Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0496.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.2  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    24   2.2  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   2.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   2.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.2  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   6.6  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    22   8.7  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = -1

Query: 287 KNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN--QKKGTASSR 114
           +NG   +     ++KE  S   M + +     T DP  I R       N  Q++ +  S 
Sbjct: 661 QNGSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDSN 720

Query: 113 LSPSRWVNP 87
           LS  R  +P
Sbjct: 721 LSSDRETSP 729


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = -1

Query: 287 KNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN--QKKGTASSR 114
           +NG   +     ++KE  S   M + +     T DP  I R       N  Q++ +  S 
Sbjct: 661 QNGSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDSN 720

Query: 113 LSPSRWVNP 87
           LS  R  +P
Sbjct: 721 LSSDRETSP 729


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 305 DKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQ 168
           D  S G  GI     K+ E K++K +A +RK    K +   P N++
Sbjct: 326 DTTSSGSTGILYCLAKNPE-KQEKLRAELRKIMPNKDSPLTPDNMK 370


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 15/54 (27%), Positives = 19/54 (35%)
 Frame = -1

Query: 317 RRTHDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 156
           R   D +   K  ++    K  EVK K S  N          T D P+    KE
Sbjct: 751 RLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTARALCANKTPDKPDFPYRKE 804


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 364  KVPNTKNTVKRKSMKNVGPTT 302
            K PNT   + ++S+KN  P T
Sbjct: 1699 KAPNTATDIMQRSLKNKCPNT 1719


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -1

Query: 290 GKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKG 129
           G +     R+ ++++  +K ++    +TKG+ T A  PNI       W ++K G
Sbjct: 829 GVSNAGLSRSSAKQLSMRKWQSEWDCSTKGRTTHALIPNI-----AAWTSRKHG 877


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 188 ADPPNIQREKERVWKNQK 135
           ADP N QR K   W N +
Sbjct: 109 ADPKNPQRLKVSTWHNMR 126


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -1

Query: 248 VKEKKSKANMRKTTKGKRTTADPPNIQRE 162
           + +K++K+N+RK  K ++     P ++ +
Sbjct: 64  LSKKRTKSNLRKYVKRQKNAKIDPAVEEQ 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,403
Number of Sequences: 2352
Number of extensions: 3226
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)