Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0471.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.7  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   9.9  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   9.9  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 581 KLTLAARVDACHESTDGHIGRQLRETSKR 495
           K+  A R+DA H    GHI +Q R T  R
Sbjct: 361 KVRKAIRLDAAHSEMKGHI-KQGRRTHAR 388


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 204 NVLLMRTFVFSSICGSRFGPC*TCRSCLACILNLLGTR 317
           NVLL+  F+  SI G+   P    ++C +C ++ +  R
Sbjct: 320 NVLLLILFLCVSILGTLITPELWMKNCKSCSISPVSDR 357


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = -2

Query: 201 KRTYRNNSSTAVLPVLEDKYLVLRLLWPSRLYRVWKSSILKPQKLG 64
           ++T ++++    L  LE+K++  +  W +  YR +   I    K G
Sbjct: 346 EQTGKSSAELVRLKKLEEKFVSKKDRWNTNTYRTYLHMIKTKGKFG 391


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 100 LEIVNPQAAETRTNE 56
           L+ VNP A ETRT E
Sbjct: 31  LKEVNPLAGETRTEE 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,019
Number of Sequences: 2352
Number of extensions: 8400
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)