Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0483.Seq
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 33 0.096
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 32 0.22
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 32 0.22
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 31 0.67
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 31 0.67
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 30 0.89
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 30 1.2
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 30 1.2
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 29 1.6
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 1.6
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 28 3.6
Z82076-7|CAB04933.2| 291|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 28 4.8
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 28 4.8
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 28 4.8
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 28 4.8
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 28 4.8
AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine re... 28 4.8
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 4.8
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 28 4.8
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 27 6.3
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 6.3
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 27 6.3
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 27 8.3
U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical pr... 27 8.3
U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical pr... 27 8.3
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 27 8.3
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 27 8.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 8.3
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = -1
Query: 420 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSLART 241
+K+G K + ++ + E++ + +ED+ D E + DK +
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKD 140
Query: 240 XLVPSERNQREVKEKKSK--ANMRKTTKGKRTTADPPNIQREKERVWKNQKK 91
++++++ K KKSK + +K+ K KR D + +K+ K K
Sbjct: 141 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKDDK 192
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 61
SE ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 156 SEESEEERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
Score = 30.3 bits (65), Expect = 0.89
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 276 RRTHDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 97
++ +K RT + + E +E+KSK +KT K+ T+ + + E+ER K
Sbjct: 112 QKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKS 168
Query: 96 KKGTASS 76
KK S
Sbjct: 169 KKNKEKS 175
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 61
SE ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 156 SEESEEERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
Score = 30.3 bits (65), Expect = 0.89
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 276 RRTHDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 97
++ +K RT + + E +E+KSK +KT K+ T+ + + E+ER K
Sbjct: 112 QKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKS 168
Query: 96 KKGTASS 76
KK S
Sbjct: 169 KKNKEKS 175
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 471 KDKEIKIS--ISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDND 343
++K++KIS K +GL + +EG D ++ ++ S H ED+D
Sbjct: 295 REKDLKISELSEKLQGLLINQEGEADDTMIDQDDDNKSTHSEDSD 339
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 471 KDKEIKIS--ISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDND 343
++K++KIS K +GL + +EG D ++ ++ S H ED+D
Sbjct: 295 REKDLKISELSEKLQGLLINQEGEADDTMIDQDDDNKSTHSEDSD 339
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = -1
Query: 411 GYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSLARTXLV 232
G + D + EY+ E QE+ + D RR+ K + V
Sbjct: 606 GQRDDQEEEEYDAEEPEDQEEEEED--EYQAEEYTPTPVTRRSSSRRSGAKND--ESEEV 661
Query: 231 PSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 109
+++++E EK K R+ +K K+ ++E+ER+
Sbjct: 662 SVKKDKKEKMEKVEKDEKRRNSKSKKDKISKEKKKKERERI 702
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -1
