Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0489.Seq
(399 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F837 Cluster: Eukaryotic translation elongation facto... 81 8e-15
UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397; ro... 77 1e-13
UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;... 76 3e-13
UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224; cell... 72 5e-12
UniRef50_UPI0000EB0538 Cluster: UPI0000EB0538 related cluster; n... 61 9e-09
UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3; Coeloma... 61 9e-09
UniRef50_UPI0000D9D957 Cluster: PREDICTED: similar to eukaryotic... 55 4e-07
UniRef50_UPI0000F308E4 Cluster: UPI0000F308E4 related cluster; n... 55 4e-07
UniRef50_P35021 Cluster: Elongation factor 1-alpha; n=53; cellul... 53 2e-06
UniRef50_UPI0000EB403C Cluster: UPI0000EB403C related cluster; n... 52 3e-06
UniRef50_UPI00006CC36B Cluster: Elongation factor Tu C-terminal ... 51 1e-05
UniRef50_A4VDD2 Cluster: Elongation factor 1-alpha; n=1; Tetrahy... 49 4e-05
UniRef50_Q22GX7 Cluster: Elongation factor Tu C-terminal domain ... 47 1e-04
UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porph... 47 1e-04
UniRef50_O93729 Cluster: Elongation factor 1-alpha; n=20; Archae... 44 8e-04
UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genom... 42 0.003
UniRef50_A7D4X8 Cluster: Translation elongation factor EF-1, sub... 41 0.008
UniRef50_Q9HGI4 Cluster: Eukaryotic peptide chain release factor... 40 0.024
UniRef50_Q07089 Cluster: SUP35 protein; n=3; Saccharomyces cerev... 39 0.041
UniRef50_P05453 Cluster: Eukaryotic peptide chain release factor... 39 0.041
UniRef50_UPI0000499ED8 Cluster: guanine nucleotide regulatory pr... 38 0.072
UniRef50_Q6JIY6 Cluster: Translation elongation factor 1 alpha; ... 38 0.096
UniRef50_Q8IIC9 Cluster: Translation elongation factor EF-1, sub... 37 0.13
UniRef50_P15170 Cluster: G1 to S phase transition protein 1 homo... 36 0.22
UniRef50_Q5KFJ4 Cluster: Translation release factor, putative; n... 36 0.29
UniRef50_O45622 Cluster: Putative uncharacterized protein; n=2; ... 34 0.89
UniRef50_A5X901 Cluster: Elongation factor 1-alpha; n=2; Chilodo... 34 0.89
UniRef50_Q9LM39 Cluster: T10O22.4; n=7; Magnoliophyta|Rep: T10O2... 33 1.6
UniRef50_A4ZCD1 Cluster: GTP-binding protein; n=9; Magnoliophyta... 33 1.6
UniRef50_A7RM15 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 33 1.6
UniRef50_O74718 Cluster: Eukaryotic peptide chain release factor... 33 2.1
UniRef50_UPI00005A57EA Cluster: PREDICTED: similar to eukaryotic... 33 2.7
UniRef50_Q8I5A4 Cluster: Pre-mRNA splicing factor RNA helicase, ... 33 2.7
UniRef50_O13354 Cluster: Eukaryotic peptide chain release factor... 33 2.7
UniRef50_Q259E7 Cluster: H0801D08.2 protein; n=5; Oryza sativa|R... 32 4.8
UniRef50_A2WJZ4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_Q9NCN7 Cluster: Eukaryotic release factor 3 GTPase subu... 32 4.8
UniRef50_Q86NR4 Cluster: RE29053p; n=5; Diptera|Rep: RE29053p - ... 32 4.8
UniRef50_A0BK03 Cluster: Chromosome undetermined scaffold_111, w... 32 4.8
UniRef50_A6RDX5 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 8.3
>UniRef50_Q2F837 Cluster: Eukaryotic translation elongation factor 1
alpha 1; n=25; Coelomata|Rep: Eukaryotic translation
elongation factor 1 alpha 1 - Homo sapiens (Human)
Length = 93
Score = 81.0 bits (191), Expect = 8e-15
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
VP KP+CVE F ++PPLGR AVRDMRQT AVGVIKAV+ K AG GKVTK
Sbjct: 36 VPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK 84
>UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397;
root|Rep: Elongation factor 1-alpha 2 - Homo sapiens
(Human)
