Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0483.Seq
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 33 0.11
SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08) 33 0.19
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 31 0.44
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 31 0.59
SB_15380| Best HMM Match : RA (HMM E-Value=0.11) 31 0.78
SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 1.8
SB_46881| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79) 28 4.1
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08) 28 4.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11) 28 4.1
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 28 4.1
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_24372| Best HMM Match : Ribosomal_L24e (HMM E-Value=8.5e-40) 28 5.5
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 27 7.2
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_45244| Best HMM Match : Protamine_P2 (HMM E-Value=4.5) 27 7.2
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_37878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 27 7.2
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 27 7.2
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066) 27 9.6
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 27 9.6
SB_44135| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 9.6
SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002) 27 9.6
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_4928| Best HMM Match : DUF590 (HMM E-Value=0) 27 9.6
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQRE--KERVWKNQKKGTASSRLSPS 61
+P+E+ ++E +EKK + +KT + + +P N +++ RV + Q + R +P
Sbjct: 692 LPTEKKKKEKREKKERKREKKTRRARTPVEEPENFEKDVPLPRVHEEQDQVEKEHRRTPD 751
Query: 60 RWVNP 46
P
Sbjct: 752 GTQEP 756
>SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)
Length = 1188
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = -1
Query: 474 TKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQE 352
+K++E+ I+++K EG+T + E + + +N EE+ S +Q+
Sbjct: 417 SKEQELAIAVAKVEGMTQQLEEQRQNCRKNGLEEKYSNNQK 457
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 32.7 bits (71), Expect = 0.19
Identities = 28/141 (19%), Positives = 57/141 (40%)
Frame = -1
Query: 513 TNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDX 334
T+E + + KD E + K E+E + + +R E EER E +E +
Sbjct: 412 TDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEEERKQREE 471
Query: 333 XXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKR 154
+++ ++ + ER +E +EKK++ + + +G+R
Sbjct: 472 EEKKREEEERKQREEEERKQKEKEEEKKRKE----EERKHKEEEEKKTEESYDDSWRGRR 527
Query: 153 TTADPPNIQREKERVWKNQKK 91
++E+ER + +KK
Sbjct: 528 ARRKAEEERKERERRERLEKK 548
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -1
Query: 219 NQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 61
N+ + K KK K +M+K +K ++ T DPP + R K R + G+ +S S
Sbjct: 1089 NKSKKKSKKDKKSMKKASKHRKETGDPPML-RAKIRGIGSPVSGSFQRTISES 1140
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = -1
Query: 201 EKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 61
+K +K +KT+K ++ PN +R++++ K +KK ASS++ P+
Sbjct: 367 KKGTKRGKKKTSKDATEESEAPNKKRKEKK--KKKKKKKASSKIEPT 411
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKK 91
S++ +E K++K K M+K K K +T + ++EKE+ K +K+
Sbjct: 129 SDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKE 175
>SB_15380| Best HMM Match : RA (HMM E-Value=0.11)
Length = 2124
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 471 KDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
K+KE ++ S+ EG E EG K++ + + E E +ED+ SD
Sbjct: 1174 KEKEGEVDESEKEGWKTEGEGEKTEEEWKKEVEGQREEKEDDKSD 1218
>SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -1
Query: 522 KKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDND 343
KK + ++K K ++ K K K+ K EG E+EG + + ++ E EE + +ED
Sbjct: 114 KKKKKKKKKKKKKKKINKKKINKVE-EKEEGEEEEEEG-EEEEEKEEEEEEDKQEEEDKQ 171
Query: 342 SD 337
+
Sbjct: 172 EE 173
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -1
Query: 501 RRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
++K K + K K+ KI+ K + ++EG + + + E EE+ E +ED +