Query: 273 RTHDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 94
R H K + T SE VK K K+ KTT +TT +P + ++ +++ +++K
Sbjct: 70 RRHLKSTTPATDDDDSEEETTTVKSHKKKST--KTTDAPKTTEEPASTKKSEKKKTESKK 127
Query: 93 KGTASSRLSPS 61
++ +P+
Sbjct: 128 AVKTTTTAAPA 138
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTAD-PPN 133
VPS+R + E KEK+ K R+ +GK+ D PN
Sbjct: 520 VPSKRRKGEPKEKREKKEKREKKEGKKGKKDKDPN 554
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 252 LARTX-LVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 76
L RT L SE ++++ K K ++ ++ +R+ PN ++EK R + G++S
Sbjct: 4 LTRTKTLSASESSRKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVR----NRSGSSSK 59
Query: 75 RLSPSRWVNP 46
+ + VNP
Sbjct: 60 KEKKNSLVNP 69
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/110 (20%), Positives = 45/110 (40%)
Frame = -1
Query: 420 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSLART 241
+K+G K + ++ + E++ + +ED+ D E + DK +
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKD-EKK 139
Query: 240 XLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 91
E+ ++ K KKS + +K+ K KR D + +K+ K K
Sbjct: 140 DEKKDEKKEKSKKSKKS-SKSKKSKKSKREKKDEDKKEDDKKEDDKKDDK 188
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -1
Query: 231 PSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQ-----REKERVWKNQKKGTASSRLS 67
P E +Q+ K+S +N R ++ D N + REK+R K +++ +SSR S
Sbjct: 129 PPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKKERRRKRSSSRSS 188
Query: 66 PS 61
S
Sbjct: 189 SS 190
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -1
Query: 231 PSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQ-----REKERVWKNQKKGTASSRLS 67
P E +Q+ K+S +N R ++ D N + REK+R K +++ +SSR S
Sbjct: 129 PPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKKERRRKRSSSRSS 188
Query: 66 PS 61
S
Sbjct: 189 SS 190
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 216 QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 94
+R+ KEK K M T K K+ D ++EKER+ K +K
Sbjct: 235 ERKEKEKVEKNKMEMTEKIKKKDEDE-KAKKEKERIDKEEK 274
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/95 (24%), Positives = 41/95 (43%)
Frame = -1
Query: 441 KAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHD 262
K + +E+EG + + +R+E E GSE +ED++ + + +
Sbjct: 188 KPKNQNVEEEGSEDELERSEGSE-GSEEEEDDEDERLKFREEISKMPLGKVKEMKEKLGI 246
Query: 261 KFSLARTXLVPSERNQREVKEKKSKANMRKTTKGK 157
K +T SE +++ EKK A K KG+
Sbjct: 247 KL-FNKTYFGTSEADKKRADEKKKAA--EKADKGQ 278
>Z82076-7|CAB04933.2| 291|Caenorhabditis elegans Hypothetical
protein W07G1.1 protein.
Length = 291
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 247 KNGISAERTKSKRGERKEVEGEYEKDYER 161
K+ ++ R S+RG R++ E E+D ER
Sbjct: 219 KHSVAPSRASSRRGSRRDEEKREEEDEER 247
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 115
V + NQ+ VKE+ RKT + + A+ ++ EKE
Sbjct: 358 VKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKE 397
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 444 SKAE-GLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
S+A+ G +K D D EY+++ S+ +E+N+++
Sbjct: 595 SRAQRGAEEKKRNQSDDDDEKEYDDKDSDEEEENEAE 631
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 112
+PS N+R KE++ + R+ + ADPP I + ER
Sbjct: 706 LPSYINRRMEKEREREIEYRRDREYSMPPADPPVITEKYER 746
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 112
+PS N+R KE++ + R+ + ADPP I + ER
Sbjct: 842 LPSYINRRMEKEREREIEYRRDREYSMPPADPPVITEKYER 882
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform c protein.
Length = 1099
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKER 112
+PS N+R KE++ + R+ + ADPP I + ER
Sbjct: 937 LPSYINRRMEKEREREIEYRRDREYSMPPADPPVITEKYER 977
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 115
V + NQ+ VKE+ RKT + + A+ ++ EKE
Sbjct: 358 VKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKE 397
>AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine
receptor, class v protein4 protein.
Length = 321
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 94 LLIFPNSLFLSLNIRRIRRCSLSFRSLSHIR 186
L + N++FL + + RCS FR +H++
Sbjct: 96 LTVIKNAMFLGYTVVAVNRCSEIFRFRNHVK 126
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = -1
Query: 276 RRTH-DKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKR--------TTADPPNIQR 124
RR H ++ A E+ +RE++EK+ K N+ + K +R A +++
