Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0464.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    27   9.8  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    27   9.8  
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ...    27   9.8  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
           protein F33H12.6 protein.
          Length = 1360

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 629 TIVDQKHSFHLDRPTHYT 682
           T VD +  F++D PTH+T
Sbjct: 710 TFVDSRQFFYMDMPTHFT 727


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 629 TIVDQKHSFHLDRPTHYT 682
           T VD +  F++D PTH+T
Sbjct: 816 TFVDSRQFFYMDMPTHFT 833


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 629 TIVDQKHSFHLDRPTHYT 682
           T VD +  F++D PTH+T
Sbjct: 816 TFVDSRQFFYMDMPTHFT 833


>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
           protein Y46B2A.2 protein.
          Length = 1365

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 629 TIVDQKHSFHLDRPTHYT 682
           T VD +  F++D PTH+T
Sbjct: 746 TFVDSRQFFYMDMPTHFT 763


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 629 TIVDQKHSFHLDRPTHYT 682
           T VD +  F++D PTH+T
Sbjct: 836 TFVDSRQFFYMDMPTHFT 853


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,825,573
Number of Sequences: 27780
Number of extensions: 256027
Number of successful extensions: 389
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)