Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0463.Seq
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY029256-1|AAK32965.1| 77|Drosophila melanogaster cytochrome c... 62 6e-10
AE014134-909|AAF52241.3| 77|Drosophila melanogaster CG14028-PA... 62 6e-10
AY070808-1|AAL48430.1| 87|Drosophila melanogaster AT20031p pro... 47 3e-05
AE014134-976|AAN10559.1| 87|Drosophila melanogaster CG31644-PA... 47 3e-05
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 31 1.3
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 31 1.3
AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB... 31 1.3
BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p pro... 29 7.2
AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA... 29 7.2
AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC... 29 7.2
>AY029256-1|AAK32965.1| 77|Drosophila melanogaster cytochrome c
oxidase subunit VIc protein.
Length = 77
Score = 62.1 bits (144), Expect = 6e-10
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = -1
Query: 249 IKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 82
IKRN+ V+L L+ V +K L+ + +K YA+FY YDA K FE M+ G FQSC
Sbjct: 22 IKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKYDANKSFERMKAAGRFQSC 77
>AE014134-909|AAF52241.3| 77|Drosophila melanogaster CG14028-PA
protein.
Length = 77
Score = 62.1 bits (144), Expect = 6e-10
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = -1
Query: 249 IKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 82
IKRN+ V+L L+ V +K L+ + +K YA+FY YDA K FE M+ G FQSC
Sbjct: 22 IKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKYDANKSFERMKAAGRFQSC 77
>AY070808-1|AAL48430.1| 87|Drosophila melanogaster AT20031p
protein.
Length = 87
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 243 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 82
RN+ +A L+ +A F L N RKRKY FY TYD F+ M G SC
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73
>AE014134-976|AAN10559.1| 87|Drosophila melanogaster CG31644-PA
protein.
Length = 87
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 243 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 82
RN+ +A L+ +A F L N RKRKY FY TYD F+ M G SC
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 306 RKCSIDSEQASD-ARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDA 130
RK S D E+ AR Q + I L A +++ ER+R+ E RT D
Sbjct: 33 RKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDT 91
Query: 129 EKEFE-EMRKKGLFQS 85
EK + E RKK +F++
Sbjct: 92 EKRHQVEERKKAIFEA 107
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 306 RKCSIDSEQASD-ARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDA 130
RK S D E+ AR Q + I L A +++ ER+R+ E RT D
Sbjct: 33 RKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDT 91
Query: 129 EKEFE-EMRKKGLFQS 85
EK + E RKK +F++
Sbjct: 92 EKRHQVEERKKAIFEA 107
>AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB,
isoform B protein.
Length = 851
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 306 RKCSIDSEQASD-ARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDA 130
RK S D E+ AR Q + I L A +++ ER+R+ E RT D
Sbjct: 33 RKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDT 91
Query: 129 EKEFE-EMRKKGLFQS 85
EK + E RKK +F++
Sbjct: 92 EKRHQVEERKKAIFEA 107
>BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p
protein.
Length = 887
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 285 EQASDARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFE-EM 109
E+ AR Q + I L A +++ ER+R+ E RT D EK + E
Sbjct: 77 EKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDTEKRHQVEE 135
Query: 108 RKKGLFQS 85
RKK +F++
Sbjct: 136 RKKAIFEA 143
>AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA,
isoform A protein.
Length = 887
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 285 EQASDARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFE-EM 109
E+ AR Q + I L A +++ ER+R+ E RT D EK + E
Sbjct: 77 EKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDTEKRHQVEE 135
Query: 108 RKKGLFQS 85
RKK +F++
Sbjct: 136 RKKAIFEA 143
>AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC,
isoform C protein.
Length = 833
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 285 EQASDARSPQPVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFE-EM 109
E+ AR Q + I L A +++ ER+R+ E RT D EK + E
Sbjct: 23 EKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEI-RTRDTEKRHQVEE 81
Query: 108 RKKGLFQS 85
RKK +F++
Sbjct: 82 RKKAIFEA 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,016,595
Number of Sequences: 53049
Number of extensions: 565713
Number of successful extensions: 1387
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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