Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0478.Seq
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical ...    40   0.001
AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical ...    40   0.001
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    32   0.50 
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    32   0.50 
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de...    32   0.50 
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    32   0.50 
AC091124-1|AAK27878.1|  255|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    29   3.5  
AC006656-2|AAF39880.1|  326|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8b protein.
          Length = 395

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = -1

Query: 742 SLXKPHQMQHQLAITYIYDVMANLALERXHLDKAKDLFVAVTQR-IMADGATEDDFRVVH 566
           +L +  + +  + IT +YD MAN   E+ +LD+A   F  V QR +   G  + D   + 
Sbjct: 118 ALEEAEERKEDMPITRVYDEMANTFYEKMNLDEADKYFRIVIQRLVQLHGKKDFDPEFIG 177

Query: 565 ISTKLARISHLXKDYXTAQ 509
           +S KLA I     D  +A+
Sbjct: 178 VSLKLADILAHRGDLESAE 196


>AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8a protein.
          Length = 396

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = -1

Query: 742 SLXKPHQMQHQLAITYIYDVMANLALERXHLDKAKDLFVAVTQR-IMADGATEDDFRVVH 566
           +L +  + +  + IT +YD MAN   E+ +LD+A   F  V QR +   G  + D   + 
Sbjct: 119 ALEEAEERKEDMPITRVYDEMANTFYEKMNLDEADKYFRIVIQRLVQLHGKKDFDPEFIG 178

Query: 565 ISTKLARISHLXKDYXTAQ 509
           +S KLA I     D  +A+
Sbjct: 179 VSLKLADILAHRGDLESAE 197


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
            beta protein.
          Length = 1418

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -2

Query: 153  KKLLSEARKNCGLALKIGVMSKNKDVKE 70
            +KL+SEA+KN  LALK+ + ++ KD+K+
Sbjct: 1294 RKLMSEAQKNQMLALKLRLEAEGKDLKQ 1321


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
            beta homolog EGL-8 protein.
          Length = 1431

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -2

Query: 153  KKLLSEARKNCGLALKIGVMSKNKDVKE 70
            +KL+SEA+KN  LALK+ + ++ KD+K+
Sbjct: 1307 RKLMSEAQKNQMLALKLRLEAEGKDLKQ 1334


>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
            defective protein 8,isoform a protein.
          Length = 1419

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -2

Query: 153  KKLLSEARKNCGLALKIGVMSKNKDVKE 70
            +KL+SEA+KN  LALK+ + ++ KD+K+
Sbjct: 1295 RKLMSEAQKNQMLALKLRLEAEGKDLKQ 1322


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
            defective protein 8,isoform b protein.
          Length = 1431

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -2

Query: 153  KKLLSEARKNCGLALKIGVMSKNKDVKE 70
            +KL+SEA+KN  LALK+ + ++ KD+K+
Sbjct: 1307 RKLMSEAQKNQMLALKLRLEAEGKDLKQ 1334


>AC091124-1|AAK27878.1|  255|Caenorhabditis elegans Hypothetical
           protein Y47A7.2 protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -2

Query: 156 KKKLLSEARKNCGLALKIGVMSKNKDVKEEAE 61
           KKKLL EA K+C    K GV    K V E+ E
Sbjct: 178 KKKLLKEATKDCATNGKKGVKKTGKRVGEDRE 209


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -3

Query: 581  FSSCSYQYKVSKNKSPXKGLSNC----SVGYEWCLEKLEIIIKSDPSEEKMKLFALAEDW 414
            F     Q ++SK +   +G   C    SVG +     LE+II      E+ +  A+ E +
Sbjct: 2527 FFDAGRQLQISKTEGSDQGRYTCIATNSVGSDDLENTLEVIIPPVIDGERREAVAVIEGF 2586

Query: 413  YGRLFLDTN 387
               LF D+N
Sbjct: 2587 SSELFCDSN 2595


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -3

Query: 581  FSSCSYQYKVSKNKSPXKGLSNC----SVGYEWCLEKLEIIIKSDPSEEKMKLFALAEDW 414
            F     Q ++SK +   +G   C    SVG +     LE+II      E+ +  A+ E +
Sbjct: 2527 FFDAGRQLQISKTEGSDQGRYTCIATNSVGSDDLENTLEVIIPPVIDGERREAVAVIEGF 2586

Query: 413  YGRLFLDTN 387
               LF D+N
Sbjct: 2587 SSELFCDSN 2595


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -3

Query: 581  FSSCSYQYKVSKNKSPXKGLSNC----SVGYEWCLEKLEIIIKSDPSEEKMKLFALAEDW 414
            F     Q ++SK +   +G   C    SVG +     LE+II      E+ +  A+ E +
Sbjct: 2527 FFDAGRQLQISKTEGSDQGRYTCIATNSVGSDDLENTLEVIIPPVIDGERREAVAVIEGF 2586

Query: 413  YGRLFLDTN 387
               LF D+N
Sbjct: 2587 SSELFCDSN 2595


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -3

Query: 581  FSSCSYQYKVSKNKSPXKGLSNC----SVGYEWCLEKLEIIIKSDPSEEKMKLFALAEDW 414
            F     Q ++SK +   +G   C    SVG +     LE+II      E+ +  A+ E +
Sbjct: 2527 FFDAGRQLQISKTEGSDQGRYTCIATNSVGSDDLENTLEVIIPPVIDGERREAVAVIEGF 2586

Query: 413  YGRLFLDTN 387
               LF D+N
Sbjct: 2587 SSELFCDSN 2595


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -3

Query: 581  FSSCSYQYKVSKNKSPXKGLSNC----SVGYEWCLEKLEIIIKSDPSEEKMKLFALAEDW 414
            F     Q ++SK +   +G   C    SVG +     LE+II      E+ +  A+ E +
Sbjct: 2527 FFDAGRQLQISKTEGSDQGRYTCIATNSVGSDDLENTLEVIIPPVIDGERREAVAVIEGF 2586

Query: 413  YGRLFLDTN 387
               LF D+N
Sbjct: 2587 SSELFCDSN 2595


>AC006656-2|AAF39880.1|  326|Caenorhabditis elegans Hypothetical
           protein H12I13.2 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 452 EEKMKLFALAEDWYGRLFLDTNQYEHALXLMXDSLEKMQSVSDIEKEHIATQMNDIGTV 276
           E+K+K+  L ED + R+F  +N YE  L L    ++K       EK   A     +  V
Sbjct: 202 EQKLKIIKLQEDRFDRIFA-SNMYEETLGLRV-HIQKNSLRESFEKFFFANDAYSVDVV 258


>Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical
           protein F29F11.4 protein.
          Length = 713

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = -3

Query: 455 SEEKMKLFALAEDWYGRLFLDTNQYEHALXLMXDSLEKMQSVSDIEKEHIAT-QMNDIGT 279
           SEEK   FA  +DW+     D N  +  L    D  +  +++ + +   IAT   ND+  
Sbjct: 374 SEEKRGFFAEFKDWFAGKVTD-NVIQSKLEDSDDESDSEEALEEFDSPQIATVTANDL-I 431

Query: 278 VCDLLGKTMKV 246
           VC     T +V
Sbjct: 432 VCSNGAATRRV 442


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,277
Number of Sequences: 27780
Number of extensions: 249927
Number of successful extensions: 723
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)