Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0493.Seq
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119617-1|AAM50271.1|  462|Drosophila melanogaster LD44530p pro...    27   7.0  
AY058322-1|AAL13551.1|  684|Drosophila melanogaster GH09291p pro...    27   7.0  
AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase ...    27   7.0  
AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA...    27   7.0  
AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD...    27   7.0  
AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC...    27   7.0  
AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB...    27   7.0  
AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE...    27   7.0  

>AY119617-1|AAM50271.1|  462|Drosophila melanogaster LD44530p
           protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306 LTEEHRDRILILNRRFLERR 365
           L+E+HRD +  +NR FL+++
Sbjct: 246 LSEKHRDHLATINRNFLQQK 265


>AY058322-1|AAL13551.1|  684|Drosophila melanogaster GH09291p
           protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306 LTEEHRDRILILNRRFLERR 365
           L+E+HRD +  +NR FL+++
Sbjct: 468 LSEKHRDHLATINRNFLQQK 487


>AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase
            kinase 1 protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


>AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA,
            isoform A protein.
          Length = 1300

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


>AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD,
            isoform D protein.
          Length = 1703

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


>AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC,
            isoform C protein.
          Length = 1703

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


>AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB,
            isoform B protein.
          Length = 1703

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


>AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE,
            isoform E protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 306  LTEEHRDRILILNRRFLERR 365
            L+E+HRD +  +NR FL+++
Sbjct: 1084 LSEKHRDHLATINRNFLQQK 1103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,922
Number of Sequences: 53049
Number of extensions: 239585
Number of successful extensions: 526
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)