Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0485.Seq
(499 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 38 8e-04
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 34 0.010
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 31 0.13
SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1 |Schizosa... 31 0.13
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 30 0.17
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 30 0.22
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 0.51
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 28 0.68
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 28 0.68
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 28 0.90
SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces pomb... 28 0.90
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 1.2
SPBC14C8.12 |rpb8||DNA-directed RNA polymerase I, II and III sub... 27 1.2
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 27 1.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.2
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 27 2.1
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 27 2.1
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 27 2.1
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 2.7
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 26 2.7
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 2.7
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 2.7
SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyc... 26 2.7
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 2.7
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 26 2.7
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 2.7
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 2.7
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 2.7
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.6
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 3.6
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 26 3.6
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 3.6
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 3.6
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 26 3.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 26 3.6
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.6
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 3.6
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 3.6
SPAC664.08c |||traub transciption factor family protein |Schizos... 26 3.6
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 26 3.6
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 25 4.8
SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2 |Schizosacc... 25 4.8
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 25 4.8
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 25 4.8
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 25 4.8
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 4.8
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 25 4.8
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 25 4.8
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 6.3
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.3
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 6.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 25 6.3
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 6.3
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.3
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 6.3
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 25 6.3
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 8.4
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 8.4
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 25 8.4
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 8.4
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 8.4
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 8.4
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 8.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 8.4
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 8.4
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 25 8.4