Length = 463
Score = 77.0 bits (181), Expect = 1e-13
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
VP KP+CVE F ++PPLGR AVRDMRQT AVGVIK V K G GKVTK
Sbjct: 405 VPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTK 453
>UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;
n=6; Fungi/Metazoa group|Rep: Elongation factor
1-alpha-like protein - Magnaporthe grisea (Rice blast
fungus) (Pyricularia grisea)
Length = 473
Score = 75.8 bits (178), Expect = 3e-13
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
+PSKP+CVE F E+PPLGR AVRDMRQT AVGVIK+V+ + GKVTK
Sbjct: 417 IPSKPMCVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKSQGTQGKVTK 465
>UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224;
cellular organisms|Rep: Elongation factor 1-alpha -
Arabidopsis thaliana (Mouse-ear cress)
Length = 449
Score = 71.7 bits (168), Expect = 5e-12
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
P+KP+ VE F E+PPLGR AVRDMRQT AVGVIK+V+ K+ G KVTK
Sbjct: 394 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTK 441
>UniRef50_UPI0000EB0538 Cluster: UPI0000EB0538 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0538 UniRef100
entry - Canis familiaris
Length = 357
Score = 60.9 bits (141), Expect = 9e-09
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
VP KP+CVE F P LGR AV DMRQT AVGVI+AV+ K AG G V+K
Sbjct: 301 VPGKPMCVESFS--PLLGRFAVCDMRQTVAVGVIQAVDKKAAGAGHVSK 347
>UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3;
Coelomata|Rep: Elongation factor-1 alpha - Anduzedoras
oxyrhynchus
Length = 257
Score = 60.9 bits (141), Expect = 9e-09
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFK 278
+P KP+CVE F ++PP GR A RDMRQT AVGVIK+V+ K
Sbjct: 218 IPGKPMCVESFSKYPPPGRFAARDMRQTVAVGVIKSVDKK 257
>UniRef50_UPI0000D9D957 Cluster: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2; n=1; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2 - Macaca mulatta
Length = 151
Score = 55.2 bits (127), Expect = 4e-07
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFK 278
VP K +CVE F ++PPLG AV DMRQT A GVIKAV+ K
Sbjct: 92 VPGKSMCVESFSDWPPLGCFAVCDMRQTVATGVIKAVDKK 131
>UniRef50_UPI0000F308E4 Cluster: UPI0000F308E4 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F308E4 UniRef100 entry - Bos
Taurus
Length = 428
Score = 55.2 bits (127), Expect = 4e-07
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
VP KP C + F ++ PLG AVRD QT GVIKAV+ AG KVTK
Sbjct: 371 VPGKPTCADSFSKYLPLGHFAVRDTWQTVPAGVIKAVDKTAAGAVKVTK 419
>UniRef50_P35021 Cluster: Elongation factor 1-alpha; n=53; cellular
organisms|Rep: Elongation factor 1-alpha - Sulfolobus
solfataricus
Length = 435
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
P KPLCVE + EFPPLGR A+RDM +T VG+I
Sbjct: 392 PIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGII 424
>UniRef50_UPI0000EB403C Cluster: UPI0000EB403C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB403C UniRef100
entry - Canis familiaris
Length = 300
Score = 52.4 bits (120), Expect = 3e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTK 251
VP KP+CVE ++P L ++ D+ Q AVGVIKAV+ + AG GKVTK
Sbjct: 244 VPGKPMCVESSSDYP-LHHFSICDITQMVAVGVIKAVDKETAGAGKVTK 291
>UniRef50_UPI00006CC36B Cluster: Elongation factor Tu C-terminal
domain containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Elongation factor Tu C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 441
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKE 275
P+KPL VE F + PPLGR VRDM A+G+IK V +K+
Sbjct: 402 PTKPLSVEKFSQCPPLGRFIVRDMNTIVAIGIIKEVVYKQ 441
>UniRef50_A4VDD2 Cluster: Elongation factor 1-alpha; n=1;
Tetrahymena thermophila SB210|Rep: Elongation factor
1-alpha - Tetrahymena thermophila SB210
Length = 356
