Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0463.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 180 GNERKRKYAEFYRTYDAEKEF 118
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 180 GNERKRKYAEFYRTYDAEKEF 118
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 180 GNERKRKYAEFYRTYDAEKEF 118
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 553 KSLGKHRPFKNFSNLIV 503
           KSLGKH   K+F+ +++
Sbjct: 26  KSLGKHNLQKSFAKVVI 42


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 553 KSLGKHRPFKNFSNLIV 503
           KSLGKH   K+F+ +++
Sbjct: 26  KSLGKHNLQKSFAKVVI 42


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 553 KSLGKHRPFKNFSNLIV 503
           KSLGKH   K+F+ +++
Sbjct: 26  KSLGKHNLQKSFAKVVI 42


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 280 LLAVDTALSPAMSNYNFTEIKNAAAANSRPLGERHP 387
           LLA     SP +S+  F ++ + AAA+S  L    P
Sbjct: 100 LLANGYNHSPHLSHMQFMQLPHPAAAHSALLSPAMP 135


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 226 SNNNVTFDDGLRRPRI*GLLAVDTALSP 309
           SN ++  DD +RR +I  + A  T+ +P
Sbjct: 7   SNTHLHPDDAIRRAKIVKVAASPTSANP 34


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 226 SNNNVTFDDGLRRPRI*GLLAVDTALSP 309
           SN ++  DD +RR +I  + A  T+ +P
Sbjct: 7   SNTHLHPDDAIRRAKIVKVAASPTSANP 34


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 440  NSAXGASSHRRYRQHGSSGWRSPSG 366
            NSA  ASS R      ++G R P G
Sbjct: 933  NSASPASSDRSGTPRSTNGDRKPGG 957


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,569
Number of Sequences: 336
Number of extensions: 2913
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)