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 37.9 bits (84), Expect = 8e-04
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAES---STYRDKNRSVNSGSERKSSGKDEEYSE-QN 97
E + +E +K S+ S E + E+ES S+ ++ V +E K G E S+ ++
Sbjct: 151 EAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSES 210
Query: 96 SSNKSFNDGDASADYQTKSKKVEKNSARDKKK 1
SS+ S GD+ + ++S ++S+ D+KK
Sbjct: 211 SSDSSSESGDSDSSSDSES----ESSSEDEKK 238
Score = 34.3 bits (75), Expect = 0.010
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER--KSSGKDEEYSEQNSSNKSFND 73
E SES S E E+ +ES + ++ S S E K+ K E SE +SS++S +
Sbjct: 90 ESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEE 149
Query: 72 GDASADYQTKSKKVEKNSA 16
+A + K + +S+
Sbjct: 150 EEAVVKIEEKKESSSDSSS 168
Score = 33.9 bits (74), Expect = 0.014
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK-SFNDG 70
E SES +S E++ + S + + S +S SE SS +EE + K S ++
Sbjct: 81 EESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSES 140
Query: 69 DASADYQTKSKKVEK 25
+S++ + + + V K
Sbjct: 141 SSSSESEEEEEAVVK 155
Score = 31.9 bits (69), Expect = 0.055
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS--GKDEEYSEQNSSNKSFND 73
E SES S E + E+E S SE SS ++EE + K +
Sbjct: 104 ESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESS 163
Query: 72 GDASADYQTKSKKVEKNSARDKKK 1
D+S++ + + E +S+ +++
Sbjct: 164 SDSSSESSSSESESESSSSESEEE 187
Score = 31.5 bits (68), Expect = 0.073
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = -2
Query: 237 KSESNKKSREFENKEAESSTYRDK---NRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 67
+SES+ E + E+ESS+ + + S +S SE + K EE E +S + S ++ +
Sbjct: 88 ESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESE 147
Query: 66 ASADYQTKSKKVEKNSA 16
+ K ++ +++S+
Sbjct: 148 EEEEAVVKIEEKKESSS 164
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 34.3 bits (75), Expect = 0.010
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAESSTYRDKNRSV----NSGSERKSSGKDEE-YSEQ 100
EE + E S S +S E E++ ES K ++V +S S+ +SS ++EE SE+
Sbjct: 39 EEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEE 98
Query: 99 NS--SNKSFNDGDASADYQTKSKKVEKNSARDK 7
+S S++S ++ ++ ++ + +S+ E++ ++
Sbjct: 99 DSEVSDESESESESESESEEESESEEESDESER 131
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 234 SESNKKSREFENKE-AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 79
SES+++ E E++E +E S + S SE +S ++E + S SF
Sbjct: 85 SESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSF 137
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = -2
Query: 201 NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVE 28
+ +AES ++NR +S +++ EE S + S S + + +++ +VE
Sbjct: 11 DSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVE 68
Score = 25.8 bits (54), Expect = 3.6
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -2
Query: 240 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDAS 61
++SES +S E E++E ES + + + S SG S K E E + F G++S
Sbjct: 104 DESESESES-ESESEE-ESESEEESDESERSGP--SSFLKKPEKEEAKPAGLKFLRGESS 159
Query: 60 ADY--QTKSKKVEKNSARDKK 4
+ + + ++V K SA+DK+
Sbjct: 160 EESSDEEEGRRVVK-SAKDKR 179
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 0.13
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 70
+ER + NKKSR +E + R+K S +E+ S KD+ +N+ N +ND
Sbjct: 34 LERNNKQKNKKSRNQVRRE-KKKLLREKTNSGAKLAEKNSDDKDQ--LTENNDNL-YNDK 89
Query: 69 DASADYQTKSK 37
++ ++ +K
Sbjct: 90 KSNGNFYDTNK 100
>SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 30.7 bits (66), Expect = 0.13
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 115
+ERL VE+E +++K E N E E +DK +S N RK S K E
Sbjct: 277 QERLPVEKE--QNDKSDEEGSNNEQEEK--QDKKQSTNRDLCRKESCKKE 322
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 30.3 bits (65), Expect = 0.17
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 67
E E ++++ + ++ E S + + +++ K +S + SSN S ND D
Sbjct: 127 ENEIADNDLEPEVYDILYEEESKLGESRDLIRRLKQKRFETKKNNFSVKESSNLSNNDSD 186
Query: 66 ASADYQT 46
AS D T
Sbjct: 187 ASLDEDT 193
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 29.9 bits (64), Expect = 0.22
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 261 ERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 103
