Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0481.Seq
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 32 0.19
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 32 0.19
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 31 0.44
At2g42200.2 68415.m05223 squamosa promoter-binding protein-like ... 31 0.44
At2g42200.1 68415.m05222 squamosa promoter-binding protein-like ... 31 0.44
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 30 0.77
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 30 0.77
At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ b... 29 1.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 1.0
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 26 1.1
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 29 1.3
At1g63570.1 68414.m07186 receptor-like protein kinase-related co... 29 1.3
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 29 1.3
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 1.8
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 1.8
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 29 1.8
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 29 1.8
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 2.3
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 28 2.3
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 3.1
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 3.1
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 28 3.1
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 28 3.1
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 27 4.1
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 27 4.1
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 27 4.1
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 4.1
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 27 5.4
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 27 5.4
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 5.4
At4g02340.1 68417.m00318 epoxide hydrolase, putative similar to ... 27 5.4
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 5.4
At1g63480.1 68414.m07178 DNA-binding family protein contains a A... 27 5.4
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 5.4
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 27 5.4
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 24 6.2
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 27 7.1
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 27 7.1
At4g34300.1 68417.m04875 glycine-rich protein similar to auxin r... 27 7.1
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 7.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 7.1
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 27 7.1
At2g35600.1 68415.m06030 expressed protein 27 7.1
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 27 7.1
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 26 9.4
At5g16500.1 68418.m01928 protein kinase family protein contains ... 26 9.4
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 26 9.4
At4g29240.1 68417.m04182 leucine-rich repeat family protein / ex... 26 9.4
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 26 9.4
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 26 9.4
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 26 9.4
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 26 9.4
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 26 9.4
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 26 9.4
At1g61080.1 68414.m06877 proline-rich family protein 26 9.4
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 26 9.4
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 31.9 bits (69), Expect = 0.19
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +2
Query: 20 PPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQA--FPSPADRP 193
PPA A P+ +Q + HGL+ N P Q FP
Sbjct: 246 PPASAAAPPSLTQQGLPPQQFIQPPASQHGLSPPSLQLPQLPNQFSPQQEPYFPPSGQSQ 305
Query: 194 PVIPTTXSARDRPPPVSQPLYLNP 265
P P T +PPP +Q L+ P
Sbjct: 306 P--PPTIQPPYQPPPPTQSLHQPP 327
