Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0460.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.3  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.3  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    23   8.3  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.3  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 451 CNKYLVKNCGKDQFHIRMRLH 389
           CN +  K CGK   HIR   H
Sbjct: 497 CNLHRCKLCGKVVTHIRNHYH 517


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 263 HHVVRSSDRWKAQVIEALRRAKFKFPGR 180
           HH+  + ++ +  +I +LRR + K P R
Sbjct: 698 HHLQLAPEKTEGVMISSLRRGQLKVPFR 725


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 165 YVDLLTSGELELGT 206
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 210 QSLDDLCLPPVTRAHDMMGC 269
           ++++ +CLPP     DM  C
Sbjct: 69  ETVNTICLPPANHNFDMSRC 88


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 165 YVDLLTSGELELGT 206
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 272 WTAHHVVRSSDRWKAQVIEALRRAKFKFPGR 180
           W  HH+  + ++ +  +I +LRR   + P R
Sbjct: 692 WMRHHLQLAPEKTECVMISSLRRGHPEIPIR 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,794
Number of Sequences: 2352
Number of extensions: 14666
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)