ER ERE E+ ++ R ++ ++S RD+ R + +E + K++E E
Sbjct: 248 ERFRSEREAREAARELRRQQDNAYQASLARDRERQAFARAEEERLAKEKEERE 300
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.7 bits (61), Expect = 0.51
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -2
Query: 267 LEERLTVEREKSESNK---KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 97
L + T + +E+N K++ + S DK+R+ S K S K++
Sbjct: 452 LSSKKTANSQATENNNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNKDSEKNDNNDASL 511
Query: 96 SSNKSFNDGDASADYQ-TKSKKVEKNSA 16
S +DG++S + TK+ K +K A
Sbjct: 512 QSAGVASDGESSPETPLTKASKSKKAKA 539
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 28.3 bits (60), Expect = 0.68
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 324 IFRDRNQ*IIRNEDRQA*WLEERLTVEREKSES-NKKSREFENKEAESSTY 175
IFR R + + + D + W+ ER+ +ER+ S+ +K + + K S +
Sbjct: 25 IFRQRLEQVRLDNDMLSQWIRERMDIERQYSDQLHKLAMNMQEKNNSSFAF 75
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 0.68
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -2
Query: 294 RNEDRQA*WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 115
+ ED++ EE T + KSE KK E + +E SST + S + + S+ KD+
Sbjct: 198 KEEDKEI-HSEENETKDEIKSE--KKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQ 254
Query: 114 EYSEQNSSN 88
E+ ++
Sbjct: 255 PSEEEEKTS 263
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 0.90
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 234 SESNKKSREFENKEAESSTYRDKNRSVNSGSER--KSSGKDEEYSEQNSSNKSFNDGDAS 61
+E+ +K+ N + + D +V + SE+ K KD++ ++ S K + DAS
Sbjct: 425 AEAYEKALSSVNIDGDEEVDIDVEETVETISEKPSKKEKKDKKEKKKEKSKKKRSADDAS 484
Query: 60 ADYQTKSKKVEKN 22
+ + KSKK +K+
Sbjct: 485 EEVK-KSKKKKKS 496
>SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 0.90
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 240 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN--SSNKSFNDGD 67
EK++S S E E AE+S DKN +E ++ DE+ Q+ +N N D
Sbjct: 175 EKTKS-PISNENEKSAAETSIKEDKNGDAAKKNEGSANQDDEKLHSQSLVGNNCEVNSED 233
Query: 66 ASADYQTK 43
+D +++
Sbjct: 234 EFSDLESE 241
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.5 bits (58), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 70
V RE+S +NK E + +DKN+ + E +S ++ S SN S N G
Sbjct: 1493 VSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGE-SNSRQNNAISRAGRSNGS-NRG 1550
Query: 69 DASAD 55
+ S D
Sbjct: 1551 NDSRD 1555
Score = 26.6 bits (56), Expect = 2.1
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -2
Query: 237 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 58
+S + + + + + ST+ N+ S + S EE +NS ++ D
Sbjct: 1543 RSNGSNRGNDSRDADGRRSTHYASNKRPRSSDSQSPSNLREEDERENSRRRARQDDRRDR 1602
Query: 57 DYQTKSKKVE---KNSARDKKK 1
D + + + SAR++K+
Sbjct: 1603 DSRQQRDRPRDRTSRSAREEKR 1624
>SPBC14C8.12 |rpb8||DNA-directed RNA polymerase I, II and III
subunit Rpb8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 125
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -2
Query: 183 STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKK 4
S D N +++ S+ KD +S Q +SN + D +ADY K A+D+K
Sbjct: 31 SGQNDMNLTLDINSQIYPLEKDATFSLQITSNLNSPDLKEAADYIMYGKVYRVEEAKDEK 90
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 1.2
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN-D 73
+E EK E+N + N+E E+++ +S S + + E E+N+ N +
Sbjct: 437 LEDEKEENNTAAESLINQE-ETTSGEAVTKSTVESSANEEEAEPNEIIEENAVKSLLNQE 495
Query: 72 GDASADYQTKSKKVEKNSARDK 7
G A+ +++VEKN+A +
Sbjct: 496 GPAT------NEEVEKNNANSE 511
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 246 EREKSESNKKSREFEN---KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 79
+R++ K RE+ + K+ + Y D S S +K S + + Y+E+ + ++S+
Sbjct: 317 KRDRDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDRSY 375
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 26.6 bits (56), Expect = 2.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAES--STYRDKNR-SVNSGSERKSSG 124
E+R+ EK + +K RE K AES + YR R + G + ++ G
Sbjct: 32 EQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEG 81
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE-EYSEQNSSNKSFND 73
VE+ + +K+ + + +T K + N E + KD + S N S N
Sbjct: 66 VEKSVNYLLQKASSKAGAKEKQNTDSQKEKKQNKSKEALADAKDPLDESSNGIKNLSLNK 125