Score = 48.8 bits (111), Expect = 4e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFK 278
P K +CVE F PLGR +RDM+ A+G+IK+VN+K
Sbjct: 318 PRKAVCVETFANNAPLGRFIIRDMKVVVAIGIIKSVNYK 356
>UniRef50_Q22GX7 Cluster: Elongation factor Tu C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Elongation factor Tu C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 432
Score = 47.2 bits (107), Expect = 1e-04
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
P +PLC+E + ++PPLGR ++D QT AVG+++ V
Sbjct: 391 PLQPLCIEEYSQYPPLGRFILKDSDQTTAVGIVQKV 426
>UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porphyra
purpurea|Rep: Elongation factor 1-alpha S - Porphyra
purpurea
Length = 515
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGGKVTKL 248
P+K + VE + + PLGR AVRDM++T AVGVI+ V + G +L
Sbjct: 439 PTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRNMAKGATEEL 487
>UniRef50_O93729 Cluster: Elongation factor 1-alpha; n=20;
Archaea|Rep: Elongation factor 1-alpha - Pyrobaculum
aerophilum
Length = 444
Score = 44.4 bits (100), Expect = 8e-04
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
P KP+ E F +FPPLGR A+RDM +T A G I V
Sbjct: 401 PLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEV 436
>UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 154
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3
Query: 355 PPLGRXAVRDMRQTXAVGVIKAV 287
PPLGR AVRDMRQT AVGVIK V
Sbjct: 120 PPLGRFAVRDMRQTVAVGVIKNV 142
>UniRef50_A7D4X8 Cluster: Translation elongation factor EF-1,
subunit alpha; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: Translation elongation factor EF-1, subunit
alpha - Halorubrum lacusprofundi ATCC 49239
Length = 540
Score = 41.1 bits (92), Expect = 0.008
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVN 284
P KPL +E E P LG A+RDM QT A G + VN
Sbjct: 502 PQKPLSIEPSGEIPELGSFAIRDMGQTIAAGKVLEVN 538
>UniRef50_Q9HGI4 Cluster: Eukaryotic peptide chain release factor
GTP-binding subunit; n=2; Zygosaccharomyces rouxii|Rep:
Eukaryotic peptide chain release factor GTP-binding
subunit - Zygosaccharomyces rouxii (Candida mogii)
Length = 662
Score = 39.5 bits (88), Expect = 0.024
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3
Query: 388 KPLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
+P+CVE +Q++P LGR +RD T A+G I
Sbjct: 627 RPVCVETYQDYPQLGRFTLRDQGTTIAIGKI 657
>UniRef50_Q07089 Cluster: SUP35 protein; n=3; Saccharomyces
cerevisiae|Rep: SUP35 protein - Saccharomyces cerevisiae
(Baker's yeast)
Length = 224
Score = 38.7 bits (86), Expect = 0.041
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 385 PLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
P+CVE +Q++P LGR +RD T A+G I
Sbjct: 190 PVCVETYQDYPQLGRFTLRDQGTTIAIGKI 219
>UniRef50_P05453 Cluster: Eukaryotic peptide chain release factor
GTP-binding subunit; n=50; Ascomycota|Rep: Eukaryotic
peptide chain release factor GTP-binding subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 685
Score = 38.7 bits (86), Expect = 0.041
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 385 PLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
P+CVE +Q++P LGR +RD T A+G I
Sbjct: 651 PVCVETYQDYPQLGRFTLRDQGTTIAIGKI 680
>UniRef50_UPI0000499ED8 Cluster: guanine nucleotide regulatory
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
guanine nucleotide regulatory protein - Entamoeba
histolytica HM-1:IMSS
Length = 488
Score = 37.9 bits (84), Expect = 0.072
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 391 SKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
+KP+C+E ++ FP LGR +RD +T A G I
Sbjct: 450 AKPICIEPYELFPQLGRFTLRDAGKTIAFGKI 481
>UniRef50_Q6JIY6 Cluster: Translation elongation factor 1 alpha;