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 31.9 bits (69), Expect = 0.19
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 20 PPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPV 199
PP+P + NH HR V+ Q HH PP ++ P P PP
Sbjct: 104 PPSP--SPDNHRHHRRTTTAAVAGQPPHHRRTTAAAGTTTIAGQPPPPES-PPPESLPPP 160
Query: 200 IPTTXS-ARDRPPPVS 244
P + S PPP S
Sbjct: 161 SPESPSPPSPEPPPPS 176
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 30.7 bits (66), Expect = 0.44
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 20 PPAPLFARPNHHDHRFRMEQLVS 88
PP+ + P HHDH+ ++E ++S
Sbjct: 125 PPSEVIDVPQHHDHKLKLEMVIS 147
>At2g42200.2 68415.m05223 squamosa promoter-binding protein-like 9
(SPL9) identical to squamosa promoter binding
protein-like 9 [Arabidopsis thaliana] GI:5931673;
contains Pfam profile PF03110: SBP domain
Length = 369
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 203 PTTXSARDRPPPVSQPLYLNPSWIF 277
P T + PP SQ YLNP W+F
Sbjct: 285 PMTVTMAQPPPAPSQHQYLNPPWVF 309
>At2g42200.1 68415.m05222 squamosa promoter-binding protein-like 9
(SPL9) identical to squamosa promoter binding
protein-like 9 [Arabidopsis thaliana] GI:5931673;
contains Pfam profile PF03110: SBP domain
Length = 375
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 203 PTTXSARDRPPPVSQPLYLNPSWIF 277
P T + PP SQ YLNP W+F
Sbjct: 285 PMTVTMAQPPPAPSQHQYLNPPWVF 309
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 29.9 bits (64), Expect = 0.77
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP A P PP + T + PPPVS P +P
Sbjct: 46 PPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASP 82
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPSWIFT 280
PP + P PA PP P ++ PPPV+ P P + T
Sbjct: 71 PPPVSSPPPASPPPATPPPVAS--PPPPVASPPPATPPPVAT 110
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPV-SQPLYLNP 265
PP P PA PP + PPPV + P NP
Sbjct: 33 PPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANP 70
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
S PP P PA+ PP + + A PPP + P +P
Sbjct: 57 SPPPVTTAPPPANPPPPVSSPPPA--SPPPATPPPVASP 93
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXS-ARDRPPPVSQP 250
PP A P P PP + T+ PPP + P
Sbjct: 39 PPPAATPPPVSAPPPVTTSPPPVTTAPPPANPP 71
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 173 PSPADRPPVIPTTXSARDRPPPVS--QPLYLNPSWIFTRSACGNWPVRPVQGRP 328
P A P PTT PPPVS P+ +P + T N P PV P
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPAN-PPPPVSSPP 78
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 29.9 bits (64), Expect = 0.77
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP A P PP + T + PPPVS P +P
Sbjct: 46 PPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASP 82
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPSWIFT 280
PP + P PA PP P ++ PPPV+ P P + T
Sbjct: 71 PPPVSSPPPASPPPATPPPVAS--PPPPVASPPPATPPPVAT 110
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPV-SQPLYLNP 265
PP P PA PP + PPPV + P NP
Sbjct: 33 PPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANP 70
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
S PP P PA+ PP + + A PPP + P +P
Sbjct: 57 SPPPVTTAPPPANPPPPVSSPPPA--SPPPATPPPVASP 93
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXS-ARDRPPPVSQP 250
PP A P P PP + T+ PPP + P
Sbjct: 39 PPPAATPPPVSAPPPVTTSPPPVTTAPPPANPP 71
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 173 PSPADRPPVIPTTXSARDRPPPVS--QPLYLNPSWIFTRSACGNWPVRPVQGRP 328
P A P PTT PPPVS P+ +P + T N P PV P
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPAN-PPPPVSSPP 78
>At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ
boundaries domain protein 13 (LBD13) identical to LOB
DOMAIN 13 [Arabidopsis thaliana] GI:17227158 SP|Q9AT61
Length = 268
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 152 LPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPSWIFTRSACGN 298
LPP P P RPP + ++ A PPVS P +PS + + S+ N
Sbjct: 192 LPPPPP-PPPTPRPPRLLSSQPAPPPTPPVSLP---SPSMVVSSSSSSN 236
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
S+PP A P P PP P S+R P P + P
Sbjct: 586 SIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPP 619