Query: 72 GDASADYQTKSKKVEKNSA 16
D A +QT + KNS+
Sbjct: 126 NDEPA-FQTNGEVKMKNSS 143
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 26.6 bits (56), Expect = 2.1
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 219 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA--SADYQT 46
+ E E +E E + V +GS+ K D+E S ++ + D + SA
Sbjct: 341 EEEEEEEQEEEQEEDEEDEEEVGAGSDIKGFDADKEASVARATINKYEDDEVIPSAVETD 400
Query: 45 KSKKVEKNSARD 10
+S+ V + S D
Sbjct: 401 RSETVTETSVGD 412
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.2 bits (55), Expect = 2.7
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFEN----KEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 103
W + ++RE E + SR+F N K ST K R++ +GS ++ K E SE
Sbjct: 1202 WNKVMDDIQREMLEEEQSSRDFVNRTKKKPRGKSTGTRKPRAI-AGSSSSTAVKKEASSE 1260
Query: 102 QNSS 91
S
Sbjct: 1261 SKPS 1264
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 2.7
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = -2
Query: 288 EDRQA*WLEERLTVEREKSESNKKSREFENKEAESSTYRDKN-----RSVNSGSERKSSG 124
E + +L+E + S+ +K+R+ + S + N RS + S+ K
Sbjct: 19 EKSETVFLDEAAITKPPASKKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKP 78
Query: 123 KDEEYSEQNSSNKSFND 73
DE+ E ++NK+ +D
Sbjct: 79 LDEKVKELENANKTLSD 95
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 347
Score = 26.2 bits (55), Expect = 2.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 168 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSAR 13
K N+GS + K +SE ++S N D SAD +T+ +E ++
Sbjct: 2 KGSHPNAGSLLEPLHKLNPFSENSTSGHRKNASDHSADGETRPIAIEMKDSK 53
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 2.7
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 252 TVEREKSESNKKSREFE-NKEAESSTYRDKNRSVNS-GSERKSSGKDEEYSEQNSSNKSF 79
T S+S+ S + N + +S S NS SE +S KDE+ S+ + +
Sbjct: 302 TSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKR 361
Query: 78 NDGDASADYQTKSKKVEK 25
D + TKS + K
Sbjct: 362 KHEDDESSTSTKSSRTTK 379
Score = 25.0 bits (52), Expect = 6.3
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 264 EERLTVEREKSES-NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 88
EE +V+ E S + KS + ++++ ESST +R+ + R +++ +
Sbjct: 341 EESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFTRVGDPSQWDFASPALRD 400
Query: 87 KSFNDGDASADYQTKSKK 34
SFN D DY T + +
Sbjct: 401 NSFNFED---DYGTLANR 415
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 240 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 82
E S+++ +FEN+E++ ++ + + K+ K E EQ S K+
Sbjct: 714 EASQNDVSEDDFENEESDDDKIFEQQTKIE--DDVKNENKTEPVEEQKSEEKN 764
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 216 SREFENKEAESSTYRDKN--RSVNSGSERKSSGKD 118
++EFENK + ++T +D R N G+ R S D
Sbjct: 520 TKEFENKFSNANTAKDDEPARQTNKGTTRISRSSD 554
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = -2
Query: 141 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKK 1
E S ++ + + N++F+DG + +T ++EK D +
Sbjct: 180 ENSSEQVSSSFNSRVAHNRNFSDGPIVTNLETDQPRIEKKLTIDSSR 226
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -2
Query: 204 ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKS 40
+ K A S KNR S + + + S Q+S S GD++ D +KS
Sbjct: 34 KGKSALRSALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKS 88
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 3.6
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 85
EE L E +++ E E+ A D + +K KDE E+ +S K
Sbjct: 143 EEDLVETVSGDEESEEESESEDNSASEEDELD-SAPAKKAQVKKKRTKDESEQEEAASPK 201
Query: 84 SFNDGDASADYQTKSKKVEKNSARDKK 4
N TK +KVE ++KK
Sbjct: 202 KNN---------TKKQKVEGTPVKEKK 219
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQNSS 91
ER S SN+K E+ ST+ + R+++ DE+ + EQ +S
Sbjct: 929 ERAHSYSNRKQASSESSPESQSTHYNDYEGTEDNIVRQTTTVDEDGHQEQTTS 981
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 25.8 bits (54), Expect = 3.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 123 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDK 7
+D S SS K+F S KKVE+N A D+
Sbjct: 595 RDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDR 633
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = -2
Query: 237 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN---SSNKSFNDGD 67