n=3; Microsporidia|Rep: Translation elongation factor 1
alpha - Antonospora locustae (Nosema locustae)
Length = 478
Score = 37.5 bits (83), Expect = 0.096
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 397 VPSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKE 275
VP KP+ +E ++FP L R A+RD + A+G I V KE
Sbjct: 407 VPQKPIVMEVLKDFPSLSRFALRDGGKIVAIGSIVEVLTKE 447
>UniRef50_Q8IIC9 Cluster: Translation elongation factor EF-1,
subunit alpha, putative; n=11; Apicomplexa|Rep:
Translation elongation factor EF-1, subunit alpha,
putative - Plasmodium falciparum (isolate 3D7)
Length = 555
Score = 37.1 bits (82), Expect = 0.13
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 391 SKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
S P+CVE + P LGR +RD +T A+G I
Sbjct: 519 SNPVCVEVYDNLPQLGRFTLRDQGKTIAIGKI 550
>UniRef50_P15170 Cluster: G1 to S phase transition protein 1
homolog; n=77; Eukaryota|Rep: G1 to S phase transition
protein 1 homolog - Homo sapiens (Human)
Length = 499
Score = 36.3 bits (80), Expect = 0.22
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 382 LCVEXFQEFPPLGRXAVRDMRQTXAVG-VIKAVNFKE 275
+C+E F++FP +GR +RD +T A+G V+K V K+
Sbjct: 463 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
>UniRef50_Q5KFJ4 Cluster: Translation release factor, putative; n=3;
Eukaryota|Rep: Translation release factor, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 757
Score = 35.9 bits (79), Expect = 0.29
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 391 SKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
S P+C+E F+++ LGR +RD +T A+G +
Sbjct: 704 SAPICIERFEDYKMLGRFTLRDEGKTVAIGKV 735
>UniRef50_O45622 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 532
Score = 34.3 bits (75), Expect = 0.89
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 388 KPLCVEXFQEFPPLGRXAVRDMRQTXAVG-VIKAV 287
+P +E F+E+P LGR +RD +T A+G V+K V
Sbjct: 497 EPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>UniRef50_A5X901 Cluster: Elongation factor 1-alpha; n=2;
Chilodonella uncinata|Rep: Elongation factor 1-alpha -
Chilodonella uncinata
Length = 403
Score = 34.3 bits (75), Expect = 0.89
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRD 326
P KP+ VE F+++P LGR A+RD
Sbjct: 379 PIKPVAVEAFKKYPALGRFAIRD 401
>UniRef50_Q9LM39 Cluster: T10O22.4; n=7; Magnoliophyta|Rep: T10O22.4
- Arabidopsis thaliana (Mouse-ear cress)
Length = 615
Score = 33.5 bits (73), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 382 LCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
+C+E F +FP LGR +R +T AVG +
Sbjct: 577 ICIEKFSDFPQLGRFTLRTEGKTIAVGKV 605
>UniRef50_A4ZCD1 Cluster: GTP-binding protein; n=9;
Magnoliophyta|Rep: GTP-binding protein - Triticum
aestivum (Wheat)
Length = 533
Score = 33.5 bits (73), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 382 LCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
+C+E F +FP LGR +R +T AVG +
Sbjct: 492 ICIEKFSDFPQLGRFTLRTEGKTIAVGKV 520
>UniRef50_A7RM15 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 473
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 391 SKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
S+P+CVE ++++ LGR +R T A GVI V
Sbjct: 439 SRPVCVELYKDYKDLGRFMLRYGGNTIAAGVITQV 473
>UniRef50_O74718 Cluster: Eukaryotic peptide chain release factor
GTP-binding subunit; n=2; Schizosaccharomyces pombe|Rep:
Eukaryotic peptide chain release factor GTP-binding
subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 33.1 bits (72), Expect = 2.1
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 385 PLCVEXFQEFPPLGRXAVRDMRQTXAVG-VIKAVN 284
P+C+E F+++ +GR +RD T AVG V+K ++
Sbjct: 628 PVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKILD 662