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 161 HQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
HQ PP P +R PPP++QP
Sbjct: 565 HQPINKTPPPPPPPPPPLPSRSIPPPLAQP 594
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP P P PPV TT PP P P
Sbjct: 154 PPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTP 190
Score = 21.8 bits (44), Expect(2) = 1.1
Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Frame = +2
Query: 2 LAHPSVPPAPLFA--RPNHHDHR 64
L P PP PL A HH HR
Sbjct: 95 LRPPPPPPPPLSAITTTGHHHHR 117
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP Q+ P P R P +PTT P P +Y P
Sbjct: 77 PPSQSSP-PRSRCPPVPTTGCCNQPPGPPPSTMYSPP 112
>At1g63570.1 68414.m07186 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function DUF26; similar to receptor-like protein kinase
4 (GI:13506745) [Arabidopsis thaliana]
Length = 284
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 173 PSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PSP+ PP+ PT+ PP + PL P
Sbjct: 249 PSPSSLPPISPTSSPPLSLPPQLPPPLSQPP 279
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187;
contains Pfam profile PF02845: CUE domain
Length = 1973
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 173 PSPADRPPVIPTTXSARDRPPP-VSQPLY--LNPSW 271
P PA P +P T +++ P P V QP+Y N SW
Sbjct: 757 PIPAPGQPAVPATPTSQIPPSPFVQQPIYPPPNSSW 792
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP + PSP D P PT S P P P Y+ P
Sbjct: 217 PPTPSVPSPPDVTPTPPTPPSV---PTPSGSPPYVPP 250
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +2
Query: 146 NSLPPHQAF---PSPADRPPVIPTTXSARDRPPPVSQP 250
NS PP + F P PAD P PPP S P
Sbjct: 116 NSPPPPEVFEPPPPPADEDESPPAPPPPEQLPPPASSP 153
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 152 LPPHQAFPSPADRPPVIPTTXSAR-DRPPPVS 244
L P + P P D PP IP D PPP S
Sbjct: 83 LTPPPSSPPPPDAPPPIPIVFPPPIDSPPPES 114
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 20 PPAPLFARPNHHDHRFRMEQLVS 88
PP+ + P HHDH+ ++E + S
Sbjct: 85 PPSEVIDVPQHHDHKLKLEMVKS 107
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYL 259
PP A P P PP P S+ PPP + LY+
Sbjct: 69 PPPPACPPPPALPPPPPKKVSSYCPPPPPANFLYI 103
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPP 238
PPH ++ PA PP P T PPP
Sbjct: 122 PPHYSYQEPAQYPP--PETKPQEPLPPP 147
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRP---PPVSQPLYLNPSWIFT 280
PP Q P+P PP+ P P PP+ P++ P+ I++
Sbjct: 153 PPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTPIYS 197
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIP--TTXSARDRPPPVSQP 250
PP + P PPV P T S +PPPV +P
Sbjct: 461 PPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKP 494
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIP--TTXSARDRPPPVSQP 250
PP + P PPV P T S +PPPV +P
Sbjct: 511 PPTPTYSPPIKPPPVKPPTPTYSPPIKPPPVHKP 544
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP Q P+P PP+ P + P S P+Y P
Sbjct: 85 PPIQKPPTPTYSPPIYPPPIQ-KPPTPTYSPPIYPPP 120
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP + P P+ PP P PPP P+Y P
Sbjct: 477 PPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 152 LPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
LPP + PSP P+ T + PPP P +P
Sbjct: 402 LPP-PSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSP 438
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP + P PP P PPP P+Y P
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
+S PPH P P PP I S P PVS P
Sbjct: 568 SSPPPHSP-PPPHSPPPPIYPYLSPPPPPTPVSSP 601
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
S PP P P PP + + PPPV P
Sbjct: 418 STPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSP 451
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP P P PP P S PPP P +P
Sbjct: 476 PPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSP 512
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP P P PP P PPP S P Y+ P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYP 426
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPP------VIPTTXSARDRPPPVSQPLYLN 262
SLPP P P PP + P+ R PPP PL+ +
Sbjct: 77 SLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFS 120
