Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0472.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113448-1|AAI13449.1|   99|Homo sapiens late cornified envelope...    30   3.9  
BC113446-1|AAI13447.1|   99|Homo sapiens late cornified envelope...    30   3.9  
BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated prot...    30   3.9  
BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated prot...    30   3.9  
AL139247-8|CAI21686.1|   99|Homo sapiens late cornified envelope...    30   3.9  
AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated prot...    30   3.9  
X55293-1|CAA39005.1|  169|Homo sapiens ultra high-sulphur kerati...    29   6.8  
BC101744-1|AAI01745.2|  169|Homo sapiens keratin associated prot...    29   6.8  
BC069531-1|AAH69531.1|  169|Homo sapiens keratin associated prot...    29   6.8  
AJ006693-1|CAA07189.1|  169|Homo sapiens ultra high sulfer kerat...    29   6.8  
AB126078-1|BAD20205.1|  169|Homo sapiens keratin associated prot...    29   6.8  
X63755-1|CAA45283.1|  169|Homo sapiens high-sulpher keratin prot...    29   9.0  

>BC113448-1|AAI13449.1|   99|Homo sapiens late cornified envelope 4A
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCC 114
           C   C     SCCG ++  C CC
Sbjct: 29  CASSCPPPISSCCGSSSGGCGCC 51


>BC113446-1|AAI13447.1|   99|Homo sapiens late cornified envelope 4A
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCC 114
           C   C     SCCG ++  C CC
Sbjct: 29  CASSCPPPISSCCGSSSGGCGCC 51


>BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCCGC 108
           C+ GC    GSCCG   + C   GC
Sbjct: 24  CQPGCCGCCGSCCGCGGSGCGGSGC 48



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -3

Query: 173 GCRTXAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 51
           GC    G CCG +     CCG   +          +PIC T
Sbjct: 67  GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104


>BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCCGC 108
           C+ GC    GSCCG   + C   GC
Sbjct: 24  CQPGCCGCCGSCCGCGGSGCGGSGC 48



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -3

Query: 173 GCRTXAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 51
           GC    G CCG +     CCG   +          +PIC T
Sbjct: 67  GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104


>AL139247-8|CAI21686.1|   99|Homo sapiens late cornified envelope 4A
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCC 114
           C   C     SCCG ++  C CC
Sbjct: 29  CASSCPPPISSCCGSSSGGCGCC 51


>AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated protein
           16.1 protein.
          Length = 105

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 182 CRRGCRTXAGSCCGRTAASCRCCGC 108
           C+ GC    GSCCG   + C   GC
Sbjct: 24  CQPGCCGCCGSCCGCGGSGCGGSGC 48



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -3

Query: 173 GCRTXAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 51
           GC    G CCG +     CCG   +          +PIC T
Sbjct: 67  GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104


>X55293-1|CAA39005.1|  169|Homo sapiens ultra high-sulphur keratin
           protein protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICS 54
           C  GC +  G C   CG   + CR CG  C    +         P CS
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACS 53


>BC101744-1|AAI01745.2|  169|Homo sapiens keratin associated protein
           5-9 protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICS 54
           C  GC +  G C   CG   + CR CG  C    +         P CS
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACS 53


>BC069531-1|AAH69531.1|  169|Homo sapiens keratin associated protein
           5-9 protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICS 54
           C  GC +  G C   CG   + CR CG  C    +         P CS
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACS 53


>AJ006693-1|CAA07189.1|  169|Homo sapiens ultra high sulfer keratin
           protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICS 54
           C  GC +  G C   CG   + CR CG  C    +         P CS
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACS 53


>AB126078-1|BAD20205.1|  169|Homo sapiens keratin associated protein
           protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICS 54
           C  GC +  G C   CG   + CR CG  C    +         P CS
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACS 53


>X63755-1|CAA45283.1|  169|Homo sapiens high-sulpher keratin
           protein.
          Length = 169

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = -3

Query: 182 CRRGCRTXAGSC---CGRTAASCRCCGCSWAA 96
           C  GC +  G C   CG   + CR CG S  A
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCA 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,809,204
Number of Sequences: 237096
Number of extensions: 721452
Number of successful extensions: 1800
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)