Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0483.Seq
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb... 31 2.5
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 30 5.8
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 30 5.8
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 30 5.8
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 30 5.8
M16660-1|AAA36025.1| 724|Homo sapiens protein ( Human 90-kDa he... 29 7.6
J04988-1|AAA36026.1| 724|Homo sapiens protein ( Human 90 kD hea... 29 7.6
DQ314872-1|ABC40731.1| 724|Homo sapiens heat shock 90kDa protei... 29 7.6
BC068474-1|AAH68474.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
BC016753-1|AAH16753.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
BC014485-1|AAH14485.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
BC012807-1|AAH12807.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
BC009206-1|AAH09206.2| 650|Homo sapiens HSP90AB1 protein protein. 29 7.6
BC007327-1|AAH07327.1| 351|Homo sapiens HSP90AB1 protein protein. 29 7.6
BC004928-1|AAH04928.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
AY359878-1|AAQ63401.1| 724|Homo sapiens heat shock 90kDa protei... 29 7.6
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 29 7.6
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 29 7.6
AL139392-3|CAI20095.1| 724|Homo sapiens heat shock protein 90kD... 29 7.6
AL136543-1|CAB66478.1| 737|Homo sapiens hypothetical protein pr... 29 7.6
AF275719-1|AAF82792.1| 632|Homo sapiens chaperone protein HSP90... 29 7.6
>AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb
protein.
Length = 422
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEK-EGYKSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS KAE EK E K D ++ + E+ GS+ ++D+ D
Sbjct: 180 LEKEREKEISDGKAEEEKGEKEEENKDDEEKPKIEDVGSDEEDDSGKD 227
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = -1
Query: 528 EIKKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQED 349
E ++ + R K + E ++KE + +K EK+ K D +++ ER EH++D
Sbjct: 270 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK-DKEKDREREREKEHEKD 328
Query: 348 NDSD-XXXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRK 172
D + E+R DK S + R R ++ + R
Sbjct: 329 RDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRS 388
Query: 171 TTKGKRTT 148
+++ RT+
Sbjct: 389 SSRSPRTS 396
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = -1
Query: 528 EIKKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQED 349
E ++ + R K + E ++KE + +K EK+ K D +++ ER EH++D
Sbjct: 270 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK-DKEKDREREREKEHEKD 328
Query: 348 NDSD-XXXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRK 172
D + E+R DK S + R R ++ + R
Sbjct: 329 RDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRS 388
Query: 171 TTKGKRTT 148
+++ RT+
Sbjct: 389 SSRSPRTS 396
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = -1
Query: 528 EIKKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQED 349
E ++ + R K + E ++KE + +K EK+ K D +++ ER EH++D
Sbjct: 270 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK-DKEKDREREREKEHEKD 328
Query: 348 NDSD-XXXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRK 172
D + E+R DK S + R R ++ + R
Sbjct: 329 RDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRS 388
Query: 171 TTKGKRTT 148
+++ RT+
Sbjct: 389 SSRSPRTS 396
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = -1
Query: 528 EIKKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQED 349
E ++ + R K + E ++KE + +K EK+ K D +++ ER EH++D
Sbjct: 61 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK-DKEKDREREREKEHEKD 119
Query: 348 NDSD-XXXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRK 172
D + E+R DK S + R R ++ + R
Sbjct: 120 RDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRS 179
Query: 171 TTKGKRTT 148
+++ RT+
Sbjct: 180 SSRSPRTS 187
>M16660-1|AAA36025.1| 724|Homo sapiens protein ( Human 90-kDa
heat-shock protein gene, cDNA, complete cds. ).
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>J04988-1|AAA36026.1| 724|Homo sapiens protein ( Human 90 kD heat
shock protein gene, complete cds. ).
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>DQ314872-1|ABC40731.1| 724|Homo sapiens heat shock 90kDa protein
1, beta protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC068474-1|AAH68474.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class B member 1 protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC016753-1|AAH16753.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class B member 1 protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC014485-1|AAH14485.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class B member 1 protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC012807-1|AAH12807.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class B member 1 protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC009206-1|AAH09206.2| 650|Homo sapiens HSP90AB1 protein protein.
Length = 650
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 143 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 190
>BC007327-1|AAH07327.1| 351|Homo sapiens HSP90AB1 protein protein.
Length = 351
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>BC004928-1|AAH04928.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class B member 1 protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>AY359878-1|AAQ63401.1| 724|Homo sapiens heat shock 90kDa protein 1
beta protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 225 ERNQREVKEK-KSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKKGTASSRLSPSRWV 52
E+N ++ KEK K++ R +K + RT + P+ R + R + + R SP R
Sbjct: 262 EKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRR-- 319
Query: 51 NPA*RSRIIQNRIP 10
P+ R R R+P
Sbjct: 320 RPSPRRRTPPRRMP 333
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 225 ERNQREVKEK-KSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKKGTASSRLSPSRWV 52
E+N ++ KEK K++ R +K + RT + P+ R + R + + R SP R
Sbjct: 262 EKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRR-- 319
Query: 51 NPA*RSRIIQNRIP 10
P+ R R R+P
Sbjct: 320 RPSPRRRTPPRRMP 333
>AL139392-3|CAI20095.1| 724|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), classn complex) 1B (SPRL1B) pseudog
protein.
Length = 724
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>AL136543-1|CAB66478.1| 737|Homo sapiens hypothetical protein
protein.
Length = 737
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 217 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 264
>AF275719-1|AAF82792.1| 632|Homo sapiens chaperone protein HSP90
beta protein.
Length = 632
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 477 LTKDKEIKISISKAEGLTLEKEGY-KSDYDRNEYEERGSEHQEDNDSD 337
L K++E +IS +AE EKE K D ++ + E+ GS+ ++D+ D
Sbjct: 125 LEKEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKD 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,830,831
Number of Sequences: 237096
Number of extensions: 711394
Number of successful extensions: 3515
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3503
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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