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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0481.Seq
         (429 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc...    30   0.13 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   0.93 
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos...    27   1.6  
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo...    27   1.6  
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi...    27   1.6  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    26   2.2  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    25   5.0  
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    25   5.0  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    24   8.7  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    24   8.7  

>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 150

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 146 NSLPP-HQAFPSPADRPPVIPTTXSARDRPPP 238
           N +PP  QA+  P   PP +P   ++ + PPP
Sbjct: 96  NPMPPMSQAYRPPPTEPPTVPAYETSSEFPPP 127


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.5 bits (58), Expect = 0.93
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 173  PSPADRPPVIPTTXSARDRPPPVSQPLYLNPS 268
            P P   PPV  ++  A   PPPV  P    PS
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPS 1075



 Score = 25.0 bits (52), Expect = 5.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 173  PSPADRPPVIPTTXSARDRPPPVSQPLYLNPS 268
            P P++ PPV   +      PPP + P    PS
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223


>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
           Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 953

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
           SL P  + P+    PP IPT  +     PPV++P
Sbjct: 360 SLTPLSSRPAHTSLPP-IPTVQTTSSNVPPVNRP 392


>SPBC800.09 |sum2||G2/M transition checkpoint protein
           Sum2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
 Frame = +2

Query: 14  SVPPAPLFARPNHHDHRFRME--QLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPAD 187
           S P  P +  P+      R E  Q VS+ F                N  PP+ A   PA 
Sbjct: 162 STPAVPYYGAPDQQQMGQRPEFAQNVSQGFAGQAPYNVRPGYGMPSNQKPPNFAPGMPAP 221

Query: 188 RPPVIPTTXSARDRPP 235
            P  +  + S +  PP
Sbjct: 222 GPTAVSASPSLQSMPP 237


>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
           Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 690

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
           SLP       P  +PPVIP     +  P  +  P++ +P
Sbjct: 169 SLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNHP 207


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
 Frame = +2

Query: 146 NSLPPHQAFPSPADRPPVIPTTXSA------RDRPPPVSQPLYLNPS 268
           +SLPP     +P   PP  P+  SA      +  PPP+SQ    N S
Sbjct: 169 SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTS 215



 Score = 25.4 bits (53), Expect = 3.8
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +2

Query: 149 SLPPHQAFP--SPADRPPVIPTTXSARDRPPPVSQP 250
           S PP  + P  SPA  PP+           PP +QP
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 146  NSLPPHQAFPSPADRPPVIPTTXSARDRP--PPVSQP 250
            ++ PP  + P+P   P  +P   SA   P  PP + P
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +2

Query: 155  PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ-PLYLNP 265
            PP  + P P   PP+     SA   P P S  P   NP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
           PP    P+PA  P  +P        PPP   P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
 Frame = +2

Query: 146 NSLPPHQAFPSPADRPPVIP-----TTXSARDRPPPVSQPLYLNPS 268
           +S PP +     A  PP IP     T  S  + PP    P+ +NP+
Sbjct: 238 SSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPP 238
           S+PP     +P   P V PT+ S+   PPP
Sbjct: 290 SIPPTGNSTTPVT-PTVPPTSTSSTSTPPP 318



 Score = 24.2 bits (50), Expect = 8.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPP 238
           S+PP     +P   P V PT+ S+   PPP
Sbjct: 344 SIPPTGNSTTPVT-PTVPPTSTSSTSTPPP 372


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,349,491
Number of Sequences: 5004
Number of extensions: 21624
Number of successful extensions: 86
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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