Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0468.Seq
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 145 1e-34
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 145 1e-34
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 145 1e-34
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 145 1e-34
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 145 1e-34
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 145 1e-34
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 145 1e-34
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 145 1e-34
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 142 1e-33
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 0.001
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 104 bits (249), Expect = 3e-22
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEII 53
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 53 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 112
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 113 EEARRKHTGGKILGFFF 129
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQS-HRPVLTVMMKHGYIGEFEII 52
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 145 bits (352), Expect = 1e-34
Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (344), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
Frame = -3
Query: 253 DDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDH 77
DDHRAGKIVVNLTGRLNKCGVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDH
Sbjct: 54 DDHRAGKIVVNLTGRLNKCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDH 113
Query: 76 EEARRKHLGGKILGFFF 26
EEARRKH GGKILGFFF
Sbjct: 114 EEARRKHTGGKILGFFF 130
Score = 105 bits (252), Expect = 1e-22
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIV 253
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1
Query: 411 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 301
MV MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,889,675
Number of Sequences: 237096
Number of extensions: 1676591
Number of successful extensions: 2478
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2468
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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