Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0465.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   5.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   9.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 103 LNTWYMNCRLFIRRTSSNRLSNIVNLISY 17
           +NT+Y N  +F+R   SN  S+ ++ I Y
Sbjct: 27  INTFYSNKEIFLRELISNS-SDALDKIRY 54


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 72  NKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSE 170
           N R + YQVL FG + ++     + + VV G+E
Sbjct: 418 NGRSYTYQVLPFG-LKTAVGSFSRAMDVVLGTE 449


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 332 VSILCEQSGYPGPXL*XQQFLQ 267
           V++LC   G+P P     +F++
Sbjct: 250 VALLCPAQGFPSPSFRWYKFVE 271


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/23 (26%), Positives = 10/23 (43%)
 Frame = -1

Query: 386 YYCHLWLRTLLXHCSFHVVSILC 318
           Y    WL  +   C  H + ++C
Sbjct: 104 YKIGYWLHQICHICELHTIFLVC 126


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 62  AANEQAAVHVPSVKLWYD 115
           A+N  A +H+P+ +  YD
Sbjct: 48  ASNASAPLHIPAKRAAYD 65


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 386 YYCHLWLRTLLXHCSF 339
           Y   +W+ TL+  C F
Sbjct: 731 YIATVWICTLMNRCKF 746


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 366 KNFTXPLFFSCSFNTL*TIGI 304
           +NF   L F  +F TL TIG+
Sbjct: 439 RNFRKKLDFIFTFITLLTIGL 459


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 155 YHQTFPYHQGRR 120
           YHQ   +H GRR
Sbjct: 792 YHQQQSHHYGRR 803


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,869
Number of Sequences: 336
Number of extensions: 2057
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)