Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0470.Seq
         (459 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1242|AAF54590.2|  521|Drosophila melanogaster CG4739-PA...    28   6.9  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    27   9.2  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    27   9.2  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    27   9.2  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    27   9.2  

>AE014297-1242|AAF54590.2|  521|Drosophila melanogaster CG4739-PA
           protein.
          Length = 521

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +2

Query: 164 IICVITGGRTSWESARVGTTTPPISAVKQ*SFRFEGWGSRCNYTETLELISHGGWRIY 337
           +I + + G T W S  VGT +PP S V     RF   G R N+ E  + +   G++IY
Sbjct: 153 LITLSSLGATGWTSDLVGTPSPP-SYVPHSLLRF---GDRMNFWERAQNL---GFQIY 203


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 356 AHRHLQCKCATHHEI*VLRSQYSYNGYPTL 267
           AH HLQ KC    E+     + ++NG P+L
Sbjct: 50  AHEHLQWKCVAEFEL--CLEEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 356 AHRHLQCKCATHHEI*VLRSQYSYNGYPTL 267
           AH HLQ KC    E+     + ++NG P+L
Sbjct: 50  AHEHLQWKCVAEFEL--CLEEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 356 AHRHLQCKCATHHEI*VLRSQYSYNGYPTL 267
           AH HLQ KC    E+     + ++NG P+L
Sbjct: 272 AHEHLQWKCVAEFEL--CLEEIAFNGTPSL 299


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 356 AHRHLQCKCATHHEI*VLRSQYSYNGYPTL 267
           AH HLQ KC    E+     + ++NG P+L
Sbjct: 234 AHEHLQWKCVAEFEL--CLEEIAFNGTPSL 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,159,020
Number of Sequences: 53049
Number of extensions: 466347
Number of successful extensions: 1000
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)