Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0493.Seq
         (398 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0148 - 1337494-1338057                                           27   7.2  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    26   9.5  

>01_01_0148 - 1337494-1338057
          Length = 187

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 57  DENTFGKCFR*CSSCDDP 110
           DE   G+CFR C +C DP
Sbjct: 72  DELEPGQCFRQCEACRDP 89


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 114 FLDRRKTNISESICQRCFHQSRTKVRGSKAIRY 16
           +++    N   SIC RC H S  K +  K   Y
Sbjct: 561 YVEVENGNDKSSICGRCHHLSSAKAKYQKRFSY 593


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,709,993
Number of Sequences: 37544
Number of extensions: 135742
Number of successful extensions: 275
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)