Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0461.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    44   0.002
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=...    35   1.1  
UniRef50_Q5JN13 Cluster: Putative uncharacterized protein P0403C...    34   2.5  
UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating ...    33   3.3  
UniRef50_Q3SIV6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1; ...    32   7.6  
UniRef50_A4R6U8 Cluster: Predicted protein; n=1; Magnaporthe gri...    32   7.6  

>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = -1

Query: 479 GRIGTGPPXEVDGIDKLDIEF 417
           G +GTGPP EVDGIDKLDIEF
Sbjct: 283 GELGTGPPLEVDGIDKLDIEF 303


>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=1;
           Mus musculus|Rep: Beta-D-galactosidase fusion protein -
           Mus musculus (Mouse)
          Length = 121

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 466 PGPPLRSTVSISLISNS 416
           PGPP RSTVSISLISNS
Sbjct: 21  PGPPSRSTVSISLISNS 37


>UniRef50_Q5JN13 Cluster: Putative uncharacterized protein
           P0403C05.2; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0403C05.2 - Oryza sativa subsp. japonica (Rice)
          Length = 403

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -2

Query: 418 SRPLRSDIAXXGVGGAXVRDPARLSAXGVGTARPRPHGVARGPARXRQALLPSHH 254
           +RP R  +      G  +  PA   A  VG   P PH V +G    R+ LL  HH
Sbjct: 230 ARPERGGVRHHPPHGVGLLQPAHGPAHPVGGLAPPPHEVRQGRPPQREHLLGDHH 284


>UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating
           factor DNA sequence; n=2; Eukaryota|Rep: Nicotiana
           tabacum (clone 5) activating factor DNA sequence -
           Nicotiana tabacum (Common tobacco)
          Length = 56

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -1

Query: 476 RIGTGPPXEVDGIDKLDI 423
           + GTGPP EV GIDKLDI
Sbjct: 20  KAGTGPPLEVRGIDKLDI 37


>UniRef50_Q3SIV6 Cluster: Putative uncharacterized protein; n=1;
           Thiobacillus denitrificans ATCC 25259|Rep: Putative
           uncharacterized protein - Thiobacillus denitrificans
           (strain ATCC 25259)
          Length = 345

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 25/73 (34%), Positives = 30/73 (41%)
 Frame = -2

Query: 469 GPGPPLRSTVSISLISNSRPLRSDIAXXGVGGAXVRDPARLSAXGVGTARPRPHGVARGP 290
           G G  +   V +  +  SR L S I    V  A +R  ARL A       P P G AR  
Sbjct: 106 GEGETVEWLVKMRRLPASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMGAARYR 165

Query: 289 ARXRQALLPSHHE 251
           AR  Q +    HE
Sbjct: 166 ARLAQQIAEPLHE 178


>UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1;
           Bacillus coagulans 36D1|Rep: GCN5-related
           N-acetyltransferase - Bacillus coagulans 36D1
          Length = 180

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -2

Query: 466 PGPPLRSTVSISLISNSR 413
           PGPP RSTVSISL+ NS+
Sbjct: 3   PGPPSRSTVSISLMFNSK 20


>UniRef50_A4R6U8 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 296

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 27/70 (38%), Positives = 29/70 (41%)
 Frame = -2

Query: 472 LGPGPPLRSTVSISLISNSRPLRSDIAXXGVGGAXVRDPARLSAXGVGTARPRPHGVARG 293
           LGP P   S+V     +  RP  S  A  G GG      A  S  G G  RP    VARG
Sbjct: 58  LGPHPG--SSVR-GRAARGRPRGSRAAQAGRGGRRAATAATGSQPGPGRGRPTRGRVARG 114

Query: 292 PARXRQALLP 263
             R R A  P
Sbjct: 115 STRGRPARPP 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,065,671
Number of Sequences: 1657284
Number of extensions: 6281226
Number of successful extensions: 16799
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16793
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)