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 167 AFPSPADRPPVIPTTXSARDRPPPVSQPLYL 259
+FP PA PP P + R PPP + L L
Sbjct: 526 SFPGPAAFPPPRPGVPTVRPLPPPQNLALNL 556
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 152 LPPHQAFPSPADRPPVIP---TTXSARDRPPPVSQPLYLNPS 268
LP H A P P PP P T + PPP L+PS
Sbjct: 763 LPTHSASPPPPTAPPPPPLGQTRAPSAPPPPPPKLGTKLSPS 804
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 155 PPHQAFPSPADRPP-VIPTTXSARDRPPPVSQPLYLNPS 268
PP A P+PA PP V P+ PP + ++PS
Sbjct: 60 PPPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPS 98
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
PP A P P PP P A PPP + P
Sbjct: 37 PPPVATPPPVATPP--PAATPAPATPPPAATP 66
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ 247
PP Q P P PP A D+PPP Q
Sbjct: 45 PPPQPDPQPPT-PPTFQPAPPANDQPPPPPQ 74
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPL-YLNPS 268
+S PP PS PP + + S+ PPP S PL L+PS
Sbjct: 46 SSAPPSSLSPSS---PPPLSLSPSSPPPPPPSSSPLSSLSPS 84
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPL-YLNPS 268
+S PP PS PP + + S+ PPP S PL L+PS
Sbjct: 95 SSAPPSSLSPSS---PPPLSLSPSSPPPPPPSSSPLSSLSPS 133
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ 247
PP + +P P PP I PPP+ +
Sbjct: 135 PPFKKYPPPEQYPPPIKKYPPPEHYPPPIKK 165
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ 247
PP + +P P PP I PPP+ +
Sbjct: 148 PPIKKYPPPEHYPPPIKKYPPQEQYPPPIKK 178
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ 247
PP + +P P PP I PPP+ +
Sbjct: 174 PPIKKYPPPEKYPPPIKKYPPPEQYPPPIKK 204
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
PP + +P P + PP I T + PP Y +P
Sbjct: 207 PPIKKYPPPEEYPPPIKTYPHPPVKYPPPPYKTYPHP 243
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 155 PPHQAFPSPADRP-PVIPTTXSARDRPPP 238
PPHQ PSP P P P+ +PPP
Sbjct: 51 PPHQPPPSPYPHPHPPPPSPYPHPHQPPP 79
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 155 PPHQAF--PSPADRPPVIPTT-XSARDRPPPVSQP 250
PP A P+P+ +PP +PTT PPV P
Sbjct: 47 PPSPALKPPTPSYKPPTLPTTPIKPPTTKPPVKPP 81
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 158 PHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
P P +PPV P T PPVS P
Sbjct: 65 PTTPIKPPTTKPPVKPPTIPVTPVKPPVSTP 95
>At4g02340.1 68417.m00318 epoxide hydrolase, putative similar to
epoxide hydrolases from Glycine max GI:2764806, Solanum
tuberosum GI:407938; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 324
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 170 FPSPADRPPVIPTTXSARDRPPPVSQPLYL 259
F S RPP IP + R P P S P +L
Sbjct: 177 FTSRNPRPPCIPKSVGFRGLPDPPSLPAWL 206
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPL 253
PP + P P P P + S PP S PL
Sbjct: 28 PPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPL 60
>At1g63480.1 68414.m07178 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 361
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 173 PSPADRPPVIPTTXSARDRPPPVSQPLYLNPSWIFTRSACGNWPVRPVQGRP 328
P P PP P R RP +P+ N S + + N P R +GRP
Sbjct: 86 PPPPPPPPEEPMVKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKR-ARGRP 136
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 PPHQAFPSP-ADRPPVIPTTXSARDRPPPVSQP 250
PP + PSP A P P + S PPP P
Sbjct: 193 PPPRHLPSPPASERPSTPPSDSEHPSPPPPGHP 225
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 167 AFPSPADRPPVIPTTXSARDRPPPVSQPLYL 259
+FP PA PP P R PPP + L L
Sbjct: 538 SFPGPAALPPPRPGVPIVRPLPPPPNLALNL 568
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
PP P P PP P + + PPP +P
Sbjct: 68 PPPPYIPCPP--PPYTPKPPTVKPPPPPYVKP 97
Score = 21.0 bits (42), Expect(2) = 6.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 8 HPSVPPAPLFARPNHH 55
HP+ PP P +P H
Sbjct: 44 HPAKPPKPPTVKPPTH 59
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 152 LPPHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
+PP + P P PP P PPP +P
Sbjct: 366 VPPPRRSPPPLQTPPPPPPPPPLAPPPPPQKRP 398
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PHQAFPSPADRPPVIPTTXSARDRPPPVSQP 250
PH++ PSP +PP P S+ + P P
Sbjct: 1129 PHESPPSPPPQPPSSPPPPSSPPQLAPAPPP 1159
>At4g34300.1 68417.m04875 glycine-rich protein similar to auxin
