Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0472.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0001596899 Cluster: hypothetical protein LOC90120; n... 35 0.88
UniRef50_Q4XR11 Cluster: Putative uncharacterized protein; n=1; ... 35 0.88
UniRef50_P05687 Cluster: Chorion class high-cysteine HCA protein... 34 1.5
UniRef50_Q8RYR7 Cluster: Putative MtN21; n=3; Oryza sativa (japo... 33 4.7
UniRef50_Q7YWV7 Cluster: Putative uncharacterized protein; n=2; ... 33 4.7
UniRef50_Q22NA0 Cluster: ABC transporter family protein; n=1; Te... 33 4.7
UniRef50_Q17641 Cluster: Putative uncharacterized protein; n=11;... 33 4.7
UniRef50_Q83AQ0 Cluster: Putative uncharacterized protein; n=7; ... 32 6.2
UniRef50_UPI0001552953 Cluster: PREDICTED: hypothetical protein;... 32 8.2
>UniRef50_UPI0001596899 Cluster: hypothetical protein LOC90120; n=1;
Homo sapiens|Rep: hypothetical protein LOC90120 - Homo
sapiens
Length = 135
Score = 35.1 bits (77), Expect = 0.88
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 152 SCCGRTAASCRCCGCSWAA 96
SCC ++ASCRCC C WAA
Sbjct: 111 SCCA-SSASCRCCCCCWAA 128
>UniRef50_Q4XR11 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 226
Score = 35.1 bits (77), Expect = 0.88
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 227 NLKKYS-TQFSYXIKLYTSMLHEQI*FKFST--MSFNFSLCFYI*LNKAI*TVYTCNVNY 397
+LKKY+ +F ++ YT Q K NF++C Y+ K I ++ ++ Y
Sbjct: 146 SLKKYNINKFDENLEFYTYSFSNQNSVKCERDYNKTNFNICIYLPTKKEIDILFIIDILY 205
Query: 398 PCFYFNSVFYFPI 436
FYFN Y PI
Sbjct: 206 DYFYFN--LYIPI 216
>UniRef50_P05687 Cluster: Chorion class high-cysteine HCA protein 12
precursor; n=1; Bombyx mori|Rep: Chorion class
high-cysteine HCA protein 12 precursor - Bombyx mori
(Silk moth)
Length = 124
Score = 34.3 bits (75), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 185 ACRRGCRTXAGSCCGRTAASCRCCGC 108
AC GC + G CCG C CGC
Sbjct: 75 ACASGCVSICGRCCGCGCGGCGGCGC 100
>UniRef50_Q8RYR7 Cluster: Putative MtN21; n=3; Oryza sativa
(japonica cultivar-group)|Rep: Putative MtN21 - Oryza
sativa subsp. japonica (Rice)
Length = 369
Score = 32.7 bits (71), Expect = 4.7
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = -3
Query: 320 TLC*I*TR--FVRATSTYII*XNKKIVYCIFLDFITXXIKLGSVXSXACRRGCRTXAGSC 147
T C I T+ F + TSTY++ + I+ + L + ++ + + + + +
Sbjct: 23 TRCTILTKVAFSQGTSTYVLVFYRNIIAAVVLLPVALAVERKTAPPLSLKVSLKLFVHAL 82
Query: 146 CGRTAA-SCRCCGCSWAAFLAVAAI-SISPICSTF 48
CG +AA + C G ++++ A +A+ +I P+ + F
Sbjct: 83 CGMSAAMNISCIGLNYSSATAASAVQNIMPVLTFF 117
>UniRef50_Q7YWV7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 212
Score = 32.7 bits (71), Expect = 4.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 182 CRRGCRTXAGSCCGRTAASCR--CCGC 108
CRR C CC R CR CCGC
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>UniRef50_Q22NA0 Cluster: ABC transporter family protein; n=1;
Tetrahymena thermophila SB210|Rep: ABC transporter
family protein - Tetrahymena thermophila SB210
Length = 1858
Score = 32.7 bits (71), Expect = 4.7
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 239 YSTQFSYXIKLYTSMLHEQI*FKFSTMSFNFSLCFYI*LNKAI*TVYTCNVNYPCFYFNS 418
++ + Y +K Y + EQ+ ++N+ LC I +NKA+ VY +Y F+ N+
Sbjct: 119 FTKNYQYPVKRYQDV--EQVNKHVKDPNYNYDLCLGIQMNKALNNVY----DYTLFFNNT 172
Query: 419 VFYF 430
YF
Sbjct: 173 GKYF 176
>UniRef50_Q17641 Cluster: Putative uncharacterized protein; n=11;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 197
Score = 32.7 bits (71), Expect = 4.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 182 CRRGCRTXAGSCCGRTAASCR--CCGC 108
CRR C CC R CR CCGC
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>UniRef50_Q83AQ0 Cluster: Putative uncharacterized protein; n=7;
Coxiella burnetii|Rep: Putative uncharacterized protein
- Coxiella burnetii
Length = 482
Score = 32.3 bits (70), Expect = 6.2
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 375 YTLVMLTTRVFILILYFTFQ*KNVLLSGREFDIKLIDTVDL 497
YTLV+LT +F +++ FTF L S R + + LI ++ L
Sbjct: 146 YTLVILTELLFAIVIGFTFLIGTYLFSSRSYKLGLIFSLGL 186
>UniRef50_UPI0001552953 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 205
Score = 31.9 bits (69), Expect = 8.2
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = -3
Query: 173 GCRTXAGSC-CGRTAASCRCCGC 108
GC + G C CG C CCGC
Sbjct: 61 GCSSCCGGCGCGGCGGCCGCCGC 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,293,321
Number of Sequences: 1657284
Number of extensions: 4803276
Number of successful extensions: 11748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11699
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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