Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0476.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 202 6e-52
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 202 6e-52
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 202 6e-52
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 202 6e-52
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 202 6e-52
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 202 6e-52
AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein. 145 8e-35
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 105 8e-23
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 105 8e-23
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 105 8e-23
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 104 2e-22
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 569 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 628
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 629 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 688
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 689 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 748
Query: 543 IQ 548
IQ
Sbjct: 749 IQ 750
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 569 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 628
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 629 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 688
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 689 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 748
Query: 543 IQ 548
IQ
Sbjct: 749 IQ 750
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 69 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 128
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 129 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 188
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 189 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 248
Query: 543 IQ 548
IQ
Sbjct: 249 IQ 250
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 569 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 628
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 629 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 688
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 689 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 748
Query: 543 IQ 548
IQ
Sbjct: 749 IQ 750
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 228 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 287
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 288 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 347
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 348 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 407
Query: 543 IQ 548
IQ
Sbjct: 408 IQ 409
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 202 bits (493), Expect = 6e-52
Identities = 100/182 (54%), Positives = 120/182 (65%)
Frame = +3
Query: 3 PIXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDF 182
PI KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R +
Sbjct: 569 PIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQEL 628
Query: 183 KTRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLR 362
K RARYL EKYE+DV EARKIWCF P P K +++ + +
Sbjct: 629 KQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK 688
Query: 363 KELWLKRICVVLXFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWSLYIFCE 542
+ + + F+++DVTLH DAIHRGGGQIIPT RRCLYA +LTA P E
Sbjct: 689 EGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVE 748
Query: 543 IQ 548
IQ
Sbjct: 749 IQ 750
>AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein.
Length = 151
Score = 145 bits (352), Expect = 8e-35
Identities = 65/88 (73%), Positives = 73/88 (82%)
Frame = +3
Query: 12 KSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTR 191
KSDPVVSYRETV+EES+ LCLSKSPNKHNRL+MKA+P PDGL EDID+G V+ R + K R
Sbjct: 7 KSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKAR 66
Query: 192 ARYLTEKYEYDVTEARKIWCFAPRVPAP 275
ARYL EKYE+DV EARKIWCF P P
Sbjct: 67 ARYLAEKYEWDVAEARKIWCFGPDGTGP 94
Score = 69.7 bits (163), Expect = 6e-12
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +2
Query: 257 PEGTGPNILVDCSKGVQYLNEIKDSVVXGFQWAAKE 364
P+GTGPNIL D +KGVQYLNEIKDSVV GFQWA KE
Sbjct: 89 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 124
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 105 bits (253), Expect = 8e-23
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +3
Query: 6 IXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFK 185
I +DPVV++ ETV E S C +++PNK N++ M A+P+ GL EDI+ V + K
Sbjct: 658 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 717
Query: 186 TRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLRK 365
+ KY++D+ AR IW F P P I + S + LL ++
Sbjct: 718 KLGEFFQTKYDWDLLAARSIWAFGPDATGPN---ILVDDTLPSEVDKALLGSVKDSIVQG 774
Query: 366 ELWLKR---ICVVL----XFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWS 524
W R +C L F I D + + +HRGGGQIIPT RR +Y+ L A P
Sbjct: 775 FQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLME 834
Query: 525 LYIFCEIQ 548
Y F E+Q
Sbjct: 835 PYYFVEVQ 842
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 105 bits (253), Expect = 8e-23
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +3
Query: 6 IXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFK 185
I +DPVV++ ETV E S C +++PNK N++ M A+P+ GL EDI+ V + K
Sbjct: 653 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 712
Query: 186 TRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLRK 365
+ KY++D+ AR IW F P P I + S + LL ++
Sbjct: 713 KLGEFFQTKYDWDLLAARSIWAFGPDATGPN---ILVDDTLPSEVDKALLGSVKDSIVQG 769
Query: 366 ELWLKR---ICVVL----XFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWS 524
W R +C L F I D + + +HRGGGQIIPT RR +Y+ L A P
Sbjct: 770 FQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLME 829
Query: 525 LYIFCEIQ 548
Y F E+Q
Sbjct: 830 PYYFVEVQ 837
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 105 bits (253), Expect = 8e-23
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +3
Query: 6 IXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFK 185
I +DPVV++ ETV E S C +++PNK N++ M A+P+ GL EDI+ V + K
Sbjct: 653 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 712
Query: 186 TRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLRK 365
+ KY++D+ AR IW F P P I + S + LL ++
Sbjct: 713 KLGEFFQTKYDWDLLAARSIWAFGPDATGPN---ILVDDTLPSEVDKALLGSVKDSIVQG 769
Query: 366 ELWLKR---ICVVL----XFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWS 524
W R +C L F I D + + +HRGGGQIIPT RR +Y+ L A P
Sbjct: 770 FQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLME 829
Query: 525 LYIFCEIQ 548
Y F E+Q
Sbjct: 830 PYYFVEVQ 837
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 104 bits (250), Expect = 2e-22
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Frame = +3
Query: 6 IXKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFK 185
I +DPVV++ ETV E S C +++PNK N++ M A+P+ GL EDI+ V + K
Sbjct: 531 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 590
Query: 186 TRARYLTEKYEYDVTEARKIWCFAPRVPAPTSWWIAPKEFSTSMKLRTLLXLDSSGPLRK 365
+ KY++D+ AR IW F P P I + S + LL ++
Sbjct: 591 KLGEFFQTKYDWDLLAARSIWAFGPDATGPN---ILVDDTLPSEVDKALLGSVKDSIVQG 647
Query: 366 ELWLKR---ICVVL----XFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHPVSWS 524
W R +C L F I D + +HRGGGQIIPT RR +Y+ L A P
Sbjct: 648 FQWGTREGPLCDELIRNVKFKILDAVVAQKPLHRGGGQIIPTARRVVYSAFLMATPRLME 707
Query: 525 LYIFCEIQ 548
Y F E+Q
Sbjct: 708 PYYFVEVQ 715
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,325,845
Number of Sequences: 237096
Number of extensions: 1922778
Number of successful extensions: 8131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8097
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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