response factor 30 (GI:20145855) {Arabidopsis thaliana}
Length = 313
Score = 26.6 bits (56), Expect = 7.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 60 WSW*FGRANNGAGGTDGWAN 1
WSW +G +G+ G GW++
Sbjct: 27 WSWSWGSGQSGSNGDWGWSS 46
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
S PP P P+ PPV+ S RPP ++ P +P
Sbjct: 620 SPPPPVFSPPPSQSPPVV---YSPPPRPPKINSPPVQSP 655
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQ---PLYLNPSWIFTRSACGNWPVRPVQGR 325
PP + P P PP P S PPPV P++ P +++ + P PV
Sbjct: 538 PPVHSPPPPVHSPPP-PPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSP 596
Query: 326 P 328
P
Sbjct: 597 P 597
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVS 244
S P P+P PP PTT S PP S
Sbjct: 493 SPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPS 524
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPS 268
SLPP PS + PP T S PPP P L+P+
Sbjct: 161 SLPPSSLPPSAS--PPTNGTPDSETLTPPPAPLPPSLSPN 198
>At2g35600.1 68415.m06030 expressed protein
Length = 331
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 158 PHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPSWI 274
PH + P D + T S+RD PP +S + W+
Sbjct: 244 PHHFYGPPMDAARI---TTSSRDEPPSMSNASEMQGEWV 279
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 26.6 bits (56), Expect = 7.1
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 PSVPPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADR 190
PS+ PAP P HH H HH PP +A SP +
Sbjct: 34 PSLAPAPA---PYHHGHHHP-----HPPHHHHPHPHPHPHPPAKSPVKPPVKAPVSPPAK 85
Query: 191 PPVIPTTXSARDRP--PPVSQPL 253
PPV P P PP P+
Sbjct: 86 PPVKPPVYPPTKAPVKPPTKPPV 108
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 8 HPSVPPAPLFARPNHHDHR 64
HP +PPAP PNHH+ +
Sbjct: 239 HPGMPPAP----PNHHNQQ 253
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 188 RPPVIPTTXSARDRPPPVSQP 250
RPPV+ TT +R P QP
Sbjct: 37 RPPVVATTKRTEEREPAEQQP 57
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 164 QAFPSPADRPPVIPTTXSARDRPPPVSQP 250
Q PSP RP P + PPPVSQP
Sbjct: 79 QRGPSPMSRPGP-PAGMARPGGPPPVSQP 106
>At4g29240.1 68417.m04182 leucine-rich repeat family protein /
extensin family protein contains Pfam PF00560: Leucine
Rich Repeat domains; similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]
Length = 415
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 207 VGITGGRSAGDGNAWCGG 154
VGI GG G G W GG
Sbjct: 38 VGIGGGGGGGGGGVWVGG 55
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPT-TXSARDRPPP 238
NSLPP + SP P P+ T + + PPP
Sbjct: 338 NSLPPPYVYNSPPPPPYYSPSPTVNYKSPPPP 369
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPT---TXSARDRPPPVSQPL 253
PP A P+P+ P PT T +A PP PL
Sbjct: 39 PPRTAAPTPSITPTPTPTPSATPTAAPVSPPAGSPL 74
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 149 SLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
+LPP PSP PPV S PP S P+Y P
Sbjct: 409 ALPPPPP-PSPPLPPPVYSPPPSPPVFSPPPSPPVYSPP 446
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 155 PPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNPSW--IFTRSACGNWPVRPV 316
PP + P P+ PP P PPP + + P +F + +W RP+
Sbjct: 67 PPPTSPPPPSPPPPSPPPPSPPPPSPPPPAFAVGKTPEGCDVFKGNWVKDWSTRPL 122
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 149 SLPPHQAFP--SPADRPPVIPTTXSARDRPPPVSQP 250
S PP A P +PA PP + A PPPV P
Sbjct: 124 SPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQAP 159
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPTTXSARDRPPPVSQPLYLNP 265
+S PP + + + PP PT + + PPP P+Y P
Sbjct: 605 SSPPPPTYYATQSPPPPPPPTYYAVQSPPPP--PPVYYPP 642
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 158 PHQAFPSPADRPPVIPTTXSARDRPPP 238
P + P PP +PTT +A PPP
Sbjct: 502 PLKGSAPPPPPPPPLPTTIAAPPPPPP 528
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 146 NSLPPHQAFPSPADRPPVIPTTXSARDRPPPV 241
+S PP + SP PP P PPPV
Sbjct: 511 SSPPPPYVYSSPPPPPPSPPPPCPESSPPPPV 542
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,823,647
Number of Sequences: 28952
Number of extensions: 142674
Number of successful extensions: 958
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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