Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0496.Seq
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 0.38
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 0.38
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 25 0.38
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 0.38
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.38
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 3.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 8.2
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 8.2
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.38
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERT------KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
R ++K K + ERT +SRE +EKKS N K + T+ + ++E+ER
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSRE-REKKSYKNENSYRKYRETSKERSRDRKERER 75
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.38
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERT------KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
R ++K K + ERT +SRE +EKKS N K + T+ + ++E+ER
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSRE-REKKSYKNENSYRKYRETSKERSRDRKERER 75
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 25.0 bits (52), Expect = 0.38
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERT------KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
R ++K K + ERT +SRE +EKKS N K + T+ + ++E+ER
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSRE-REKKSYKNENSYRKYRETSKERSRDRKERER 75
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.38
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERT------KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
R ++K K + ERT +SRE +EKKS N K + T+ + ++E+ER
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSRE-REKKSYKNENSYRKYRETSKERSRDRKERER 75
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.0 bits (52), Expect = 0.38
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 314 RTHDKFSIGKNGISAERT------KSREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 153
R ++K K + ERT +SRE +EKKS N K + T+ + ++E+ER
Sbjct: 250 RRYEKLHNEKEKLLEERTSRKRYSRSRE-REKKSYKNENSYRKYRETSKERSRDRKERER 308
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/43 (20%), Positives = 20/43 (46%)
Frame = -1
Query: 308 HDKFSIGKNGISAERTKSREVKEKKSKANMRKTTKGKRTTADP 180
H+ S+ I + R++ EK+ + ++ ++ T DP
Sbjct: 60 HNVHSLAFGAIQLRQLLKRQLCEKRKEVSIITEDSSRKQTIDP 102
Score = 20.6 bits (41), Expect = 8.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 251 EVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 150
E+ + K + +RK K DP E+ RV
Sbjct: 592 ELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRV 625
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 332 PLHRIFRIRNLCCMSRRCRYPP 397
P ++ N C +RRC PP
Sbjct: 1684 PRRHMYEELNHCAPNRRCPPPP 1705
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 20.6 bits (41), Expect = 8.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 251 EVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 150
E+ + K + +RK K DP E+ RV
Sbjct: 358 ELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRV 391
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 20.6 bits (41), Expect = 8.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 251 EVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 150
E+ + K + +RK K DP E+ RV
Sbjct: 273 ELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRV 306
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,340
Number of Sequences: 438
Number of extensions: 957
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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