Sbjct: 309 RREHIERHRQAEARAKALEKEKRELEEKQKKENLERVEKERREHIERHRQAEARAKALEK 368
Query: 123 EKERVWKNQKK 91
EK + + QKK
Sbjct: 369 EKRELEEKQKK 379
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 528 EIKKXTNEXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEH-QE 352
E KK + RK K E +DKE K S S++ ++ DR+ +R + +
Sbjct: 861 ESKKSDEKSERKSEKKEKKRDKERKRSRSRSRDRDRDRSRRDRSRDRSRDRDRDRDRDRR 920
Query: 351 DNDSD 337
D D D
Sbjct: 921 DRDRD 925
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 468 DKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 337
+ E+ SI A+G T+ + K+D +RN YE S +++++ +
Sbjct: 481 NSEMSASIKNADG-TMSQVNVKNDTNRNTYEAEKSALEKNHEKN 523
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 253 IGKNGISAERTKSKRGERKEVEGEYEKDY 167
I KN T + GER++ EYEKDY
Sbjct: 154 IVKNSKFYNYTMNSNGEREKFGSEYEKDY 182
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 27.5 bits (58), Expect = 6.3
Identities = 28/124 (22%), Positives = 44/124 (35%)
Frame = -1
Query: 507 EXRRKI*KXELTKDKEIKISISKAEGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXX 328
E +K K + K++ K K E +KE K D ++ EE+ E +ED
Sbjct: 77 EKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDD 136
Query: 327 XXXXXXXXXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEKKSKANMRKTTKGKRTT 148
E++ K + E + E KE + K + +K T
Sbjct: 137 KKEDEKDDKKSGSKDAEKKEEKKEEEKKEE--KKEEKKEEKKEDEKKEDEKKEEPKPHIT 194
Query: 147 ADPP 136
DPP
Sbjct: 195 IDPP 198
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 480 ELTKDKEIKISISKAEGLTLEKEGYKSDYDR---NEYEERGSEHQEDNDSD 337
+ +KE ++S +G +E + K D R +E E+ GS+ +D+D D
Sbjct: 7 DAASNKEEDTTLSDDDGSDVEIKNSKKDRKRKLASESEKSGSDDDDDDDDD 57
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 480 ELTKDKEIKISISKAEGLTLEKEGYKSDYDR---NEYEERGSEHQEDNDSD 337
+ +KE ++S +G +E + K D R +E E+ GS+ +D+D D
Sbjct: 7 DAASNKEEDTTLSDDDGSDVEIKNSKKDRKRKLASESEKSGSDDDDDDDDD 57
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Frame = -1
Query: 420 EKEGYKSDYDRNEYEERGSEHQED---NDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSL 250
EK+ +++ ++NE E++ E +ED D +++ K
Sbjct: 65 EKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
Query: 249 ARTXLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREK---ERVWKNQKKGTAS 79
+ E K+K+ K + + K T D ++EK E+V ++ KK S
Sbjct: 125 KEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPKKDDKS 184
>U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical
protein B0261.1 protein.
Length = 779
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = -1
Query: 480 ELTKDKEIKISISKAEGLTL-EKEGYKSDYDRNEYEERGSEHQE-DNDSDXXXXXXXXXX 307
E ++K+ K KAE + E+ + +RN+ +E + +E + D+
Sbjct: 339 EEAQEKKAKGEYEKAEEKRIREQNRLQKATERNQAKELVKQAKELERDARNAAKLNMKAD 398
Query: 306 XXXXXXXXXERRTHDKFSLARTXLVPSERNQREVKEK---KSKANMRKTTKGKRTTADPP 136
E R +K +L L+ +E + ++ + K + K+ K +D
Sbjct: 399 KEARAQEKSETRQLEKTALKEARLMATEAKRIAMEARAIIKESRKLEKSKKADSVQSDSH 458
Query: 135 NIQREKERV 109
N++RE ER+
Sbjct: 459 NLEREAERI 467
>U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical
protein C16D9.4 protein.
Length = 409
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 321 LCCMSRRCRYPPGVQIRVLHIHYDRN 398
LC + ++C PPG Q+ DRN
Sbjct: 348 LCALDQKCMNPPGAQVYCRFPDNDRN 373
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADP 139
S +EVKEKK K + K +GK+ P
Sbjct: 1285 SVTKSKEVKEKKEKKKVEKKDEGKKKPGRP 1314
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADP 139
S +EVKEKK K + K +GK+ P
Sbjct: 1300 SVTKSKEVKEKKEKKKVEKKDEGKKKPGRP 1329
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADP 139
S +EVKEKK K + K +GK+ P
Sbjct: 17111 SVTKSKEVKEKKEKKKVEKKDEGKKKPGRP 17140
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 228 SERNQREVKEKKSKANMRKTTKGKRTTADP 139
S +EVKEKK K + K +GK+ P
Sbjct: 17126 SVTKSKEVKEKKEKKKVEKKDEGKKKPGRP 17155
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 234 VPSERNQREVKEKKSKANMRKTTKGKRTTADP 139
V + R REV EK S T G++ TA+P
Sbjct: 2076 VDARRFAREVSEKVSTGEWTMTLSGQKLTAEP 2107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,711,750
Number of Sequences: 27780
Number of extensions: 124078
Number of successful extensions: 903
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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