Sbjct: 113 KKKKKKKKKKKKKKKKINKKKINKVEEKEEGEEEEEEGEEEEEKEEEEEEDKQEE 167
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTA 82
V E+ E KEK A R + +GK+ Q +K K +KK A
Sbjct: 926 VADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQEDKTDAEKEKKKPKA 976
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -1
Query: 222 RNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 73
RN + KE+ R ++ +R+ ++ P++++ + K+Q+K + SR
Sbjct: 248 RNSQRHKERSRYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQRKSRSRSR 297
>SB_46881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 261 KFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTA 82
+ ART + +RNQ E E+K + +RK K ++ + K R + ++KG
Sbjct: 28 RLKFARTSVQNRQRNQAEYSERKER-KVRKVRKERKVRKGRKVRKGRKVRKGRKERKGRK 86
Query: 81 SSRLSPSR 58
++ R
Sbjct: 87 VRKVRKER 94
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVN 49
S++ +E+K+K + + + + T+ P K+ + K +SSR+ S+ V+
Sbjct: 1854 SDKRDKEIKDKSHFMSSSEVSDEEMTSIGRPESITTKKSLSSTDKNTNSSSRIDMSQLVD 1913
Query: 48 P 46
P
Sbjct: 1914 P 1914
>SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79)
Length = 364
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 486 KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
K + KD+ + S S+ T+++ G+KS + E EE S+ +D+D D
Sbjct: 299 KCKCAKDRCVTNSASQ----TVQEVGFKSGNNDEEDEEEESDDDDDDDDD 344
>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
Length = 416
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -1
Query: 276 RRTH-DKFSLARTXL-VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 109
+RTH D AR V S + E KE +SK+ RKT+ K+T + RE+ +V
Sbjct: 296 KRTHYDSLFFARVVREVVSSLSVAEEKELQSKSFYRKTSTMKQTRKEYERHGRERRKV 353
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVN 49
+ + +R KEK SK + +GK T PP++ ++ + Q T +S PS
Sbjct: 3169 ASKRKRNTKEKNSKLPLPSVPEGKILTDIPPSLPSTASQIGE-QVVNTRTSSNEPSLPEA 3227
Query: 48 PA 43
PA
Sbjct: 3228 PA 3229
>SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11)
Length = 717
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 247 KNGISAERTKSKRGERKEVEGEYEKDYER 161
+ + R + +R +R+E EG+Y +DY R
Sbjct: 347 RRAVEKRRKRRQRKQRQEGEGDYGEDYNR 375
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN 100
+ E ++E KEK+ + +K+ K K A P + K+ W N
Sbjct: 269 IREEWEEQERKEKERQERKQKSIKEKEVIAWPWKVGHSKDEPWHN 313
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 471 KDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDN 346
K+++ K +S+ + + E K YD EY E+GS H E N
Sbjct: 897 KERDCKEHLSELDEWREKYESLKLKYDELEY-EKGSLHNEKN 937
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 216 QREVKEKKSKANMRKTTKGK--RTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 43
QR K + + NMR+ + G ++ AD P QR ++ K+ +KG +++ + V PA
Sbjct: 247 QRAPKRRNWRKNMRRPSSGSIGQSMADSP--QRGTPQLSKSDRKGEKTAKGKEIKRVIPA 304
Query: 42 *RSR 31
S+
Sbjct: 305 GESK 308
>SB_24372| Best HMM Match : Ribosomal_L24e (HMM E-Value=8.5e-40)
Length = 154
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 252 LARTXLVPSERN-QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 76
LA+ P R QRE + +K R K+ T P QR+K + KN K+ A
Sbjct: 91 LAKRNQKPEVRKAQREQAIRAAKEKQRAKASTKKPTTAQPAAQRQKAQ--KNVKQMAAKP 148
Query: 75 RLSPSR 58
R+ R
Sbjct: 149 RVGGKR 154
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 438 AEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
AEG + E+E D D ++ +E E ED+D D
Sbjct: 159 AEGSSEEEEMDDEDEDHDDDDEEEEEEDEDDDGD 192
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 231 PSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQRE-KERVWKNQKKGTASSR 73
P E+N++E ++ ++ RKT+K K + + Q E K+ K Q + +SR
Sbjct: 260 PQEKNKQEQDKQAARQASRKTSKTKTSKPQEKDKQDEDKQAARKRQVRTRQASR 313
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -1
Query: 501 RRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
RR+ + E+ +++E + + E E+E + + + E EE E +ED+D D
Sbjct: 127 RREEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDDD 181
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -1
Query: 276 RRTHDKFSLARTXLVPSERN--QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWK 103
+R H+K T P + ++ KEKKSK KT + AD + E+ K
Sbjct: 353 KRKHEKSDEEETAATPEVESPPKKHKKEKKSKKEKTKTEESDE-EADISAVLENGEKKKK 411