KSE +K + N+E + + E D E E+N N S
Sbjct: 3 KSELKRKKHQSGNEEVKEKRQKPLKNDKKIAEELPQDEDDYEQEEENEDADQNTSVESES 62
Query: 66 ASADYQTKSKKVEKN 22
D + + ++V+K+
Sbjct: 63 EELDNENEDERVQKS 77
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEAESST-----YRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 85
VE+++S ++ S ++ + + ++ Y D + S +S E++S K E+Y + + S+K
Sbjct: 256 VEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKEKQS--KIEKYMKSDKSSK 313
Query: 84 SF 79
+F
Sbjct: 314 NF 315
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 25.8 bits (54), Expect = 3.6
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = -2
Query: 261 ERLTVEREKSESNKKSR----EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNS 94
+RL ER S + ++ F++ ++ + DK ++ +D E+N
Sbjct: 72 QRLPGERLSEFSQRVNKAIPVSFKSGPSKIDEFTDKKEKKKIAKRKEKRERDWNEIEENF 131
Query: 93 SNKSFNDGDASADYQTKSKKVEKNS 19
+K++ Q +S+K KNS
Sbjct: 132 EDKTWEADTTGQFIQIESRKKRKNS 156
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -2
Query: 222 KKSREFENK-EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 46
++ E E+ ++E T +D++ SVN E+ K++ ++ +S ++ + +
Sbjct: 70 QRKEELESHVDSEIETSKDES-SVNKVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEK 128
Query: 45 KSKKVEKNSARDKK 4
SKK + + A +++
Sbjct: 129 VSKKPKVSEAHNEE 142
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 3.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 186 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 46
SS +RS S S++ YSE+NSSN G S D T
Sbjct: 166 SSQQPPNDRSTLSSSQKAKRPLKRSYSEKNSSNAE-PSGSRSGDRGT 211
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 3.6
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -2
Query: 258 RLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 88
R T +E S + + + E + D+N +V+ E SS + SE+N +
Sbjct: 72 RKTSRQELLNSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDD 128
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKEA-ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 73
V + K E ++ E A + ++++ +V E K KD++ SSNK+ +
Sbjct: 318 VHKSKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQKKEGITSSNKNDDS 377
Query: 72 GD 67
G+
Sbjct: 378 GN 379
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 288 EDRQA*WLEERLTVERE-KSESNKKSREFENKEAESSTYRDKNRSVNSGSER 136
+DR W EE L ++E K+ + ++ +K++ SST + + V + +R
Sbjct: 53 QDRILQWTEENLKTQKELKNAAISTRQKPTSKKSASSTSKHDSTGVKTSGKR 104
>SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 143
Score = 25.4 bits (53), Expect = 4.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 305 WFLSRNIYRQYPFLYFC 355
W S+ +YR+Y LYFC
Sbjct: 53 WENSKLVYRRYAGLYFC 69
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 4.8
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -2
Query: 258 RLTVEREKSE--SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQNSSN 88
+L ++ E+S+ S + + + ++S D+N + + SE K DEE SE S
Sbjct: 736 QLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIAHSE 795
Query: 87 KSFND 73
F+D
Sbjct: 796 DEFDD 800
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 4.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 117 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKK 1
EE +E S N + + +DY+ KK +K KKK
Sbjct: 411 EELTEITSFNWETLEEQSQSDYEIDKKKKKKKKNNKKKK 449
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 204 ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 64
E++E E S + R + + +DEE S+ S F+DG+A
Sbjct: 373 EDEELEDSEDEEFARQQLLSRKEEEEEEDEEASDFEDSFADFSDGEA 419
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 25.4 bits (53), Expect = 4.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -2
Query: 174 RDKNRSVNSGSERKSSGKDE-EYSEQNSSNKSFN---DGDASADYQTKSKKVE 28
R +RS N GS R +G+ YS S+ + N + DAS + + E
Sbjct: 162 RKSSRSRNDGSRRNGNGRRRGNYSSHGSNKRQTNYSREKDASRSIDSSNPSAE 214
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 4.8
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -2
Query: 252 TVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 85
T E E E +KS E + + + +R++ G++ SG D++YS + +N+
Sbjct: 39 TKENEGYEELEKSGEAGAERTKENPFREE-----PGADFDRSGSDQQYSAEAEANQ 89
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 243 REKSESNKKSREFE-NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
