Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0496.Seq
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog o...    30   3.2  
AF490258-1|AAO85466.1|  667|Homo sapiens XTP9 protein.                 29   5.5  
X99717-1|CAA68053.1|  754|Homo sapiens SRcyp protein protein.          29   7.3  
U40763-1|AAB40347.1|  754|Homo sapiens CARS-Cyp protein.               29   7.3  
BC111693-1|AAI11694.1|  739|Homo sapiens PPIG protein protein.         29   7.3  
BC109373-1|AAI09374.1|  448|Homo sapiens PPIG protein protein.         29   7.3  
AC016772-2|AAY24233.1|  571|Homo sapiens unknown protein.              29   7.3  
AB046765-1|BAB13371.2|  968|Homo sapiens KIAA1545 protein protein.     29   7.3  

>U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog of
           Drosophila splicing regulator
           suppressor-of-white-apricot mRNA, complete cds. ).
          Length = 951

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 281 GISAERTKSREVKEKKSKANMRKTTKGK-RTTADPPNIQ 168
           G S +RT+SR   EKK K   R  TK K R+ +  P+ Q
Sbjct: 836 GASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQ 874


>AF490258-1|AAO85466.1|  667|Homo sapiens XTP9 protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -1

Query: 293 IGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 114
           +G++G  AER     VKE +S A         R  A PP+ +     V   +++G   + 
Sbjct: 432 LGRSGAPAEREAEPRVKESRSPAKEEAAKMPAR--ASPPHSKAAPGDVKVKEERGEDEAS 489

Query: 113 LSPSRWVNPA 84
             P+  ++PA
Sbjct: 490 EPPAGGLHPA 499


>X99717-1|CAA68053.1|  754|Homo sapiens SRcyp protein protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 302 KFSIGKNGISAERTKSREVKEKKS---KANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
           + S G+  I  ++++  E+KE +    +   RK T   R  ++ PN + EKE+  K+ K 
Sbjct: 373 RVSSGERWIKGDKSELNEIKENQRSPVRVKERKITD-HRNVSESPNRKNEKEKKVKDHKS 431

Query: 131 GT 126
            +
Sbjct: 432 NS 433


>U40763-1|AAB40347.1|  754|Homo sapiens CARS-Cyp protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 302 KFSIGKNGISAERTKSREVKEKKS---KANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
           + S G+  I  ++++  E+KE +    +   RK T   R  ++ PN + EKE+  K+ K 
Sbjct: 373 RVSSGERWIKGDKSELNEIKENQRSPVRVKERKITD-HRNVSESPNRKNEKEKKVKDHKS 431

Query: 131 GT 126
            +
Sbjct: 432 NS 433


>BC111693-1|AAI11694.1|  739|Homo sapiens PPIG protein protein.
          Length = 739

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 302 KFSIGKNGISAERTKSREVKEKKS---KANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
           + S G+  I  ++++  E+KE +    +   RK T   R  ++ PN + EKE+  K+ K 
Sbjct: 358 RVSSGERWIKGDKSELNEIKENQRSPVRVKERKITD-HRNVSESPNRKNEKEKKVKDHKS 416

Query: 131 GT 126
            +
Sbjct: 417 NS 418


>BC109373-1|AAI09374.1|  448|Homo sapiens PPIG protein protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 302 KFSIGKNGISAERTKSREVKEKKS---KANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
           + S G+  I  ++++  E+KE +    +   RK T   R  ++ PN + EKE+  K+ K 
Sbjct: 373 RVSSGERWIKGDKSELNEIKENQRSPVRVKERKITD-HRNVSESPNRKNEKEKKVKDHKS 431

Query: 131 GT 126
            +
Sbjct: 432 NS 433


>AC016772-2|AAY24233.1|  571|Homo sapiens unknown protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 302 KFSIGKNGISAERTKSREVKEKKS---KANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
           + S G+  I  ++++  E+KE +    +   RK T   R  ++ PN + EKE+  K+ K 
Sbjct: 190 RVSSGERWIKGDKSELNEIKENQRSPVRVKERKITD-HRNVSESPNRKNEKEKKVKDHKS 248

Query: 131 GT 126
            +
Sbjct: 249 NS 250


>AB046765-1|BAB13371.2|  968|Homo sapiens KIAA1545 protein protein.
          Length = 968

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -1

Query: 293 IGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 114
           +G++G  AER     VKE +S A         R  A PP+ +     V   +++G   + 
Sbjct: 733 LGRSGAPAEREAEPRVKESRSPAKEEVAKMPAR--ASPPHSKAAPGDVKVKEERGEDEAS 790

Query: 113 LSPSRWVNPA 84
             P+  ++PA
Sbjct: 791 EPPAGGLHPA 800


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,990,768
Number of Sequences: 237096
Number of extensions: 531249
Number of successful extensions: 2349
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2314
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)