Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0474.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens ... 33 0.55
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 31 1.7
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 31 1.7
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 31 1.7
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 31 1.7
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 31 2.2
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 31 2.2
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 31 2.9
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 31 2.9
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 31 2.9
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 30 3.9
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 30 3.9
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 30 3.9
BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein. 30 5.1
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein. 30 5.1
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein. 30 5.1
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac... 30 5.1
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf... 30 5.1
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf... 30 5.1
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf... 30 5.1
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf... 30 5.1
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf... 30 5.1
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf... 30 5.1
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf... 30 5.1
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf... 30 5.1
AK131498-1|BAD18642.1| 1052|Homo sapiens protein ( Homo sapiens ... 30 5.1
>AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ45737 fis, clone JCMLC2002751, weakly similar
to Von Willebrand factor precursor. ).
Length = 394
Score = 33.1 bits (72), Expect = 0.55
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 353 IAXCHCDXGYLFNSEGKCVPVAXC 282
+A C+C G L++ EG+CVP + C
Sbjct: 192 VAGCNCPLGLLWDPEGQCVPPSLC 215
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 413 PCVPTXADPELXHXSCVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
PC T C A + C C G + G CVP A C
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 413 PCVPTXADPELXHXSCVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
PC T C A + C C G + G CVP A C
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 413 PCVPTXADPELXHXSCVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
PC T C A + C C G + G CVP A C
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQC 707
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 440 PENAH--ATLNPCVPTXADPELXHXSCVTAFIAXCHCDXGYLFNSEGKCVP 294
P N+H + ++ C P A L C + CHCD GY+ N + +P
Sbjct: 1373 PPNSHYESCVSVCQPRCAAIRLKS-DCSHYCVEGCHCDAGYVLNGKSCILP 1422
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 368 CVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
C C CD G+L+N + CVP+ C
Sbjct: 1558 CQDGCAEGCQCDSGFLYNGQA-CVPIQQC 1585
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 368 CVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
C C CD G+L+N + CVP+ C
Sbjct: 2759 CPDGCAEGCQCDSGFLYNGQA-CVPIQQC 2786
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 368 CVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
C C CD G+L+N + CVP+ C
Sbjct: 3960 CPDGCAEGCQCDSGFLYNGQA-CVPIQQC 3987
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 368 CVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
C C CD G+L+N + CVP+ C
Sbjct: 1558 CQDGCAEGCQCDSGFLYNGQA-CVPIQQC 1585
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 368 CVTAFIAXCHCDXGYLFNSEGKCVPVAXC 282
C C CD G+L+N + CVP+ C
Sbjct: 2759 CPDGCAEGCQCDSGFLYNGQA-CVPIQQC 2786
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -3
Query: 419 LNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
++ C PT +C +F+ C C G N G CVP C
Sbjct: 665 VDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQEC 712
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -3
Query: 419 LNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
++ C PT +C +F+ C C G N G CVP C
Sbjct: 706 VDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQEC 753
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -3
Query: 419 LNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
++ C PT +C +F+ C C G N G CVP C
Sbjct: 704 VDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQKC 751
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -3
Query: 428 HATLNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
H ++ C PT +C FI C C G + GKCV + C
Sbjct: 711 HYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 761
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -3
Query: 428 HATLNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
H ++ C PT +C FI C C G + GKCV + C
Sbjct: 713 HYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 763
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -3
Query: 428 HATLNPCVPTXADPELXHXSCVTAFIAX--CHCDXGYLFNSEGKCVPVAXC 282
H ++ C PT +C FI C C G + GKCV + C
Sbjct: 711 HYHVSACQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNC 761
>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
Length = 1068
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
chloride-activated ATP-sensitive potassium channel
protein.
Length = 1135
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
>AK131498-1|BAD18642.1| 1052|Homo sapiens protein ( Homo sapiens
cDNA FLJ16700 fis, clone TRACH3005211, moderately
similar to Rattus norvegicus potassium channel subunit
(Slack) (Slack). ).
Length = 1052
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 6 LFLFFIKNSRYVSLNVSIFNFNFWIYXLLLRCMDXLTAHLVLNSYWS 146
L LFFIKN R SL + +FNF+ + LL + L + + WS
Sbjct: 48 LKLFFIKNQRS-SLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNEWS 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,279,023
Number of Sequences: 237096
Number of extensions: 859722
Number of successful extensions: 1201
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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