Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0496.Seq
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 37 0.008
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 32 0.17
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 32 0.17
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.17
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.17
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 31 0.39
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 31 0.39
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 0.68
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 0.68
AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical... 29 1.6
AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical ... 29 1.6
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 29 1.6
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 29 1.6
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 29 1.6
Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 28 2.7
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 2.7
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 28 2.7
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 28 3.6
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 28 3.6
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 28 3.6
Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical pr... 27 6.3
U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical... 27 6.3
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -1
Query: 278 ISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 132
IS E+T +E KEKK +A +K K R TA P N +++ E +N K
Sbjct: 91 ISKEKTGEKEKKEKKKEATQKK-QKSVRKTAKPKNEEKDAEAPVENDDK 138
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADP 180
TKS+EVKEKK K + K +GK+ P
Sbjct: 1287 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 1314
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADP 180
TKS+EVKEKK K + K +GK+ P
Sbjct: 1302 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 1329
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADP 180
TKS+EVKEKK K + K +GK+ P
Sbjct: 17113 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 17140
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADP 180
TKS+EVKEKK K + K +GK+ P
Sbjct: 17128 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 17155
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADP 180
RTH K ++GKNG +++T + EK K K K+ A+P
Sbjct: 635 RTHSKNTVGKNG-KSDKTGTSGSMEKAGSKEKDKKKKKKKDKANP 678
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = -1
Query: 446 KSDXDRNEYEXRGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKNGISAE 267
+ D + EY+ E QE+ + D RR+ + S KN S E
Sbjct: 608 RDDQEEEEYDAEEPEDQEEEEED-------EYQAEEYTPTPVTRRSSSRRSGAKNDESEE 660
Query: 266 RTKSREVKEKKSKA---NMRKTTKGKRTTADPPNIQREKERV 150
+ ++ KEK K R+ +K K+ ++E+ER+
Sbjct: 661 VSVKKDKKEKMEKVEKDEKRRNSKSKKDKISKEKKKKERERI 702
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 0.68
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -1
Query: 275 SAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 117
S+E S E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 275 SAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
S+E ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEE-ERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 0.68
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -1
Query: 275 SAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 117
S+E S E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 275 SAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
S+E ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEE-ERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.26 protein.
Length = 152
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -1
Query: 317 RRTHDK-FSIGKNGISAERTKSREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 153
RRT + S N + +SRE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 152 VWKNQKKGTASSRLSPSRWVNP 87
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.7 protein.
Length = 152
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -1
Query: 317 RRTHDK-FSIGKNGISAERTKSREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 153
RRT + S N + +SRE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 152 VWKNQKKGTASSRLSPSRWVNP 87
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -1
Query: 317 RRTHDK-FSIGKNGISAERTKSREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 153
RRT + S N + +SRE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 152 VWKNQKKGTASSRLSPSRWVNP 87
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -1
Query: 317 RRTHDK-FSIGKNGISAERTKSREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 153
RRT + S N + +SRE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 152 VWKNQKKGTASSRLSPSRWVNP 87
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = -1
Query: 317 RRTHDK-FSIGKNGISAERTKSREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 153
RRT + S N + +SRE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 152 VWKNQKKGTASSRLSPSRWVNP 87
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical
protein M28.9 protein.
Length = 861
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 311 THDKFSIGKNGISAERTKSREVKEKKSKA-NMRKTTKGKRTTAD 183
TH K S GK S + KS+E KEK+ K+ N K K K++ D
Sbjct: 703 THSKKSAGK---SDKMLKSKESKEKEEKSENKDKKKKKKKSKKD 743
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = -1
Query: 278 ISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSR 99
+SA + ++ K K ++ ++ +R+ PN ++EK R + G++S + +
Sbjct: 10 LSASESSRKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVR----NRSGSSSKKEKKNS 65
Query: 98 WVNP 87
VNP
Sbjct: 66 LVNP 69
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 254 REVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 135
R+ KEK K M T K K+ D ++EKER+ K +K
Sbjct: 236 RKEKEKVEKNKMEMTEKIKKKDEDE-KAKKEKERIDKEEK 274
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTA---DPPNIQREKERVWKNQKKGTASS 117
+++K ++ K+KKSK K K K + P +++ + E+ K KG S
Sbjct: 78 KKSKDKKPKDKKSKEKKPKAAKSKEVKSKDVKPKDVKSKDEKKKKKNSKGKKPS 131
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 278 ISAERTKSREVKEKKSKANMRKTTKGKRTTADP 180
+ ++ K ++VK K K +K +KGK+ + DP
Sbjct: 103 VKSKDVKPKDVKSKDEKKK-KKNSKGKKPSTDP 134
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 287 KNGISAERTKSREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQK 135
KNG+S R K ++ K+ KSK ++ K + A PN Q + + KN K
Sbjct: 46 KNGLSCCRKKKKKSKKSKSKVTKKQPKKKVIKPLAPVPNEQLGEVVLVKNVK 97
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 84
+K+ + KEKKSK + +K K + +++ + ER K ++ + R PS P
Sbjct: 116 SKAEKSKEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPR 171
Query: 83 *RSR 72
RSR
Sbjct: 172 KRSR 175
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -1
Query: 263 TKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 84
+K+ + KEKKSK + +K K + +++ + ER K ++ + R PS P
Sbjct: 116 SKAEKSKEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPR 171
Query: 83 *RSR 72
RSR
Sbjct: 172 KRSR 175
>Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical
protein F53B6.4 protein.
Length = 342
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKR--TTADPPNIQREKERVWKN 141
++ K + GK+G + + + K KSK TT G + T + + ++ K+
Sbjct: 114 KSSKKGTSGKSGKGSSKRGGKSSKSSKSKKVKTATTSGSQVSTVSAATGVSDKQSNSSKS 173
Query: 140 QKKGTASSRLSPSR 99
+K + SS+ +R
Sbjct: 174 SRKSSKSSKSRKNR 187
>Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical
protein C30H6.12 protein.
Length = 165
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 269 ERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
+++KSR +K+S + +KTT TT ++KE ++K SS SP+
Sbjct: 62 KKSKSRSGSKKRSSSQKKKTTT-TTTTKTSQKTAKKKEAKDVTKEKDRESSEGSPT 116
>Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical
protein C15A11.2 protein.
Length = 173
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 287 KNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
K G +R+K++ K+K S K+ T+ DP ++EK R
Sbjct: 10 KEGAEKKRSKTKTAKKKTSTLTHSKSV----TSTDPKEYEKEKRR 50
>U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical
protein C16D9.4 protein.
Length = 409
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 362 LCCMSRRCRYPPGVQIRVLHIHYDRN 439
LC + ++C PPG Q+ DRN
Sbjct: 348 LCALDQKCMNPPGAQVYCRFPDNDRN 373
>AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical
protein T07A9.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/63 (19%), Positives = 30/63 (47%)
Frame = -1
Query: 287 KNGISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLS 108
K I+ E+ EK+ K ++ T+ + +++K+R W+N+ + A+ + +
Sbjct: 4 KRKITDEKDAQHVPAEKREKVENWLKKSTEKPTSSQSDAEKKKKRPWRNKVRKLAAKKAA 63
Query: 107 PSR 99
+
Sbjct: 64 ADK 66
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 278 ISAERTKSREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 102
I+ + + E E +KA+ +T TT PP + + A+++ SPS
Sbjct: 124 ITTTKASTLEPPEAPTKASTARTISTTETTTSPPTTTVTPRTTRSSTARTVATTKTSPS 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,478,822
Number of Sequences: 27780
Number of extensions: 81529
Number of successful extensions: 563
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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