Query: 102 NQKKGTASS 76
+KK A +
Sbjct: 412 KKKKKKAKT 420
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 225 ERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 109
++ +E KEK+ + K K K+ + +QR+KER+
Sbjct: 353 KQKHQEKKEKERQREKEKLEKEKQKELERKELQRQKERM 391
>SB_45244| Best HMM Match : Protamine_P2 (HMM E-Value=4.5)
Length = 82
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 270 THDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRT 151
TH FSL R +RN++ +++K K N ++ K R+
Sbjct: 34 THRWFSLKRKRKRNRKRNRKRNRKRKRKRNRKRNRKRNRS 73
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 91
VP R RE EKK K +K K K+ ++ K+ KN+KK
Sbjct: 7 VPMRREYRE--EKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKK 52
>SB_37878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 468 DKEIKISISKAEGLTL-EKEGYKSDYDRNEYEERGSEHQEDNDSD 337
+KE + K + LTL EK Y ++ + N ++ + +D+D D
Sbjct: 3 EKEPSLCQGKVKNLTLIEKSTYNNNNNNNNNDDDDDDDDDDDDDD 47
>SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 474 TKDKEIKISISKAE-GLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
+K++EI+ ++KA +KE + +R+E++ G EH+ DS+
Sbjct: 173 SKEREIEEKLAKARLEEARQKEERERHNERDEWKRAGGEHRGRRDSN 219
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 252 LARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 73
+A ++ S+ + R++ + N++ + PN +E V+K+ KG SS
Sbjct: 969 VAVNNVLTSQNHARDMLNNNN-INLKNADNASLLRSLSPNGTIGQEPVFKSSSKGDLSSE 1027
Query: 72 LSPS 61
LSPS
Sbjct: 1028 LSPS 1031
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRW 55
VP RN+ E ++S KTT + A+ + E++ V N K+ S ++ R
Sbjct: 522 VPRSRNKEETLNQQSYKFSYKTTPQESILANGSAERMEEKSVAHNPKRAQGSEEIATVRT 581
Query: 54 VNP 46
P
Sbjct: 582 PKP 584
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 384 EYEERGSEHQEDNDSD 337
EYEER EH+ED D
Sbjct: 271 EYEERNDEHEEDRHED 286
>SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066)
Length = 716
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 267 HDKFSLARTXLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 130
+D F +P E + +K+ S NMRK T G + T+D +
Sbjct: 104 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 151
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 480 ELTKDKE-IKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
EL K K+ I S+ + +G +KE ++ D +E E+ + ED+D +
Sbjct: 166 ELDKVKQNIYQSLFEFKGNLFDKEAEEASSDEDEEEDSDEDDDEDDDDE 214
>SB_44135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 312 IRNLCCMSRRCRYPPGVQIRVLHIHYDRNQTCILLFL 422
IRN C ++R CR P ++ L + +Q CIL+F+
Sbjct: 5 IRNTC-INRECRNFPLYRVSQLTLLSRLSQECILMFI 40
>SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1359
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 267 HDKFSLARTXLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 130
+D F +P E + +K+ S NMRK T G + T+D +
Sbjct: 1109 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 1156
>SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002)
Length = 1725
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 267 HDKFSLARTXLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 130
+D F +P E + +K+ S NMRK T G + T+D +
Sbjct: 1180 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 1227
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -1
Query: 225 ERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSR 58
ER +RE +E + + R+ + +R + +RE+ER W+ +++ + R R
Sbjct: 1132 ERRRRE-EEDRLREEARRREEERRLEDERWEREREEERRWEEERRRRSMGRYPDDR 1186
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 423 LEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
L GY +DYD ++ G++ D+D D
Sbjct: 2095 LVNNGYGNDYDNGGGDDDGNDDDNDDDDD 2123
>SB_4928| Best HMM Match : DUF590 (HMM E-Value=0)
Length = 897
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -1
Query: 441 KAEGLTLEKEGYKSDY----DRNEYEERGSEHQEDNDSD 337
K EGLT GYK DY +R E EE +E + +D
Sbjct: 36 KQEGLTFNNGGYKIDYVLVFERCEEEESKNEDSKAKAAD 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,365,663
Number of Sequences: 59808
Number of extensions: 169933
Number of successful extensions: 1136
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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