Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0468.Seq
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 145 7e-34
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 133 3e-30
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 131 1e-29
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 130 3e-29
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 126 3e-28
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 113 3e-24
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 90 4e-17
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 89 1e-16
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 83 7e-15
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 79 7e-14
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 79 9e-14
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 76 9e-13
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 75 1e-12
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 75 1e-12
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 69 7e-11
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 3e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 54 2e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 45 0.001
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 38 0.21
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.48
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.84
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 1.5
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 2.0
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 2.6
UniRef50_Q7M992 Cluster: ATP-BINDING PROTEIN; n=1; Wolinella suc... 34 3.4
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 3.4
UniRef50_A2ERL3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 6.0
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 7.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 145 bits (352), Expect = 7e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 9e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 133 bits (322), Expect = 3e-30
Identities = 60/77 (77%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDH 77
DDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRK++GGK+LGFF+
Sbjct: 114 EEARRKNVGGKVLGFFY 130
Score = 89.4 bits (212), Expect = 6e-17
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE V
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYV 53
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 131 bits (317), Expect = 1e-29
Identities = 60/77 (77%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DH
Sbjct: 177 DDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDH 236
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 237 EEARRKHTGGKILGFFF 253
Score = 101 bits (242), Expect = 2e-20
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEII 176
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 130 bits (314), Expect = 3e-29
Identities = 58/76 (76%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD
Sbjct: 152 DDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDR 211
Query: 76 EEARRKHLGGKILGFF 29
EE R+KH GG+ILGFF
Sbjct: 212 EEGRQKHTGGEILGFF 227
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = -1
Query: 417 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEII 151
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 126 bits (305), Expect = 3e-28
Identities = 58/77 (75%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D
Sbjct: 53 DDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDR 112
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 113 EEARRKHTGGKILGFFF 129
Score = 89.0 bits (211), Expect = 9e-17
Identities = 42/52 (80%), Positives = 49/52 (94%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 256
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEI 51
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 113 bits (273), Expect = 3e-24
Identities = 52/71 (73%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDH
Sbjct: 220 DDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDH 279
Query: 76 EEARRKHLGGK 44
EEAR+KH G +
Sbjct: 280 EEARQKHTGSR 290
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -1
Query: 390 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEII 219
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 90.2 bits (214), Expect = 4e-17
Identities = 39/77 (50%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDH 77
D HR G+I V+L GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DH
Sbjct: 53 DPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDH 112
Query: 76 EEARRKHLGGKILGFFF 26
EEA ++++GG++LGFF+
Sbjct: 113 EEAIKRNVGGQVLGFFY 129
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = -1
Query: 396 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 256
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQV 51
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/76 (51%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -3
Query: 250 DHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHE 74
D R+GK +++L GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+
Sbjct: 53 DKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHK 112
Query: 73 EARRKHLGGKILGFFF 26
E +++GGKILG+F+
Sbjct: 113 ECLTENVGGKILGYFY 128
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = -1
Query: 393 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F +
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYI 51
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 82.6 bits (195), Expect = 7e-15
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DD +AG V L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M
Sbjct: 54 DDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQ 113
Query: 76 EEARRKHLGGKILGFFF 26
EAR K +GG++L + +
Sbjct: 114 YEARDKKIGGQLLAYVY 130
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFI 53
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 79.4 bits (187), Expect = 7e-14
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DD RAG V L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H
Sbjct: 54 DDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSH 113
Query: 76 EEARRKHLGGKILGFFF 26
+EA K +GG+++ + +
Sbjct: 114 KEAIEKGIGGRLIAYVY 130
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFI 53
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 79.0 bits (186), Expect = 9e-14
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDH 77
DD +AGK V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H
Sbjct: 71 DDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSH 130
Query: 76 EEARRKHLGGKILGFFF 26
EAR + +GG+++ + +
Sbjct: 131 YEAREEGIGGQVIAYVY 147
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 417 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
L M + ++AL + NAE G + P S +I L V+ GY+ FE V
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYV 70
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
++ R GK V L+ +N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H
Sbjct: 53 EEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSH 112
Query: 76 EEARRKHLGGKILGFFF 26
EAR+ +GGK+L + +
Sbjct: 113 IEARKLGIGGKLLAYVY 129
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGGI 86
DD RAGKI+V L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+
Sbjct: 54 DDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGV 113
Query: 85 MDHEEARRKHLGGKILGFFF 26
M H + R+ +GG LG+ +
Sbjct: 114 MSHRDGIREKIGGVTLGYVY 133
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYI 53
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 75.4 bits (177), Expect = 1e-12
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
++HR GK +V L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M
Sbjct: 53 ENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQ 112
Query: 76 EEARRKHLGGKILGFFF 26
++AR++ LGG +L + +
Sbjct: 113 KDARKQRLGGVLLAYVY 129
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = -1
Query: 402 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYV 52
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDH 77
+D R GK V+L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H
Sbjct: 54 EDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSH 113
Query: 76 EEARRKHLGGKILGFFF 26
EA + +GG ++G+ +
Sbjct: 114 HEAAERGIGGFLIGYVY 130
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHV 53
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1
Query: 417 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 280
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVI 188
DDHRAGKIVV L GR+NKCGVI
Sbjct: 116 DDHRAGKIVVELNGRINKCGVI 137
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = -3
Query: 250 DHRAGKIV-VNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDH 77
D GKI+ + L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ +
Sbjct: 53 DSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITN 112
Query: 76 EEARRKHLGGKILGFFF 26
EA+ + +GG ++ + +
Sbjct: 113 REAKEQKIGGVLIAYVY 129
Score = 36.7 bits (81), Expect = 0.48
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -1
Query: 399 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
++++D L + N ++G+ + P S +I+K + +M + GYI + +V
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLV 52
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3
Query: 274 HRRV*NRDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 155
HRR+ DDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 906 HRRIWFVDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 149
D+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 17 DNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 181 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 26
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3
Query: 247 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 95
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 399 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 256
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 393 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 262
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3
Query: 118 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 26
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_Q7M992 Cluster: ATP-BINDING PROTEIN; n=1; Wolinella
succinogenes|Rep: ATP-BINDING PROTEIN - Wolinella
succinogenes
Length = 815
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 348 SLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRHFIYLFKTCKTSMISPLHIV*IKRKKK 527
S F H L R R + + F ++ N I L K C+ + SP+ ++ + +K
Sbjct: 460 SRVFPHAPKTLLREHYRCHPKIIDFCNKKFYNGELIILTKNCEET--SPIVLIEAQSDRK 517
Query: 528 T*SFIYDLHSIC-LASH-STADASSLMYVAP 614
T S ++H IC ++ H S AD S ++P
Sbjct: 518 TESNKCNMHQICSISKHLSDADISDAACISP 548
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 118 GYLVLTTSGGIMDHEEARRKHLGGKIL 38
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_A2ERL3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 466
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 EIYNNLASSVIITISNSPM*PCFIITVKNLTMTLEQGLMRTCLFPRFSALCIDFK-ASLN 394
EI N +A + + + P P F ++ L+ +M+TC FP+F +D+ +S+N
Sbjct: 177 EIKNCIAYVICLLLKKIPDFPTF--ETSDILFALKPQIMQTCYFPKFCRRILDYSISSVN 234
Query: 395 TFIR 406
F +
Sbjct: 235 DFFK 238
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = -3
Query: 217 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 38
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182
Query: 37 GFF 29
G+F
Sbjct: 183 GYF 185
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 118 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 26
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 118 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 26
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,798,462
Number of Sequences: 1657284
Number of extensions: 11115661
Number of successful extensions: 21892
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21876
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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