>UniRef50_UPI00005A57EA Cluster: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2; n=2; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2 - Canis
familiaris
Length = 190
Score = 32.7 bits (71), Expect = 2.7
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -3
Query: 322 RQTXAVGVIKAVNFKEAGGGKVTK 251
RQT +VGVI+AV+ + G GK+TK
Sbjct: 158 RQTVSVGVIEAVDERAVGAGKITK 181
>UniRef50_Q8I5A4 Cluster: Pre-mRNA splicing factor RNA helicase,
putative; n=1; Plasmodium falciparum 3D7|Rep: Pre-mRNA
splicing factor RNA helicase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1168
Score = 32.7 bits (71), Expect = 2.7
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 210 VNSTIFXTTAILHSPKGVSKEKRATNSFLFYIFYKACNVTLFYNLYKVI--HNISETFCY 37
V S + I + KG KEK A N +I + LF N+YK +N S +FCY
Sbjct: 978 VASMLTHANNIFYVQKG--KEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCY 1035
Query: 36 D 34
D
Sbjct: 1036 D 1036
>UniRef50_O13354 Cluster: Eukaryotic peptide chain release factor
GTP-binding subunit; n=31; cellular organisms|Rep:
Eukaryotic peptide chain release factor GTP-binding
subunit - Candida albicans (Yeast)
Length = 715
Score = 32.7 bits (71), Expect = 2.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 382 LCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
+C E ++++P LGR +RD T A+G I
Sbjct: 683 VCAETYKDYPQLGRFTLRDQGTTIAIGKI 711
>UniRef50_Q259E7 Cluster: H0801D08.2 protein; n=5; Oryza sativa|Rep:
H0801D08.2 protein - Oryza sativa (Rice)
Length = 654
Score = 31.9 bits (69), Expect = 4.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 388 KPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
K +CVE F LGR +R T AVG++ V
Sbjct: 617 KEVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>UniRef50_A2WJZ4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 806
Score = 31.9 bits (69), Expect = 4.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 385 PLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
P+CVE F + LGR +R T AVGV+ V
Sbjct: 768 PVCVEEFSKCRALGRAFLRSCGSTIAVGVVTRV 800
>UniRef50_Q9NCN7 Cluster: Eukaryotic release factor 3 GTPase
subunit; n=2; Trichomonas vaginalis|Rep: Eukaryotic
release factor 3 GTPase subunit - Trichomonas vaginalis
Length = 587
Score = 31.9 bits (69), Expect = 4.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 385 PLCVEXFQEFPPLGRXAVRDMRQTXAVGVI 296
P+CVE ++FP LGR +R T VG++
Sbjct: 549 PICVEVAKDFPQLGRFIIRKEGFTTIVGLV 578
>UniRef50_Q86NR4 Cluster: RE29053p; n=5; Diptera|Rep: RE29053p -
Drosophila melanogaster (Fruit fly)
Length = 670
Score = 31.9 bits (69), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 391 SKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAV 287
S+P+C+E + +F LGR +R T A G++ +
Sbjct: 635 SRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
>UniRef50_A0BK03 Cluster: Chromosome undetermined scaffold_111,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_111,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 446
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 394 PSKPLCVEXFQEFPPLGRXAVRDMRQTXAVGVIKAVNFKE 275
P K + +E ++P LG+ A+ D R A GVI V KE
Sbjct: 395 PIKQITLENHFDYPQLGKIAIVDNRHMIAYGVILEVKKKE 434
>UniRef50_A6RDX5 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 449
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 361 EFPPLGRXAVRDMRQTXAVGVIKAVNFKEAGGG 263
EFPPLGR A D+ Q ++++ F GGG
Sbjct: 140 EFPPLGRNAPADIGQERRASLLQSGAFGNYGGG 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,768,213
Number of Sequences: 1657284
Number of extensions: 4482634
Number of successful extensions: 10329
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10325
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -