjct: 409 DSNSEDSEEGEESDDEGSDDEDMEVSEGEKKSKKKSANAENGGDKASKAKKEKKGDDDKE 468
Query: 263 TKSREVKEKKS--KANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 114
KS++ K+ K+ K + +KT KGK+ + + EK K KK T + +
Sbjct: 469 AKSKKEKKTKNGGKVDGKKTKKGKK--KEESEEEEEKSEEEKKSKKKTKTKK 518
>SB_35839| Best HMM Match : NOA36 (HMM E-Value=2.6)
Length = 437
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -1
Query: 290 GKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKG 129
G+ G+ A + ++ + K K + + KR + QR +R W NQK G
Sbjct: 43 GQKGLGATKKMAKRIS-KLPKMAKKVLEQPKRWPKGSRSYQRWPKRSWSNQKDG 95
>SB_30892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/63 (23%), Positives = 36/63 (57%)
Frame = -1
Query: 317 RRTHDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 138
R+T + ++ +NG RT+ ++++ + + + T+ RT + ++ +K+R WK++
Sbjct: 127 RKTENGRTVRQNG----RTERQKMEGRSDREWLDSQTENGRT--ERQKMEGQKDREWKDR 180
Query: 137 KKG 129
K G
Sbjct: 181 KTG 183
>SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
Length = 186
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 290 GKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTAS 120
GK + K + K+ KSK+ K +K + P + ++ K R + K TAS
Sbjct: 114 GKRSVRKSSVK-KLTKKSKSKSRKSKASKKRNARRRPRSARKTKSRAPARRVKRTAS 169
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTAD 183
E T+ + +EKK K +K KGK T D
Sbjct: 525 EATEEDDGEEKKEKKKKKKKKKGKEKTGD 553
>SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
Length = 186
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 290 GKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTAS 120
GK + K + K+ KSK+ K +K + P + ++ K R + K TAS
Sbjct: 114 GKRSVRKSSVK-KLTKKSKSKSRKSKASKKRNARRRPRSARKTKSRAPARRVKRTAS 169
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -1
Query: 302 KFSIGKNGISAERTKSREV--KEKKSKANMRKTTKGKRTTADPPNIQREKERVW--KNQK 135
KF K + E RE KEK K + + TT DPP + K + W K+ K
Sbjct: 356 KFRRSKKASATEENDEREQENKEKNKVEEEEKKSDNEETTPDPPKSRFGKFK-WARKDDK 414
Query: 134 KGTASS 117
K S
Sbjct: 415 KDEGDS 420
>SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)
Length = 1097
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 293 WRTCRGSYVLHTFPLHRIFRIRNLCCMSR 379
+R C +V+ T P H F ++ L C R
Sbjct: 513 YRPCHADFVMQTSPCHTDFVMQTLSCRPR 541
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 317 RRTHDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 138
RR + + + G + E K R K+KK K K + A+ +REKE +++
Sbjct: 169 RRAKEIWEKNETGETKEERKKRH-KDKKKKREESKERRRHSDKAEKSERKREKEEKKRDK 227
Query: 137 KKGTASSR 114
+ SR
Sbjct: 228 SEKRERSR 235
>SB_22169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 317 RRTHDKFSIGKNGISAERTKSRE-VKEKKSKANMRKTTKGKRTTADPPNIQREKERVW 147
R D F++GK + +++KS+E + + + ++ K +K K+ + P + E + W
Sbjct: 119 RAADDSFTVGK--LIMQQSKSKEHIPKSDASSSSCKESKSKKDSKSSPTHKAEPKLDW 174
>SB_286| Best HMM Match : M (HMM E-Value=0.39)
Length = 414
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 287 KNGISAERTKSREVKEKKSKANMRKTT-KGKRTTADPPNIQREKERVWKNQKKGT 126
K + +ER+K +K + SK N +K T K +R+ + ++ER N +KGT
Sbjct: 37 KETLKSERSKET-LKRECSKGNAQKRTLKRERSKGNAQKGTLKRERSKGNTQKGT 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,511,052
Number of Sequences: 59808
Number of extensions: 115608
Number of successful extensions: 704
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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