Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0479.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 199 LTVHKTXIMGLNNVLHYENNTFNWPWL 279
           L V K  I  L   +   N+ F WP+L
Sbjct: 178 LQVIKAQIYSLRETVDVFNDIFGWPFL 204


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 199 LTVHKTXIMGLNNVLHYENNTFNWPWL 279
           L V K  I  L   +   N+ F WP+L
Sbjct: 178 LQVIKAQIYSLRETVDVFNDIFGWPFL 204


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 199 LTVHKTXIMGLNNVLHYENNTFNWPWL 279
           L V K  I  L   +   N+ F WP+L
Sbjct: 498 LQVIKAQIYSLRETVDVFNDIFGWPFL 524


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +3

Query: 498 PSSXIKYS-LHYFIHHQFLKXIQFL 569
           P   +K   LH F HH FL+   F+
Sbjct: 121 PHEEVKLQHLHQFPHHDFLEREGFI 145



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 95  ITRPHSKDHIRPRYNNHTEVRNYHL 169
           I RP+    +  ++N H E++  HL
Sbjct: 90  IHRPNWWHELETKFNPHHEIKLQHL 114


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 184 PYPERLTVHKTXIMGLNNVLHYENNTFNW 270
           PYP       + +M LNN+ +   +  N+
Sbjct: 346 PYPSHSIYPSSNLMPLNNIQNLSQSGINY 374


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 528 YFIHHQFLKXIQFLSI*KESYIIIYVYIPTRRDV 629
           Y +H      + F+ +  +SYI++YV+     DV
Sbjct: 251 YSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDV 284


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 164  DNSELLCDYYNEA*CD 117
            DN++ +CD+  +A CD
Sbjct: 1314 DNNKNICDWPEKATCD 1329


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 282 FQPWPIKCIV 253
           F+PW  KC+V
Sbjct: 477 FEPWREKCVV 486


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,659
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)