Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0471.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p pro...   126   2e-29
AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA...   126   2e-29
AY113348-1|AAM29353.1|  128|Drosophila melanogaster GH17694p pro...    29   6.3  
AE014134-669|AAN10359.1|  215|Drosophila melanogaster CG31959-PB...    29   6.3  

>AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p
           protein.
          Length = 501

 Score =  126 bits (305), Expect = 2e-29
 Identities = 61/87 (70%), Positives = 69/87 (79%)
 Frame = -1

Query: 262 GPNRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTASSVAFTPLQGLEIVNP 83
           G  RLPQ+DEKTKVRISKT          YGG T+++RQ+SGTASSVAFTPLQGLEIVNP
Sbjct: 413 GRIRLPQVDEKTKVRISKTLHKNLQKQQVYGGNTTVKRQISGTASSVAFTPLQGLEIVNP 472

Query: 82  QAAETRTNEGNAKYFSNTSGFLSVGKK 2
           QAAE    E NAKYFSNTSGF+SVG++
Sbjct: 473 QAAERSQTEANAKYFSNTSGFMSVGQR 499



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 46/84 (54%), Positives = 53/84 (63%)
 Frame = -2

Query: 507 NIEKKLDKLQEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFAD 328
           ++EKKLDKLQE            PIE S              RYA+TEFRK ANR+NF D
Sbjct: 331 DVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGD 390

Query: 327 IEDDAYQEDLGYTRGTIGKSSTGR 256
           IE+DAYQ DLGY+RGTIGK+ TGR
Sbjct: 391 IEEDAYQGDLGYSRGTIGKTGTGR 414



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 596 KLVSTKLTLAARVDACHESTDGHIGRQLRE 507
           +LV+ K  LAARVDACHES  G IG + +E
Sbjct: 301 RLVAAKSVLAARVDACHESVHGEIGLRFKE 330


>AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA
           protein.
          Length = 501

 Score =  126 bits (305), Expect = 2e-29
 Identities = 61/87 (70%), Positives = 69/87 (79%)
 Frame = -1

Query: 262 GPNRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTASSVAFTPLQGLEIVNP 83
           G  RLPQ+DEKTKVRISKT          YGG T+++RQ+SGTASSVAFTPLQGLEIVNP
Sbjct: 413 GRIRLPQVDEKTKVRISKTLHKNLQKQQVYGGNTTVKRQISGTASSVAFTPLQGLEIVNP 472

Query: 82  QAAETRTNEGNAKYFSNTSGFLSVGKK 2
           QAAE    E NAKYFSNTSGF+SVG++
Sbjct: 473 QAAERSQTEANAKYFSNTSGFMSVGQR 499



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 46/84 (54%), Positives = 53/84 (63%)
 Frame = -2

Query: 507 NIEKKLDKLQEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFAD 328
           ++EKKLDKLQE            PIE S              RYA+TEFRK ANR+NF D
Sbjct: 331 DVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGD 390

Query: 327 IEDDAYQEDLGYTRGTIGKSSTGR 256
           IE+DAYQ DLGY+RGTIGK+ TGR
Sbjct: 391 IEEDAYQGDLGYSRGTIGKTGTGR 414



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 596 KLVSTKLTLAARVDACHESTDGHIGRQLRE 507
           +LV+ K  LAARVDACHES  G IG + +E
Sbjct: 301 RLVAAKSVLAARVDACHESVHGEIGLRFKE 330


>AY113348-1|AAM29353.1|  128|Drosophila melanogaster GH17694p
           protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 590 VSTKLTLAARVDACHESTDGHIG-RQLRET 504
           VSTK T ++ +D  ++S D H G R+LR T
Sbjct: 32  VSTKTTYSSHMDRSYDSEDEHTGRRRLRHT 61


>AE014134-669|AAN10359.1|  215|Drosophila melanogaster CG31959-PB
           protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 590 VSTKLTLAARVDACHESTDGHIG-RQLRET 504
           VSTK T ++ +D  ++S D H G R+LR T
Sbjct: 32  VSTKTTYSSHMDRSYDSEDEHTGRRRLRHT 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,335,747
Number of Sequences: 53049
Number of extensions: 369263
Number of successful extensions: 977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)