R+K +S+ + + ++ + S+Y S S G++E+YS S
Sbjct: 88 RKKEQSDVRGGDTSYSRRHDDSSYSSNKYSTGGNDSYSSGGRNEDYSTSGGS 139
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 358 VTKIEERILTINIPRQEPINHQKRRQASVMARRAAHSRKGK 236
+T I ER+ ++ + +QE IN K+R + H+ +G+
Sbjct: 278 LTSIRERLESLILEKQEEINFWKQR-CRALETEKIHNHQGQ 317
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.0 bits (52), Expect = 6.3
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = -2
Query: 264 EERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-SERKSSGKDEEYSEQNSSN 88
EER + R+ + + KS + ++ + D N S +S S + + + + N
Sbjct: 953 EERANLLRKAKDPSPKSASESSSFYQNGSDIDDNDSNSSNTSNHTTENANAQQRKLEDLN 1012
Query: 87 KSFND--GDASADYQT--KSKKVEKNSARDK 7
+SF D G + + K+ V++++AR+K
Sbjct: 1013 RSFEDFLGSRPTNNSSFLKNVSVDEDTAREK 1043
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -2
Query: 195 EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNS 19
+ ++ Y+D S S S + DEE E + N ++GD + + + E S
Sbjct: 226 DINNNEYKDDESSSGSESYERDEDVDEEEEEDDDENN--DEGDDEDENENDELRSENGS 282
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 25.0 bits (52), Expect = 6.3
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -2
Query: 249 VEREKSESNKKSREFENKE-AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 73
+ R K + EF E +ESS + + S E EE +E+NS+ +
Sbjct: 659 INRPKFVGQQTLEEFYASETSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTPDEDTE 718
Query: 72 GDASADYQTKS 40
+ ++ TKS
Sbjct: 719 NNNTSSISTKS 729
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.0 bits (52), Expect = 6.3
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = -2
Query: 267 LEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 88
+E + +E++K KKS + + + ESS K + +KS K EE SE S
Sbjct: 445 VEMDIVIEKKK----KKSSKLKEADGESSKKEKKEK--KDKKHKKSKRKSEE-SEDGESP 497
Query: 87 KSFNDGDASAD 55
K S D
Sbjct: 498 KKKKKSKKSKD 508
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 6.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 246 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 85
EREK ESN S + E+ + ++T S N+ S+ + ++ Y + S K
Sbjct: 45 EREKVESNPNSSDEEDLTSTNNT----RSSDNTTSDTEDDSGEDSYQVEWESGK 94
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 6.3
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -2
Query: 324 IFRDRNQ*IIRNEDRQA*WLEERL-TVEREKSESNKKSREFENKEAESSTYRDKNRSVNS 148
+ R+ ++ N +R+ L + +EREK E++K+ + KEAE ++ R +
Sbjct: 407 VTRESQPEVLDNLERKLRQLRVEIRALEREKDEASKERLKAARKEAEQ--VEEETRPIRE 464
Query: 147 GSE-RKSSGKD 118
E KS G +
Sbjct: 465 KYELEKSRGSE 475
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/58 (20%), Positives = 25/58 (43%)
Frame = -2
Query: 174 RDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKK 1
+ R + +RK ++ S +++ ++ AS DY+ K+ N D +K
Sbjct: 24 KSSRRWTDRARDRKRQKRNSNESSKSTVKRNSGTNGASTDYKNSQKEKVINPVFDPRK 81
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -2
Query: 261 ERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 97
E L K++ K ++ ++KE S + KN+ + S +E + +DE +E +
Sbjct: 21 EALLYLMNKNKKRKPEKK-DDKEKSSKKVQKKNKVIESLNEMEVEMEDENENEND 74
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 168 KNRSVNSGSERKSSGKDEEYSEQNSSNKSF-NDGDASADYQTKSKKVEKNSA 16
+ +SV + + G+D++ SEQ ++ + + +D D D +S + + SA
Sbjct: 216 EQKSVLPNAVKNIDGQDDDSSEQTAAFEEYDDDDDDDVDDNEQSNSMIETSA 267
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 107 VNRTPVINPLTTAMHRLTTKPNLRRLKRIL 18
V++ P + L ++R P++RRLKR++
Sbjct: 796 VDQFPHLRTLYMDLNRFNRPPDIRRLKRLV 825
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 270 WLEERLTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 91
+LE++ T K+ K + +NK + KN + NS + RK++ EYS
Sbjct: 188 FLEDKRTASYGKTH---KRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFL 244
Query: 90 N 88
N
Sbjct: 245 N 245
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 2 FFLSLAEFFSTFLD 43
FFL ++FF+TFLD
Sbjct: 434 FFLDQSDFFTTFLD 447
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,426,357
Number of Sequences: 5004
Number of extensions: 22491
Number of successful extensions: 211
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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