Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0478.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.9  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 335 SVSDIEKEHIATQMNDIGTV---CDLLGKTMKV 246
           SVS+I +E   T M+DI  +    D LG+  ++
Sbjct: 17  SVSEISEETCETLMSDINLIKEEFDELGRLQRI 49


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -1

Query: 682 MANLALERXHLDKAKDLFVAVTQRI---MADGATEDDFRVVHISTKLARISH 536
           + N +L + +L K+    V + Q      A G    DFR +H +   AR+ +
Sbjct: 23  LINKSLGKHNLQKSFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGY 74


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -1

Query: 682 MANLALERXHLDKAKDLFVAVTQRI---MADGATEDDFRVVHISTKLARISH 536
           + N +L + +L K+    V + Q      A G    DFR +H +   AR+ +
Sbjct: 23  LINKSLGKHNLQKSFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGY 74


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -1

Query: 682 MANLALERXHLDKAKDLFVAVTQRI---MADGATEDDFRVVHISTKLARISH 536
           + N +L + +L K+    V + Q      A G    DFR +H +   AR+ +
Sbjct: 23  LINKSLGKHNLQKSFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGY 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,333
Number of Sequences: 336
Number of extensions: 2803
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)