Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0475.Seq
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D560C0 Cluster: PREDICTED: hypothetical protein;... 51 3e-05
UniRef50_UPI0000DB7925 Cluster: PREDICTED: hypothetical protein;... 44 0.004
UniRef50_Q8SXT4 Cluster: RE28509p; n=3; Sophophora|Rep: RE28509p... 41 0.036
UniRef50_Q5NWK2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_UPI0000E47C7F Cluster: PREDICTED: similar to MEGF6; n=2... 35 2.4
UniRef50_Q9KJ87 Cluster: Assimilatory nitrate reductase; n=9; Ba... 34 4.2
UniRef50_UPI0000E47B25 Cluster: PREDICTED: hypothetical protein,... 33 5.5
UniRef50_A7S4G6 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.3
UniRef50_A7TNP0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q3ZVT2 Cluster: Sensor protein; n=2; Dehalococcoides|Re... 33 9.7
UniRef50_A6QXW3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_UPI0000D560C0 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 227
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 256 PCNVVCNKTHHNYDSGLCVKECQGYLLDLRYMRRSETAPPPNDL 387
PC+ +C+K+ HN+D CVK+CQ Y+ D RY+ + ET +L
Sbjct: 52 PCSKICDKSTHNFDETECVKKCQDYIHDSRYVLKDETGTGDQNL 95
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 170 AQITLDGIRCGQLICQLDEYCSPETNRC 253
++ITL CGQ C+ DEYC+ T C
Sbjct: 23 SEITLGETSCGQKKCKRDEYCTSYTKAC 50
>UniRef50_UPI0000DB7925 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 265
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 241 DQPMRPCNVVCNKTHHNYDSGLCVKECQGYLLDLRYMRRSETAPPPNDLGSI 396
D+ +PC+ +CNKT NY C +CQ YL D RY+ +E ++G +
Sbjct: 40 DKSCKPCSSICNKTARNYLPQECFSDCQVYLHDERYVLLNEYEELRGEVGRL 91
Score = 36.7 bits (81), Expect = 0.59
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 125 MSGFVCVLMLAGVASAQITLDGIRCGQLICQLDEYCSPETNRC 253
M+ V +L++ G +A + DG +CG+ C EYCS C
Sbjct: 1 MTLLVALLLMVGSTTAALNHDGAKCGEKHCSTIEYCSSYDKSC 43
>UniRef50_Q8SXT4 Cluster: RE28509p; n=3; Sophophora|Rep: RE28509p -
Drosophila melanogaster (Fruit fly)
Length = 241
Score = 40.7 bits (91), Expect = 0.036
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 256 PCNVVCNKTHHNYDSGLCVKECQGY 330
PC VCN HNYD+ LC KEC Y
Sbjct: 56 PCIEVCNNQTHNYDAFLCAKECSAY 80
>UniRef50_Q5NWK2 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 432
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 103 RCFREERDVGIRVCPDARWRRLRSNHPG-RHQMRSADMSARRILLP 237
R R RD +R PD ++ RLRS+H G R + + D +A+R+L P
Sbjct: 17 RARRPRRDAPLRRRPDPQYPRLRSDHAGPRRRGHAGDRAAKRLLEP 62
>UniRef50_UPI0000E47C7F Cluster: PREDICTED: similar to MEGF6; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
MEGF6 - Strongylocentrotus purpuratus
Length = 993
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 62 SYHSACVCSCENVHGALEKREMSGFVCVLMLAGVASAQITLDG---IRCGQLI-CQLDEY 229
+Y C +C ++G + + CV GV I DG + C + CQL ++
Sbjct: 793 TYGPDCAHTCACMNGGVCDPVLGCIDCVPGWIGVGCKDICQDGTFGLHCSSVCNCQLTDF 852
Query: 230 CSPETNRC 253
C PET C
Sbjct: 853 CDPETGYC 860
>UniRef50_Q9KJ87 Cluster: Assimilatory nitrate reductase; n=9;
Bacteria|Rep: Assimilatory nitrate reductase -
Pseudomonas putida
Length = 724
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 137 VCVLMLAGVASAQITLDGIRCGQLICQLDEYCSPETNRCVRAMLSA 274
+C +A VA+ Q +DG+R +L+ D + ETNR +L A
Sbjct: 401 ICSNPVASVANRQQVIDGLRKAELVITQDAFLDTETNRYADILLPA 446
>UniRef50_UPI0000E47B25 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 1294
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 521 QEPREAVP**LDASQPSCRKRRNRNPNSSFEIRNPDPLRRTEPTFNVEGLKRPEPYKSGL 700
++ R+ +P S+ + + RR R +P+RR EPT E +RPEP +
Sbjct: 837 EDTRKELPRREGPSRRAEQTRREEPARREEPTRREEPVRREEPTRREEPTRRPEPQRRSA 896
Query: 701 KVKGATTPKDD 733
+ P+ D
Sbjct: 897 NRREENFPRRD 907
>UniRef50_A7S4G6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 440
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 557 ASQPSCRKRRNRNPNSSFEIRNPDPLRRTEPTFNVEGLKRPEP 685
ASQPS R RRN +P+SS P PLR T P F++ L+ P P
Sbjct: 2 ASQPS-RPRRNNSPSSS---SRPQPLRATHP-FSL--LRNPSP 37
>UniRef50_A7TNP0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 856
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 82 LFLRKCTRCFREERDVGIRVCPDARWRRLRSNHPGRHQMRSADMS 216
+FL+ C RCFR ++ + R R+ RS P +H S ++S
Sbjct: 85 IFLKPCQRCFRSKKICAFDLSKRTRKRKSRSIGPLKHSASSEEVS 129
>UniRef50_Q3ZVT2 Cluster: Sensor protein; n=2; Dehalococcoides|Rep:
Sensor protein - Dehalococcoides sp. (strain CBDB1)
Length = 537
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 176 ITLDGIRCGQLICQLDEYCSPETNRCVRAMLSAIKHTITTIAAFALRNAKVIYWI*GTCD 355
+ + + CG+L+ + EY P+ +++ ++H + I A LR ++I + G
Sbjct: 382 LNTEKVDCGKLLSNIVEYVQPQVQSKNQSLEFVVQHNLPAIEADPLRLKQIIMNVLGN-S 440
Query: 356 VRRRPRHPTI 385
++ PR+ TI
Sbjct: 441 LKFTPRNGTI 450
>UniRef50_A6QXW3 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 668
Score = 32.7 bits (71), Expect = 9.7
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 379 WVAGPSPNVACTS-NPIDNLGIP*RKGRYRS-YGVFYCRQHCTDASVGLRGAVFV*LTYQ 206
+ +G S N++ + +D LG KG Y + Y V +CR H VGLRG V Q
Sbjct: 258 FTSGSSFNISLDEVDTLDELG----KGNYGTVYKVRHCRPHLRRPGVGLRGTVSRQTVAQ 313
Query: 205 LTASDAVQGDLS 170
T++ A G S
Sbjct: 314 STSTPASSGPTS 325
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,682,389
Number of Sequences: 1657284
Number of extensions: 14249509
Number of successful extensions: 37511
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37489
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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