BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0456.Seq (648 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical ... 32 0.40 Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 29 2.1 AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 29 2.8 Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 28 5.0 Z74045-3|CAA98551.1| 165|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 27 8.7 U10401-2|AAA19057.2| 386|Caenorhabditis elegans Hypothetical pr... 27 8.7 >AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical protein F17A9.2 protein. Length = 533 Score = 31.9 bits (69), Expect = 0.40 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 Query: 450 WPTALLHHAHHQVDPKETGSRLINQLMAHNVP 545 WP + H+H+Q + GS L+++L AH P Sbjct: 153 WPADIARHSHNQPSKPQPGSVLLSKLAAHLKP 184 >Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical protein C34B4.2a protein. Length = 345 Score = 29.5 bits (63), Expect = 2.1 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 275 RCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKIT 382 RC P A+ P+ ++ E+K +S G S + P++ T Sbjct: 224 RCPPQASIPAYYARVRMEETKAASSGNSTAGPIRAT 259 >AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily assigned gene nameprotein 63 protein. Length = 604 Score = 29.1 bits (62), Expect = 2.8 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +2 Query: 272 RRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKITPER 391 RR SPF++S ST+P +K+ + S F ES+ V +PER Sbjct: 220 RRRSPFSSSKSTAP-IKSRHYR-SRFSESLEDNVFRSPER 257 >Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical protein T03D8.6 protein. Length = 578 Score = 28.3 bits (60), Expect = 5.0 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Frame = +2 Query: 338 PSSFGES---VSAPVKITPERMAQEIYDEIKRLHR 433 PSSFG + VSA K+ PE +IY++ K LH+ Sbjct: 285 PSSFGVTQLIVSAMSKLFPEGHKDDIYNDPKVLHK 319 >Z74045-3|CAA98551.1| 165|Caenorhabditis elegans Hypothetical protein T27F2.4 protein. Length = 165 Score = 27.9 bits (59), Expect = 6.6 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = +2 Query: 284 PFAASPSTSPGLKTSESKPSSFGESVSAPVKITPERMAQEIYD-----EIKRLHRR 436 PF +S S G T+ S S ES +AP KI R QEI D K+ HRR Sbjct: 48 PFESSASL--GTSTTSSSRCSSTESSAAPGKIRRGRPQQEIADGQDAHSQKKRHRR 101 >Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical protein K03B8.7 protein. Length = 290 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 142 EYKKMKNNIKPHTGNTRKKYTIRFQVTVKSDVLN 41 E ++MKN I + N +K IRF ++SD +N Sbjct: 110 EVQRMKNEIMEISTNKTRKSEIRFSPPIESDRVN 143 >Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein ZK593.5 protein. Length = 1326 Score = 27.9 bits (59), Expect = 6.6 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 260 PTKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKITPER 391 P ++ P AS +T+P K S SKP + S P ++TP++ Sbjct: 175 PRRQSLAPPKKASTTTAPVSKPSLSKPRQ-SLAPSKPAEVTPQK 217 >Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical protein F09C8.2 protein. Length = 762 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 299 PSTSPGLKTSESKPSSFGESVSAPVKITPERMAQEIYDEIKRL 427 P + P L TS KPS + +AP+K P QE+ E ++L Sbjct: 477 PVSVPELLTSTKKPSQPAKVPAAPIK-APRLSDQELESESQKL 518 >Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical protein R06F6.9 protein. Length = 385 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 Query: 183 DFVGRKKKMACATLKRNLDWESKANY 260 DFVGR K A TLK E++ANY Sbjct: 72 DFVGRAKYDAWNTLKGQTQDEARANY 97 >U10401-2|AAA19057.2| 386|Caenorhabditis elegans Hypothetical protein T20B12.4 protein. Length = 386 Score = 27.5 bits (58), Expect = 8.7 Identities = 19/74 (25%), Positives = 36/74 (48%) Frame = +1 Query: 184 ISLGVKRKWRVLH*KEIWIGSLRRITYKEKKMFTICSKSKHKSWVKNIRIETIFIWRIR* 363 I +G + W+ L+ ++ I L+ + Y + +ICSKS HK + I ++++ I Sbjct: 23 IYIGGFKYWKFLN-EDCKIEVLKYLDYCSRCQLSICSKSDHKL----VSITPLYVYEIEI 77 Query: 364 CTCENYPRTHGTRD 405 E + T+D Sbjct: 78 SDNERSLHSTSTKD 91 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,668,870 Number of Sequences: 27780 Number of extensions: 340411 Number of successful extensions: 1128 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1128 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1434198608 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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