Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0472.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.1  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 273 YNLMX*ENCVLYFFRFY 223
           +NL+  +NCV+YF R +
Sbjct: 139 HNLIRLKNCVIYFNRIF 155


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 305 KFSTMSFNFSLCFY 346
           +F+T+ F+F  C+Y
Sbjct: 264 QFNTIVFSFCYCYY 277


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 255 ENCVLYFFRFYH 220
           +NC+ Y F  YH
Sbjct: 281 KNCLSYCFNLYH 292


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 255 ENCVLYFFRFYH 220
           +NC+ Y F  YH
Sbjct: 281 KNCLSYCFNLYH 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,140
Number of Sequences: 336
Number of extensions: 1433
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)