Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0480.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 301 KALPYHXDXRX*THVLY 351
           K +P H D R  THV+Y
Sbjct: 655 KFVPEHIDQRLCTHVVY 671


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 397 ATLHRFGIPAFLPWSSKVHEFXTXG 323
           A +H++G     P  S VH   T G
Sbjct: 389 ADMHQYGYNTLSPLPSSVHSHSTIG 413


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 344 YFTRPGKKGRDAKSM*CCWRSXSDGHT 424
           +F   G  GRD +++   W S   G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 344 YFTRPGKKGRDAKSM*CCWRSXSDGHT 424
           +F   G  GRD +++   W S   G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 344 YFTRPGKKGRDAKSM*CCWRSXSDGHT 424
           +F   G  GRD +++   W S   G+T
Sbjct: 49  FFPAQGILGRDFRAIHFTWASARVGYT 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,217
Number of Sequences: 336
Number of extensions: 1963
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)